NAME_ID = RLC_Bianca_AF521177-1 CLASSIF = Retrotransposon, LTR, Copia COMMENT = complete element, (5 bp TSD) TREPACC = TREP1161 ORGANIS = Hordeum vulgare SIZEDNA = 7693 SSOURCE = AF521177 RELDATE = 01-OCT-2002 SUBMITT = Thomas Wicker REFEREN = Brunner et al.,Genetics. 2003 164:673-683. ANN_TSD = 1-5, 7689-7693 ANN_LTR = 6-176, 7519-7688 PROTEIN = PTREP51 >gnl|TREP|TREP1161 Retrotransposon, LTR, Copia, "RLC_Bianca_AF521177-1"; complete element, (5 bp TSD) CTCTATGTTAGGAATTAATTAAATGTATTAATTAATGGGATAATCCCTGC GTTGCCGGTTGCCTTGTTTTAGCAACCGTTCCTTGTAAACCGCCTCTGTA ACAGGGGTATAAATACCCACATCTTCAATCAATGAAAACACTGTTCCATC ATTCTGTCACTTTCACTACTTTACACGTTATCAGCGCTCGCTCTGCCGAG AGCGACAGAGAGCCAAGAGAAAGGTGAGAATGGCAGGGAGAGATTTGTCC TCGCTTGCTTTTGCTTTCGCACGTTTCCTGCAGAAAGAAGACAGCCGCTT CACTCGCACGCAGCGCCACCGCATTGCACGTCGCCGTCAGGGTCTTGGTG CAAGGAATGGCCCTCGCCGCCGTTCCTTCACCAGGAACCACCGCCAGAAC CGGAGTGGCCCTCATCGCCGCTTCTTCGCCGGGAACCACCGCCAGAACCG CCGCCGTGGGGCCATCAGCGTCGTTCCTCGAAGAAGATGTGATGTTCCCC TGTGAACTTGCGCCGCCGCCTCTTCCTCCATACTGCATGCAGCACGGATT CGGGCCATGCCCTGCGCGCACGGATGGCCACGTCCCGGAGCTGCCATCCC CGACGCCGGCAGCGGCAGCACACACCGGCCCCGTCCCGGATCTGCCATCT CCGACACCGGATCGAGAGGAACGAGGCGGTTATCCCACCATCCCCATCTT GAACATCCAGATCAAGGTTGAAGAAGAGGGGATGGAGGCCATGGGCTCGT CGTCGTCGCTCCGCCCTCCATCACCGGCGATACCTCCTCCTCCTCCGGCT CCGCCCCTTCCGCTGACGCCACCGCCGGAAGCTCGCCGGATCCTGTGCTA GTTCGCCGCTGCTATGGCGCAGAACCGGGCGGCTCTTCGTGGCGCGTGGT CGCCGGACGCCCTGGGCTTCGCCGGCGCACCGGAGGCAAGCAGCAGCGGG AGTAGCCGGGCTGCGCTGCGGGGCCAGCCCCGTTTTCCTTGAAGCAGCCA TGGGGAGAGGAGGCTGGAGTTGTGAGGTGTTTGGGTCTGCATCGGGAAGA AGATGGGAAACAGGAGAGAAGTGGCTGTGTGGCCTCGGCTTGCTGCCTTG CTCTCTCCCTTATCCATTTCTCCAACCGGTATATGGTCCAACACAGGCCA CGTCCACTCCAAACTCCAAGCCACGTTTTCCTCTCCAAAAGGCCTACAAG CCACGTTTCCTCTTCAAAAGGCATACAGGCCAGGAAATAAAGTGACTATT AGCGTTGTGTTTTAATCATAGTACTACTATGCTGCAATTACTATATTGCA CTGCAGATTGTTCCTTTTTATTTCAGTGTGATATGTTATTGTATTAAGAA CCTCTCCTTATCATATTCACTCGGTATTGTACTGTAGTATGAATACTTAG ATTGTATATTGTCTAAAATAAAGTCTCAGATTATGTGTACATATTCTATA TAATTGCCTCAGCAATTTTCATTTTTTTAGAATATGTAGTTTTCAAGTAC AATTTTTTTTTAATTCAAATTTTTGGGATCACAAGGTAGATGAGGCATCT ACTGCATTTTGCAGATTATCCTCATCGCTGAAAGATCTACATTTTGCCTT