NAME_ID = RLC_BARE1_Z17327-1 CLASSIF = Retrotransposon, LTR, Copia COMMENT = complete element (5 bp TSD) TREPACC = TREP100 ORGANIS = Hordeum vulgare SIZEDNA = 8969 SSOURCE = Z17327 RELDATE = 01-OCT-2002 SUBMITT = Thomas Wicker REFEREN = Manninen et al., Plant Mol. Biol. 22:829-846(1993). ANN_TSD = 1-5, 8965-8969 ANN_LTR = 6-1834, 7109-8964 PROTEIN = >gnl|TREP|TREP100 Retrotransposon, LTR, Copia, "RLC_BARE1_Z17327-1"; complete element (5 bp TSD) CGAACTGTTGGAATTATGCCCTAGAGGCAATGATAAATAATTTATTATTA TAATTCATGTATCAAGATAATCGTTTATTATCCATGCTATAATTGTGTTG AATGAAGACTTAGATACATGTGTGGATACATAGACAAAATACTGTCCCTA GCAAGCCTCTAGTTGGCTAGCCAGTTGATCAAGGATAGTCAGGGTCTTCT GGCTATGTACAAGGTGTTGTTGCTTGATGACTGGATCACATCATCGGGAG AATCATGTGATGGACTAGACCCAAACTAATAGACGTAGCATGTTGATCGT GTCATTTTGTAGCTACTGTTTTCTGCATGTCAAGTATTTATTCCTATGAC CATGAGATCATATAACTCACTGACACCGGAGGAATGCTTTGTGTGTATCA AACGTCACAACGTAACTGGGTGGCTATAAAGATGCTCTACAGGTATCTCC GAAGGTGTCCGTTGAGTTAGTATGGATCAAGACTGGGATTTTTCACTCCG TGTGACGGAGAGGTATCTCGGGGCCCACTCGGTAATACAACATCACACAC AAGCCTTGCAAGCAATGTGACTTAGGGTAAGCCACGGGATCTTGTATTAC GGGACAAGTAAAGAGACTTGCCGGTAAACAAGATTGAAATAGGTATGCGG ATACTGACGATCGAATCTCGGGGCAAGTACCATACCGAAGGACAAAGGGA ATGACATACGGGATTATATGAATCCTTGCCACTGAGGTTCAAACGATAAG ATCTTCGTAGAATATGTAGGATGCAATATGGGCATCAAGGTCCCGCTATT GGATATTGACCGAGGAGTCCCTCGGTCATGTCTACATAGTTCTCGAACCC GCAGGGTCTGCACACTTAAGGTTCGACGTTGTTTTATGCATATTTGAGTT ATATGGTTGGTTACCGAATGTTGTTCGGAGTCCCGGATGAGATCACGGAT GTCACGAGGGTTTCCGAGATGGTCCGAAAATGAAGATTGATATATAGGAT GACCTCATTTGATTACCGGAAAGGTTTCGGCATTACCGGGAATGTACCGG GAGTGACGAATGGGTTCCGGATGTTCACCGGGGAGGGGGGGCAGCCCACT CCAGGGAAGCCCATAGGCCTTAGGGGTGCCACACCAGCCCTTAGTGGGCT GGTGGGCAAGCCCAAGAAGGCTCCTGCGCAGGATAAGAGAAAATCAAACA GAAAAGGAAAAAAAAGGGAAGTGGGGAAAGAGAGGAGGACTCCACCTTCC AGTCCTAGTTGGACTAGGATTGGAGGAGGAATCCTCCTCCCCCCTTCGAC CGAACCCCTTGGGGCTCCTTGAGCCTCAAGGCAAGGCCCCTCCCCTCCCT CCTATATATACTGAGGTATTAGGGCTGATTTGAGACAACTTTTCCACCGC AGCCCGACCACATACCTCCACGGTTTTTCCTCTAGATCGCGTTTCTGCGG