NAME_ID = RLC_Ikya_AY853252-1 CLASSIF = Retrotransposon, LTR, Copia COMMENT = complete element (5 bp TSD) TREPACC = TREP2016 ORGANIS = Hordeum vulgare SIZEDNA = 6838 SSOURCE = AY853252 RELDATE = 20-AUG-2005 SUBMITT = Marion Roeder REFEREN = Cossu et al., unpublished ANN_TSD = 1-5, 6834-6838 ANN_LTR = PROTEIN = PTREP110, PTREP126 >gnl|TREP|TREP2016 Retrotransposon, LTR, Copia, "RLC_Ikya_AY853252-1"; complete element (5 bp TSD) GTTTGTGTTAGGTTGATCTCTTCCGTGTGGGCCCAACGTCCCACCGGGCC CTTGATCTATGCGCCCTGATCGGGGGCGCCCAACCCGTTATGGTTGGTGG GCCCCTCTGACCTGCGCTATATATAAAGTGGTGGGGGCCGGGGCGCACGG TACGAGGTTCACCGCGCCGCCAGACTCTCCACCTAAATCCCCTTCCGATC TAGGGTTAGCGCAGTGCTTACGGGAAGCACCACCCACGACCACACCTCTT CCCTCACGCCACCGATGACTACACCGGCACTGATGGCCGGAGCAGGGAGT TCCTCGGGCTCGGGACTAGGTGAGTAAAAGGTTTCACCGGATCTATCTAT GCCTAGTCGATCTACGGCTTCTACATTGGTATCAGAGCCACTAGGCAGAG ATTTATTCGGTACAAAGAAAAGAAAGCATTTGTTCCCTCCCCCTACGAAC CCTAGATGGGCAAGGCACCGAGGATGGCTACGGCCTCGTCGGAAAAGAAG CGCCGCCGCAAGGCCGCGCCTTTTCCTCTCGATCCCCACACGCATCGGCA AGCCGAGGTGAGGGGAAGAAGAACCTACCCCCTCGGTGGCTAAGTATGGA TCAAGATCCAAAAGAAGATCGGATTGAAACCGACAAAAGACAACAAAAAG AGAGGGGGAACTATGCAAAACAAAGGAAAAGGGCGCCACTACCGAACCGT TTGACGGCGGCGCGTTCACCCTAGAGGTGCTCGCGCAGCCGGCAAAGGGG ACGGAGATGGCGCCATCGAACTGCTCAAGGGTGAAAAGAACAGCAGGGTA GTTGGCATCCCAACACCTCCCTTGACGGCGGTGCACTCTCCCTCGGGAGA GGGCGCGCACCGGCAAGGGGAGTAAAGGGCGTCGCCGCTGCGATAGGAAA GGGGCACGGCCACAAGAAAAAAAAGAAGAAAAGGGGCCATATCCGAGCAG GGCAGAGAGCCACCGCGGGATCCCTCTCGGCGGGGCCTGAGAGCCACCGC GCGAAGAGAGGCCACCTCGGCGGGGCCTTAGAGCCACCGCGCGAGGGAAG GACCCGGCTCCCCGTCGGCCAACCCCGACGGCCTCCTCCTCGGCGAGGCA GACGGCGCACGGCGCGGGGCCCTCGGCCACCACAGCCGGCGGCCACCGCC CGGCCAGCACACGGCGGGGCTTAGAGCCACCGCGCGGAGGGTCCGGCCCA CCGTCGGCCATGCCCGACGAGAGGAGGAGCCGCTCTCGGTCTCTCTATAG GGAGAGAGAGGGAGGAGAAAAGGGATAGAGCGGCGCCGGGAGGAGAAAAT GAAAACGGCTAGGGTTTTCGGCTGGTGCAGTTCGGGTTTTAACCCAGCGA TGCTTGCACCCGGCCGTCGGATCTAATCCGACGGTCCAGGGCAAAGACCT