CGTTATTTTGGCAAAATGACTATCTTCGAGTGCTCTCCCGAATATGCGAA TTAATGTGACTACCTCAAATTTTTACAAATCACAAGGTAATTGTGTGATC TACTGCATAATTTGCAGATTATCCACTCTTGCTGAGAGGTCTACATCTAG TCTTTTGACAAGATGACTACCTTCAAAGTGTTTTTGTAAAATATAGTATG ACACAAGGTAATGGACTACGAACATCTACTGGTCAAAACCAGACTATGTT CTCCACTACTATGAGATCTACACCCCAACGGTGAATATTTTCGAAGTGTC ATATACATAAAATGAGGTCTACACATAAAGCATCAGCTATACTTGAAAAT TTTGCTTCCTAAAGCATTTGTTGTAACTTATATTTTACTCTCATAGTAAA ACTAAATTATGCATGAAAATACCATGCAGGAAATGGCTGGTGTCATGCAT CGTGAATTTCATGAACTTGAACTAGATGGTAGTATCTATTTACCATGGGC TATGGATGCAAAGATAGCCCTCGAAAGCCGTAAACTCGGTTTCACTATCA CCACACCCGTTGAAGGCGCCGGGAGAAATCCCCACGGCAGCCAAATATAG AGCTTTAAGTTTCTTAAGGCACCATCTCCATTCAGACTTAAAGTCGGAAT ATTTGATGGAAGAAGATCCACTGGTTTTGTGGAACTCTCTCAAGGAGAGA TATGACCAGCAAAGAGCAGTCATGCTGCCAGAAGCACAGAGAGAATGGTC CCTCATAAGGTTCCAAGACTTCAAATCTGTGGCAGCATATAACTCTGCAG TTCACAAGGTTAACTCAAAACTAAGGTTTTGCAATCAAGAAATTTCTGAA GAAGACCTTATTGAGAAGACCTTGTGCACTTTCCACCCCTCGATGAGGGT ACTACAATAGAAGTACCGTCAACAAAAATACAAAAAGTATTCTGAGCTCA TATACACTTTACTTCAGGCTGAGAAACATGATGAACTTCTCATGAAGAAT CATCAGACACGCCCAACGGGCTCAATGCCACTCCCTGAAGCACATGCTAA CACTCAGTTTACTAAAAAGTATGGGGGCAACAAAAAGAATTTCAAAAAAT TCAATGGAAAGTGGAAAAGGAACAACAAGCAGAAAAGCTTTGGTCAATCT AAAGGTAAAGGTCACTTCAAGAAAAATGACCGAAACACCAACTCCGAGAT TTGTCAAAGATGTGGATGTACTAACCATCGTACTAGTAAATGCCGAACTC CCAAGCATCTAGCGGATTTATACATCAAATCCACTGGGAAAGGCAAACAA GTTCATGGAAAAGCCGAAGCTCACTTCAACGCCTTACAACAAGAAGAAAA CCTTGAAGCTAGCACTTCTCAAAGCGCTCCTAAGGAAACAAGGCAGAAGG ATGAAGATCTTCTTGATGTTGGCAACATGATGGTGGAATACACCCAAGAC GCATAGAGATCTTATATAATCTCCACATCACTCATTTGATGTTATCAACT ATTTTATTGTAATAATGGATGTTATAATTTGTATAACTCTAAGTAGAATA AAAGTCCTACGGACCAATCGTATTATGTAATTCAAACATAATGTCATATT TATATTTGTAACTGTAATATGAATACTTTGTATGTATATATTTATATGTG AGTAATATGAATAAAGTTTCATCCTAAAATATTCTTTTACTCTATATAGA TTTTACGGGAAAATAATCCAATGGAAGAAGAATTATGTTTGGTGGACAGT TGTACCAGTAACACAATATTAAGGGAAATAAAATATTTCCAAACTCTAAC TAAGAGAAAAGGGAATATTATGACCATTGACAGTCGCGATGCGTCGATTA TTGGTTCAGGACGAGCCACACTCGTTCTACCTATGGGTAGTACAATTGCA ATTGAGGATGCACTATTGTATCCTCAATCTACACGCACTCTTCTAAGTTT CAAAGACCTCAGATCAAATAACTTCCATTTGGAAACAATATCTGAAAATA