AGCTCGGGTGGAGCCCTGCTGAGATTAGATCACCACCAACCTCCGGAGCG TCGTCAGGCTTCCGGAGAACTCATCTACCTTTCCGTCTCTCTTGCTGGAT CACGAAGGCCGAGATCACCATCGTGTTGTACGTGTGCTGAACGCGGAGGT GTCGTCCGTTCGGCACTAGATTAGAGCGGATCGTGGGACGGATCGCGGGA CGGTTCACGGGGCGGATCGAGGGACATGAGGACGTTCCACTACATCAACC GCGTTTATTAACATTTCTGTTATGCGATCTACAAGGGTACGTAGATTTGA AATCCCCCTCATAGATGGACATCACCATGACAGGTCTTCGTGCGCGTAGG AATTTTTTTGTTTCCCATGCGACGTTCCCCAACATTGGCATCGTGAGCTA GGTTCATGCGTAGATGTCATCTCGAGTAGAACACAAATTTTTTTGTGGGC GGTGATGTGTGATTTGCTGCCCTCCTTAGTCTTTTCTTGATTCCGCGATA TTGTTGGATCGAAGCGGCTCGGACCGACATTACTCATACGCTTACGAGAG GCTGGTTTCATCGCTATGAGCAACCCCGTTGCTCAAAGATGACTGACGAG TGTCGGTTTCTCCAACTTTAGTTGAATCGGATTTGACCGAGGAGGTCCTT GGATGAGGTTAAATAGCAATTCATATATCTCCGTTGTGGTGTTTGCGTAA GTAAGATGCAATCCTACTAGATACCCATGGTCACCACGTAAAACATGCAA CAACAATTAGAGGACGTCTAACTTGTTTTTGCAGGGTATGCTTGTGATGT GATATGGACGACGATGTGATGTGATATATTGGATGTATGAGATGATCATG TTGTAATAGTTAATATCGACTTGCACGTCGATGGTACGGCAACCGGCAGG AGCCATAGGGTTGTCTTTAAACTAATGTTTGTGCTTGCAGATGCGTTTAC TATATTGCTAGGATGTAGCTTTAGTAGTAATAGCATGAGTAGCACGACAA CCCCGATGGCGACACGTTGATGGAGATCATGGTGTGGCGCCGGTGACAAG AAGATCATGCCGGTGCTTTGGTGATGGAGATCAAGAAGCACGTGATGATG GCCATATCATGCCACTTATGAATTGCATGTGATGTTAATCCTTTTATGCA CCTTATTTTGCTTAGAACGACGGTAGCATTATGAGGTGATCTCTCACTAA AATTTCAAGACGAAATTGTGTTCTCGCCGACTGTGCACCGTTGCTACAGT TTGTCGTTTCGAGACACCACGTGATGATCGGGTGTGATAGACTGAACGTT CACATACAACGGGTGCAAAACAGTTGCACACGTGGAACACTCGGGTTAAG CTTGACGAGCCTAGCATGTGGAGACATGGTCTCAGAACACATGAGACCGA AAGGTCGATCATGAATCATATAGTTGATATGATTAGCATAGGGATGCTTA CCACTGAAACTATCCTCAACTCACGTGATGACCGGACTTGAGCTAGTGGA ATTGGATCATGAACCACTCAAATGACTAGAGATATGTACTTTTTGAGTGG GAGTTTAGCAAGTAATTTGATTAAGTTAAACTCTAATTATCTTGAACATA GTCTAAGTCCACTTTGAATATATTTGTGTTGTAGATCAATGGCTCACGCG AGAGTCACCCTGAATTTTAATACGTTCCTAGAGAAAGCTAAGTTGAAAGA TGATGGAAGCAACTTTGTAGACTGGGCTCATAATCTAATTAAGTTGCTCC TGCAAGCTGGGAAGAAGGATTATGTCCTTAATGCTGCGCTAGGAGATGAA CCACCCGCTACGGCTGACCAAGATGTTAAGAACGCTTGGTTAACACGTAA