AAGCCGCCAACGGGCCAAAAGGGGGAAAGGCCACGGGCCGAAAGGAAAAG GCCTTAGGCCGGCGGGAGGCAGGCCGGCCCAGGCCAGGCCAAACTGGCGC AACGACCTGCGGGCGCGCAAGGCGAAATGGGCCTTCGGGCCAAAAGCAGA AAAAGCCCCAGGGCCGGCTCCTTTTTTTAGGTTTTAAAGGATTTTTCGTT CTCTGTCTATATAGACAGATATAAAAGTGTTTTCTAAACGTTTTTTATAT AAAAATATGTTTAGAAAAATAGAAAGTAAAAATGTTCAAAGTTTCTGTGA ATATTTACAGAATTGTTATATATTTTTTCTATAAAGAAAAGTAGAAAGTA TTTTGAGAATAAAATAGCTTTCTCAGAAAAGGGATAGTTCATGAATTTGA TAAAAGCATTAATAAAGTTCATGAATTTTATTTTCAATGTCAGAATTATT TTCTGTAAAGTTAAGAGGCACATGAAATTTTATTTCACGTTTTCCGCTGC TAAAAGCAATATGGAATATGATCATGTTGTTATTCTGACCGACGTTGTTT AATCACACGGTCATATTGCATATTGCAAAATGATGCATTTATTTCTATCA TTTGCCCAACGGTAATGTAGATTAATATGCATAGGAAATTATATGATTAT TTTAACCAACGTTATTTAATGCATATGATTGTCGTACTGACTTCACTTAT TTGGTGATTTCAGGAGGTTTCCATTTGATGAGTTGCCTCAAGAAAATTCC GACACTCAGGGGGGACAACTACTCTGAGTGGAGGAAGAAGGTGGACATGG CCCTCTGCATTGCAGAGGTGGACTGGGTTCTGGAGGAGCCACAGCCAGCT GGACCTGCAGACCCAGTCAGAGAGACTGTTGAGGATGATGAGAGCTGGGA CAAAAAGAAAGGAAATTATGAAAAAAGAGGTGATGTCCCACTCCATCAGC AACATGCCATGGTTAAATGCCAACAAGAAATGTTTGGCGTTTATAAAGAA CACCATTGAGACCACTATCGTGGGATCAATTGCTGATTGCCCTACGATAA AAGAAATGCTGAATAAGATAAAGAGTCAGTTTACTGGCTCTTCTAAGACG TATGCCACCCAGTTGATCAAACAGCTGGTGACAGAGAGCTACCATGGTGC TGGCCATGGCATAAGGGAGCACATCCTTAGGATGAGCCACACGGCGGCTA AGCTCAAACCTATGGATGCGGATCTGGAGATAAAACCAGCTCTCCTTGTC CATCTGGTGATGGCTTCTTTGCCTAAGGAGTTCGAGACCTTTGTTGTTAA CTACAACATGCAGCCTGAGACTTGGGACATAGAAAAGGTCATCGCAATGT GCACTCAGGAGGAGGAGAGGATTAAGGCCTCACATGGTGGCACTATTAAC TATGTGAAGGAAAAGAAGAAGGGTTTTCCGCCCAACAAAGCTTCTCCCTC CAAGCCACAGGGCAATGGCAATGGCAATGGCAATGGCAATGGCAATGCTC ATGTCCATTATCAGCATAGGCACATTCAAGTGGACAGGGAAACTTGCGTC CACTCTAAGGAGAAAGGGCACTACAAGAAGGATTGCCCTGTTTTTCTAAA GACCTTCATGGCGAAGAGAGGTAAAGATATAGTTTCGTTTGTAAATGAAT CCTTGTATACAAAGTTTATGAAATCTACTTGGTGGATTGACTCAGGAGCA ACTGTTCATGTTGCAAATTCTTTACAAGGATTCAATTCGACGATAACTTT GCCAAGAAATTCAAGAGGAATTGAAGTTGCGAACGGTGTGCAAGCCGAAG