ATTTTGAACATTTGCTTTTAACAAAGAGTAATGGGTCTGAGAAACAAATT CTTGAGAAATTCCCCTCACTTTCATCTGGATTATATTACAGTTATATAAA ACCCGTACCACATGTTGCGTACAAAATAATTTTTCAAGATCTTGATAAAT TCAAGACTTGGCATGATCGCCTAGGTCATCCTGGCGTAGGGATGATGACA AAAATTATTGACAATTCTATTGGTCACAGCCTTCCAACTATCAATTTCTC AAAATTATCAGATTTTGTGTGCACCGCATGTGCAACTGGAAAATTAATTA TAAAACCATCTTATCTTAAAGTTAAAAATGAGTCATTAAATTTTCTTGAA CGCATTCAAGGAGATATATGTGGTCCAATTCAAGCACTATCAGGACCTTT TAGATATTTCATGGTGCTCATATATGCATCTACTAGATGGTCACATGTGT GTCTATTGTCCACACGAAATCATGCTTTTTCCCAGCTTATTGATCAAATT ATCAAATTAAGAGCAAATCATCCTAAAAATAGGATAAAAACAATTCGAAT GGATAATGCCGCTGAATTTTCTTCACGTGCATTCAATGACTATTGCATGG CTATGGGCATTCATTTAGAACATTTTGTGCCTTATGTTCATACTCAAAAT GGTTTGGCTGAATCTCTCATCAAAAGAGTAAAATTAGTTGCTCGACCACT ATTACAGAATTGTAATTTACCAGCATCATGTTGGGCACATGCGGTATTAC ACGCCGCAGATCTGATACAAATCAGACCAACTGCATATCATACAACCTCC CCGCTACAACTAGTACGTAGCACTCAGCCAAGTATTTCCCATCTACGAAA ATTCGGTTGCGCAGTATACGTACCGATATCACCACCGCAGCGTACATCCA TGGGCCCCCACAGAAAACTAGGGATCTATGTGGGTTATAACTCTCCGTCA ATAATAAAATATCTTGAACCTCTTACAGGGGACCTGTTTACTGCCCGCTA CGCTGATTCAATTTTTGATGAGGACCATTTTCAGGCATTAGGGGGAGAAT CAAACCACAAAGAATGCCAGGAAATAGATTGGAATGTAACAGGCATTCAG TCCTTAGATCCACGTACTAAAGAATCTGAAACTGAAGTTCAGAGGATCAT AGATTTGCAACATATTGCAAATAATCTGCCAGATGCATTTACTGACCATA AAGGTGTCACTAAATCACATATTCCCGCTGTTAATGCACCAGAACGAGTG GAGGTACCAACTAAAACCACTCAAACCACAAATGAGAGTAAGAGGGGGAG AAATCTGGTTAGTCGGAATATAGCTTCTCAAAAGCCTCCGCGGAAACAGA GGAAATCAAATCCTCTACCAGTAAATGCAATTCAACCTCAAGTTGAAGGA CACCAACCAGATGCTCAACATCTTGAACCTAGCATAAATGCGCATAAAAA CATAATTGCTGGGACATCGGGACACCATGGTTCTATTGTTGTGGGAAATC ACATAGAGTCTGAAGGTATAAAAGAAATTTCCATAAACTATACAGATTCA GGAGAATCATATAATAGAGAGACTCCAATTGTCGACATATATTTCGCCTC TAAAATTGCTGAAACCCTTCAAGTGGATCCAGAACCAAAGACCGTCAGGG AGTGCCTCAAGCGTCCTGATTGGCCTAAATGGAAGGAAGCAATTGAGGCA GAAGTGCGCTCGCTCAACAAAAGAGAGGTATTTTCCTCGGTAATACCTAC TCCTCATAATGTATTCCCTGTTGGAGCAAAATGGGTTTTTGTTCGAAAAA GGAATGAAAACAATGAGGTGGTGAGATACAAAGCGAGGCTTGTAGCACAA GGGTTCACGCAGAGGCCCGACATCGATTACGATGATACATACTCTCCTGT AATGAGTGGAATAACGTTTCGATACTTAATATCTTTGGCAGTACAAATGA ATTTATCTATGCAGTTGATGGATGTAGTGACAACATACTTATATGGGTCA CTCAAATCGGACATATATATGAAAGTCCCTGAATGACTTAAAATGTCGAA