GGAGGACTACTCAGTAGTTCAACGTGCAGTCTTGTATGGCTTAGAGCCGG GACTTCAACGTCGCTTTGAGCGTCATGGAGCATATGAGATGTTCCAGGAG TTGAAGTTTATCTTTCAGAAGAACACCCGGATCGAGAGGTATGAGACCTT TGATAAATTCTATGCTTGCAAGATGGAGGAGAATTCGTCTGTCAGTGAAC ATGTGCTCAAAATGGCTGGGTACTCAAGCCGTCTAGCTGAGCTGGGGATT GAACTCCCGCAAGAGGCTATCACTGACAGAATTCTTCAATCACTGCCGCC AAGCTATAAGGGCTTTTTGTTGAACTACAACATGCAAGGGATGAACAAGT CACCCGGCGAGTTGTTTGCGATGCTGAAAGTCGTAGAGTGAGAACTCCGT AAAGAGCATCAAGTGTTGATGGTGAATAAGACCACTAGTTTCAAGAGAAA CGACAAAGGAAAGAAGGGTAGTTCGAAGAAGAGCGGCAAGCCTGTTGCCA ATCCGACGAAGAAACCCAAAGCTGGTCCTAAGCCTGAAACGGAGTGCTAT TATTGCAAGGGTATGGGTCACTGGAAGCGCAACTGCCCCAAGTATCTGGC TGATAAGAAGGCGGCCAAAGAAAAATCAGGTATATTTGATATACATGTTA TTGATGTGTACTTAACCAGTTCTCGTAGTAGTGCCTGGGTATTCGATACC GGTTCTGTTGCTCATATTTGCAACTCAAAACAGGAACTGCGGAATAAGCG AAGGCTGGCGAAGGATGAAGTGACGATGCGCGTGGGAAATGGTTCCAAGG TTGATGCAATCGCCGTCGGCACAATTTCACTTCAGTTACCATCAGGATTA GTTATGAACTTAAATAATTGTTATTTAGTGTCTGCGTTAAGCATGAACAT TATATGGATACTGTTTATTGCGAGACGGTTACTCGTTTAAGTCAGAGAAT AATGGTTGCTCTGTTTCTATGAGTAATATCTTTTATGGTCATGCACCCAT TGTGAGAGGATTTTTCATATTGAATCTTGATAGTGATAATACACATATAC ATAACATTGAGACCAAAAGAGTTAGAGTTAACAATGATAGCGCCATGTTT TTATGGCACTGCCGCTTAGGTCATATTGGTGTAAAGCGCATGAAGAAACT CCATACCGATGGACTTTTGGAGTCACTTGACACGTGCGAACCATGCCTCA TGGGCAAGATGACTAAAACTCCGTTCTCCGGAACAATGGAGCGTGCAAGT GACTTGTTGGAAATCATACATACCGATGTGTGTGATCCGATGAGTGTGGA GGCACGCAGCGGATATCATTATTTTCTCACCTTCACTGACGATTTGAGTA GATATGGTTATGTCTACTTGATGAAGCACAAGTCTGAAACATTTGAAAAG TTCAAGCAATTTCAGAGTGAAGTTGAAAATCATTATAACAAGAAGATCAA GTTCCTACGGTCTGATCGTGGGGGTGAATATCTGAGTTTCGAGTTTGGTG CTCACTTAAGACAATGTGGAATTGTTTCACAGTTGACACCGCCTGGAACA CCACAGTGTAATGGTGTGTCCGAACGTCGTAATCGTACTTTATTAGAGAT GGTGCGATCTATGATGTATATTACCGATTTGCCGTTATCGTTTTGGGGTT ATTTATTAAAAACAGCTGCATTCACTTTAAATAGGGCACCATCAAAATCT GTTGAGATGACACCATACGAACTGTGGTATGGCAATAGACCAAAGTTGTC GTTTCTTAAAGTTTGGGGATATGATGCTTATGTCAAAAAGCTTCAGCCTG AATATCTGGAACCCAAAGCGGAAAAGTGCGTCTTCATAGGTTACCCGAAA GAGACAGTTGGGTATACCTTCCATCTCAAATCCGAGGGCAAAGTGTTTGT