TTGAAGCTGTGGGTGACGTCTCCTTGGAGCTAGCCGGTGGTTTCAAACTT CTTCTTAGGGATGTGCTTTTCGTACCTTCATGTAATAAGAACTTAATAAG TGTTTCCTGTTTAGACAAAGACGAATATCAATGTTTCTTTGGACATGGCA AATGTGTCATTTGGTCTCATAATGATTATGTTGGGGATGCATTTCTTCAT CATGAGCTTTATTTATTATCGCTATGTGAAAAAGCGCCCTATGTGTTGAA TGTGAATGAACAAAGTACTTCGTCGAACAACGATCAAAAGAAAAGAAAAA GAACTCACGACTCCTCAAAGCTATGGCACTGTCGATTGGGCCATATTTCC AGGGGGAGAATAGAAAGATTAATCAAAAATGAAATTCTCCCAAAGTTTGA GTTCTCTGACTTAGAACAATGCGTGGATTGCATTAAAGGGAAATATGTAA AACAGATAAAGAAAGGAGCAAACCGAAGCACAGGAACACTGGAAATTGTC CACACTGATATTTGTGAACCGTTCCCGGTGAAAAGTGTGGATGGTTATGT TTCATTCATAACGTTCACAGACGATTACTCCCGCTTCGGTTACATTTATC CAATCAAAGACCGACATGAAGCATTGGATAAATTCAAAATATTCAAAGCT GAAGTTGAAAATCAGCTTGATAGAAAGATTAAGATAGCGAGGTCTCACCG TGGGGGGAGTACTACGGTCGACACACTCCATATGGCCAAGTCCCTGGACC TTTTGCAAAATTCTTGCAAGAGACTGGCATAGTTGCCTAGTATTCCATGT GGGCGAGCCTCAGCAAAATGGAGTACCTGAAAGGCGTAACCGTACTCTCA TGGATATGGTACGCAGCATGATGAGCTACTCAGACCTTCCGTTGGGATTG TGGATGGAGGCGCTTAAAACCGCCATTCACATTCTCAACAGAGTTCCAAG CAAGTCGGTGCCCAAAACACCGCACGAGCTCTGGACAGGAAGAGTGCCAT CCCTTCAGCACTTAAGAGTGTGGGGATGCCCTGCGGAGGCCAAAATGTTT AATCCAAATCTTGGAAAGTTAGACCCGAAGACAGTGAGTTGCCATTTCAT TGGCTACCCTGATAGGTCAAAAGGTTTTTGTTTCTACTGTCCAGACAGAT ACACAAAGTTTGTGGAAACGAGACATGCTGTCTTCTTAGAGGACGAGATG ATGAGGGGGAGCCGGGTAGCTCGGAAAATTGATCTTGAGGAGAAAAGGGT GCATGCACCGATTCCGATGATTCAAGACCCATTTTTCTCACTACCCGCCG TAACTCCAACCATGACAACTGCGGGAGAAGACCCGGAACCTGTCCTTCAG GAGCCGACTGAACCCGTTGTTGATCATGAATTGGAAGTGCAGCAAGAATT AGTAGAAAGTGTGCCCGACAATGCGGCACTTAGAAGGTCTAATAGAACAA GAAGACCCGCTATTTCTACTGATTATAAAGTATACAATACAGAAATGGCC CACATGGAAGGTGATCCCACCACTTATGAGGAGGCCATTAAAAGCCCTCA CTCATCAAAATGGATAGAGGCAATGGAAGATGAGATGAAATCGATGAGTT CCAATCATGTTTGGGACTTAGAGATTATTCCTAAAGGAGCAAAGACAGTA GGCTGCAAATGGGTCTACAAAACAAAGTATGACTCTAATGGGAATGTAGA CAAGTATAAAGCCCGACTTGTGGCAAAAGGATTTACACAAAGAGAAGGGA TAGATTACAATGAGACCTTTTCTCCGGTCTCTTGTAAGGATTCCTTCAGA