TCCAAAAGAAAATCGCAACGCATATTGTGTAAAATTACAAAAGTCACTAT ATGGCTTAAAACAATCGGGTAGAATGTGGTATAACCGATTGAGTGAGTTC CTTATTCAAAAAGGCTACTCAAATAATGATGATTGCCCTTGTGTATTGAT AAAGAAATCCTCAAATGGATTTTGCATCATCTCAGTGTACGTTGATGACC TCAATATCATGGGAAGTACACCTGATATCGAAGAAGCACACAATCATCTA ATGGCGAATTTGAGATGAAAGATTTGGGAAAGACCAAATTCTGCTTAGGC TTACAGCTTGAGCATCTTCCCTCGGGAATTTTAGTATACCAACCTGCATA TATTCAAAAGGTTTTGGAAAATTTTAATATGGATAAATCATATCCAACCA AAACACCCATGGTTGTCAGATCCCTTGATATGAATAAAGATCCTTTTAGA CCTCGGGATGATGACGAAGAGATATTAGGACCTGAGTTCCCGTATCTCAG TGCCATTGGTGCGTTAATATACCTTGCAAATTGCACCAGGCGTGATATTG CATTTACAGTGAATTTACTAGTTAGACATAGCGTTGCTTCATCGTAACGT CATTGGACGGGAGTAAATAATATCCTTAGATATTTACATGGCACAAAGGA TCTTGGCTTATTCTATCAGATAAACCAAGATATGACTATGGTAnGATATA CTGATnGCTGCTATCTATCTGATCCTCACAATGTCAGGTCACAAACAGGT TTCGTTTTCTTATATGGTGGAACTGCTTTTTCATGGAAGTCAACAAAACA GACTCTCCTAGCAACCTCCACTAATCATTCCTGAACTTGTTGCATTTTTT GAAGCATCTTAAGATTGTGTATGGCTTCGCAGGATGATTAACCCTATTCA AACTTCATGTGGTGTTGGTTCATTAGGATCACCAACTATTATATATGAAG ATAATGCAGCCTCGCCATTGTCTCAAAATGCAAATGTGGTTTATGTTAGA AAGTAATATCCCCACACCTATATTCTTCCTAAGGTTATTTTAATCCTCAG TGCATTACAGAAGGGATGGAGAAATTTGATATTTTCCCAAATTAAATCAT GTGCCAATTTAGCAGATTTGTTCCCCAAGTTTTTTCCAAATTCAACGTTC CAGAAATCCATTCATGGAAATTGGTATAGAGATGATTCCCGAGATTTGCA AAGTTCAGGGGGAGAAATCTCCCTGAAAATATACCCGTTTAATTATCATC AGGTAATGAATATTGTACTCTTTTCCTTTATGAGTTTTTCCAACAGGGTT TCTCATATAAGGTTTTTAACGAGACAATTAAATACAAGTATTGATGCATG CCATATCATATTTCTCCTTATATTTTTCCTACTAGGTTTTAAAGGAGTTT TTTATGGCACATCTCATTGCACTCTTTTCATTATGAGTTTTTTTGACATT TTCTCTCATAATGTTTTTAATGAAGCCATATCTTATCAATGATCATATAT CATACTTTCTATTTTCCCTATCGGGGTTTTAAAGGAAGTACTCAAGACAT ATATTGTTCTCTAAACTCAAAAATGAGTTTTATCCCTATATAAAGGTTTT CTCAAATGAGTTATCATGAGGCAATAATCATTATATGTTGCACAATTTTT TCCTTATTATTTTTCCACTGGGTTTAAAGGAGTTTTAGCAACATATCTAC ACTATTGTCCTTATATTTTTTCCACAGGGTTTTTGGAGGAGACTTTAAAG ATTATACAACGACTTTTCAAGATGAAGATGAGGAACATTCTTAAAGAGAA AAATTTACAAGGATTATTATTTATCAAGATGATGCACATTTACACAGACA AGCATGGATTAGGGAGAGTGTTAGGAATTAATTAAATGTATTAATTAATG GGATAATCCCTGCGTTGCCGGTTGCCTTGTTTTAGCAACCGTTCCTTGTA AACCGCCTCTGTAACAAGGGTATAAATACCCACATCTTCAATCAATGAAA ACACTGTTCCATCATTCTGTCACTTTTACTACTTTACACTCTA