TGCTAAGAACGAAGCTTTTCTCGAGAAGGAGTTTCTCTCGAGAGAATTGA GTGGGAGGAAGATAGAACTTGATGCGGTTGTCGAACCTCTCATCCCTCTG GATGGTGGCGCAAGGCAAGGAGAAACCCCTGTCGTTGTGATGCCGGGATA GGAGGAAGTTAATGATGATGATCATGAAACTCCGGATCAAGTTCCTGTCG AATCTCGCAGGTCGACGAGACCGCGTACTACTCGAGAGTGGTACGGTAAT CCCGTCTTATCAATTATGTTGTTGGACAACAATGAACCTACGAATTATGA AGAAGCAATGATGGGCCCAGATTCCAACAAATGGCTGGAGGCCATGAAGT CCGAGATAGGATCTATGTATGAAAACAAAGTGTGGACTTTGGAAGTACTA CCTGAAGGCTGCAAGGCTATTCAGAACAAATGGATCTTTAAGAAGAAGAC GGGCGCTGACAGTAATGTGACCGTTTATAAAGCTTGACTTGTGGCAAAGG GTTTTTCACAAGTTCAAGGGATTGACTACGATGAGACATTCTCACCCGTA GCGATGCTTAAGTCCGTCCGAATCATGTTAGCAATAGCTGCATTTTTCGA TTATGAAATCTGGCAGATGGATGTCAAAGCGGCGTTCCTTAACGGTCTCC TTAAGGAAGAGTTGTATATGATGCAACCCGAAGGTTTTGTCGATCCTAAA AATGCTAACAAAGCGTGCAAGCTCCAGGGATCCATTTATGGACTGGTGCA AGCATCTCGAAGTTGGAATAAACGCTTTGGTGAGGTGATCAAAGCATTTG GGTTTATACAAGTGGTTGGAGAATCTTGTATTTACAAGAAGGTGAGTGGG AGCTCTGTGGCGTTCCTAATACTATATGTGGATGACATATTACTGATTGG AAACGGCGTGGAGTTTTTGGAGAACATAAAGGATTACTTGAATAAAAGTT TCTCTATGAAGGACCTAGGAGAAGCTGCTTACATTCTAGGCATTAAGATC TATAGGGATAGATCATAACGCGTGATAGGACTTTCACAAAGCACGTACCT TGATAAAGTTTTGAAGAGGTTCAAAATGGAACAGTCCAAGAAGGGGCTCT TGCCAGTTTTACAAGGTACGAGATTGAGTAAGACTCAGTGCCCAGCAACT GATAAAGATATAGAGCATATGAGCACCGTCCCCTATGCTTCAGCCATAGG TTCTATCATGTATGCAATGTTGTGCATTAGACCGGACGTTAGCCTGGCCA TAAGTATGGCAGGCAGGTTCCAGAGTAATCCAGGAGTGGATCACTGGATG GCGGTCAAGAATATCCTGAAGTACCTGAAAAGGACTACGGAGATGTTTCT CGTATATGGAGGTGACAAAGAGCTCGCCGTAAAGGGTTACGTCGATGCAA GCTTTGACACAGATCCGGACGACTCTAAGTCGCAGACCGGATATGTATTT ATTCTTAATGGGGGTGTGGTAAGCTGGTGCAGTTCCAAGCAAAGCGTCGT AGCTGATTCTACATGTGAAGCGGAGTACTTGGCTGCCTCGGAGGCAACTA AGGAAGGTGTGTGGATGAAGCAGTTAATGACGGATCTTGGAGTGGTGTCG AGCGCACTGAATCCAATAACCCTGTTTTGTGACAACATGGGTGTCATTGC CTTAGCAAAGGAACCGCAGTTTCACAAGAATACCATACGCATCAAACGAC GCTTCAACCTCATCCGCGACTACGTCGAGGAGGAGGACGTGAATATATGC AAAGTGCACATGGATCTGAATGTAGCACCCGCTGACTAAACCTCTTCCAC GGGCAAAGCATGATCAACACCAGAAGTGTATGGGTGTTAGATTTATTATA ATGTAATTCGCATGGTGATGTGAGGGCTAGATTATTGACTCTAGTGCAAG