ATCATAATGGCACTAGTTGCTCATTTTGATTTAGAGCTGCATCAAATGGA TGTAAAGACGGCGTTTCTAAACGGTGATTTAGAAGAAGATGTCTACATGA AACAACCCAAGGGTTTTATCATGGAAGGCAAGGAAGATCTAGGTTGCCGT CTAAAGAAATCCATTTATGGGCTAAGGCAAGCCTCTAGACAATGGTACAT CAAGTTCAATGATACCATTAAAAGATTTGGATTCCAAGAAAATGTTGAGG ATAATTGCATTTATGCTAAGTTTAAACATGGGAAATATATTTTCCTAATC TTGTATGTGGATGATATCTTGCTTGCAAGCAATGGTATTGGTCTACTACA AGAGACAAAGAAGTTTTTATCCTCACATTTCGACATGAAAGACCTTGGTG TAGCTTCATATGTTTTGGGCATTGAAATTCGCCGAGACAGGAAGAATGGA GTCTTAGGACTCTCACAGAAAGCATATTTAGAGAAAGTTCTCCAAAAGTA TAATATGCATAAGAGCAAAGCCACACCTGCTCCCATAGTCAAGGGTGATA GTTTTGGGAAATATCAATGTCCCAAGAATCAGTATGAGCTCAATGAAATA AAAACAGTACCGTATACTTCGACTGTTGGAAGTTTACAGTACGCACAAGT GTGCACACGCCCTGACTTAGCTTTTATCGCCGGAGTACTTGGTAGATATC AAGCAAATCCAGGCCAAGAGCACTGGAAGATGGCAAAGAAAGCTTTGCGT TATGTGCAAGGCACAAAGGAAATCATGCTGACATATAGGCGATCTGATTC CCTAAAGATAAAAGGGTACTCCGACCCCGATTTTGCCGGAGATAGAGATG ATAGAAAATCCATGTCTGGGTACGTGTTCACTCTCGCAGGGGGAGCTATT TCATGGAAATGCTCTAAACAGACCATAGTTGCATCGTCTACGATGCAAGC AGAGTTCATAGCATGTTTTGAAGCCACCGGGCAGGTGATATGGCTAAAGA AATTTATACCCGACTTGAAAGTGGTAGCTTGTATCCACAAGCCACTAAAG ATATACTGCGACAACCAGCCCGCAGTATTCTACGCTCACAACAACAAGTT CAGCAATGTTGTCAAGACAATAGATATAAAGTATTATGTTGTGAAAGATA AAATCCAGGATCAAACTATAAGTCTCGAGCATATAAGTACGAAGTATATG CTTGCGGATCCGCTAACGAAAGGCTTACCACCCAGTGTGTTCAACGAACA CTTAGCCGGCATGGGTTTGATGGAAAGCCTATGATCCCTGGACAATAAGA GGCCCAGAAGCAAATGAATTTGTTTCAAAACAAAAGGTGTGTTGTGGCTG TATGATTCTATCGGCAATTAAGCTGTGACGATGAGACATGCTCTACACGC CTATATGTGATGGAAAAAATAAAAGTATAAAGTCAAAGTGAAAGTTGAAA TCAAGGGGGAGAATGTTAGGTTGATCTCTTCCGCGTGGGCCCAACGGCCC ACCGGGCCCTTGATCTATGCGCCTTGATCGGGGGCGCCCAACCCGTTATG GTTGGTGGGCCCCTGTGACCTGCGCTATATGTAAAGTGATGGGGACCGGG ACGCACGGTACGAGGTTCACCGCACCGCCAGACTCCCCACCTAAATCCCC TTCCGATCTAGGGTTAGCGCAGTGCTCACGGGAAGCACCACCCACGACCA CACCTCTTCCCTCACGCCACCGACGACTACACCGGCACTGATGGCCGGAG CAGGGAGTTCCTCGGGCTCGGGACTAGGTGAGTAAAAGGTTTCACCGGAT CTATCTATGCCTAGTCGATCTACGGCTTCTACAGTGTG