TGGGAGACTGTCGGAATTATGCCCTAGAGGCAATGATAAATAAGTTATTA TTATAATTCCTGTATCAAGATAATCGTTTATTATCCATGCTATAATTGTG TTGAATGAAGACTTAGATACATGTGTGGATACATAGACAAAACACTGTCC CTAGCCTAGCAAGCCTCTAGTTGGCTAGCGAGTTGGTCAAGGATAGTCAG GGTCTTCTGGCTATGTACAAGGTGTTGTTGCTTGATGACTGGATCACATC ATCGGGAGAATCATGTGATGGACTAGACCCAAACTAATAGACGTAGCATG TTGATCGTGTCATTTTGTAGCTACTGTTTTCTGCATGTCAAGTATTTATT CCTATGACCATGAGATCATATAACTCACTGACACCGGAGGAATGCTTTGT GTGTATCAAACGTCACAACGTAACTGGGTGGCTATAAAGATGCTCTACAG GTATCTCCGAAGGTGTCCGTTGAGTTAGTATGGATCAAGACTGGGATTTT TCACTCCGTGTGACGGAGAGGTATCTCGGGGCCCACTCGGTAATACAACA TCACACACAAGCCTTGCAAGCAATGTGACTTAGGGTAAGCCACGGGATCT TGTATTACGGGACAAGTAAAGAGACTTGCCGGTAAACGAGATTGAAATAG GTATGCGGATACTGACGATCGAATCTCGGGGCAAGTAACATACCGAAGGA CAAAGGGAATGACATACGGGATTATATGAATCCTTGGCACTAAGGTTCAA GCGATAAGATCTTCGTAGAATATGTAGGATCAAATATGGGTATCTAGGTC CCGCTATTGGATATTGATCGAGGAGTCCCTCGGGTCATGTCTACATAGTT CTCGAACCCGCAGGGTCTACACACTTAAGGTTCGGCATTGTTGTATGCGT ATTTGAGTTATATGGTTGGTTACCGAATGTTGTTCGGAGTCCCGGATGAG ATCACAGACGTCATGAGGGTTTCCGGAATGGTCCGGAAACGAAGATTGAT ATATAGGATGACCTCATTTGATTACCGGAAAGTTTTCGGCATTACCGGGA ATGTACCGGGAGTGACGAATGGGTTCCGGATGTTCAACGGGGGGGGGGGG GGGGACAGCCCACCCCGGGGAAGCCCATAGGCCTTAGGGGTGCCACACCA GCCCTTAGTGGGCTTGTGGGCAAGCCCAAGAAGGCCCCTGCGCAGGATAA GAGAAAATCAAAGAGAAAAGGAAAAAAAGGGGAAGTGGGGAAAGAGAGAA GGACTCCACCTTCCAATCCTAGTTGGACTAGGATTGGAGGAGGACTCCTC CGCCTCCCCCCTTCGGGCGAACCCCTTGGGGCTCCTTGAGCCTCAAGGCA AGGCCCCTCCCCTCCCTCCTATATATACTGAGGTATTAGGGATGATTTGA GACAACTTTTCCACGGCCGCCCGACCACATGCCTCCACGGTTTTTCCTCT AGATCGCGTTCCTACGGAGCTCGGGCAGAGCCTGCTGAGATTAGCTCACC ACCAACCTCCGGAGCGCCGTCACGCTGCCGGAGAACTCATCTACCTCTCC GTCTCTCTTGCTGGATTAAGAAGGCCGAGATCATCGTCGTGCTGTACGTG TGCTGAACGCGGAGGTGTCGTCCGTTCGGCACTAGATCGGAGCGGATCTT GGGACGGATCGCGGAACGGTTCGTGGGACGGTTCGTGGGGCGGATCAAGG GACGTGAGGACGTTCCACTACATCAACCGCGTTTATTAACGCTTCTGCTG TGCGATCTACAAGGGTACGTATATCTGAAATCCCCCTCATAGATGGACAT CACCATGACAGGTCTTCGTGCGCGCGTAGGAAATTTTTTGTTTCCCATAC GACGTTTCCCAACACGAAC