NAME_ID = DTC_Caspar_AF521177-1
CLASSIF = DNA transposon, TIR, CACTA
COMMENT = complete element, (3 bp TSD)
TREPACC = TREP787
ORGANIS = Hordeum vulgare
SIZEDNA = 9105
SSOURCE = AF521177
RELDATE = 01-OCT-2002
SUBMITT = Thomas Wicker
REFEREN = Brunner et al.,Genetics. 2003 164:673-683.
ANN_TSD = 1-3, 9103-9105
ANN_LTR = 
PROTEIN = PTREP21, PTREP33
>gnl|TREP|TREP787 DNA transposon, TIR, CACTA, "DTC_Caspar_AF521177-1"; complete element, (3 bp TSD)
GACCACTGGTAGAAAAAGAGGCTTCCGTCCAGCCCCATAAGTCGCGACAC
TGTAGGAACCGCGACTAATGATTTCTTTTNAGTCCGGTTCGGCAGACGAA
CCGCGACCAAAGGCCTGGGCCAGGGCGCTCGGTGGCCAGCTGGTGCACGT
GAGKGGGGTCTCTCTGGTGTGCATCGCAAGCCGCGACTAAAGGTGCCCAA
AGGCCTTTAGTCGCGGTTTGCCATGCCAnCCGCGACTAAATCTCCTCCCC
TATAGATACCAGTTCAGCACACTCACTTAGCCATTTGGTGCCACTTCTCT
TCACAAGCTTCACAAGGGGGTGTAGGTTTGCTTTTGGTTCCTCTTATGCA
CACAAGGTGTTTGATGAAATGCCCCAAGAGCGTGAAACAAACATGATATG
AAGTGTTGGAGCCACACTTGAGGTTCCTCATTTATTTTTTCCTCCTTGAT
CGCGGTTAGCAACTTGAACCTTTCATGCATGTGTGTCATTGATAAAATAT
GCATGTGTGTTGTTCATTGTTTAATTTCTATTGTTTATAGCTAGTTAGTT
TAACAAATGCATGATGGTTAATTATATATTTTATATTATAATAATGCAGA
TGAATCGGCAATGGATGTACGGTAACCGACTCTCCCGCGAGTTCACTACG
GGTTTGAAAGATTTCCTCGTAGTGGCTAATGCGAACAAGCAGAAGGGTTT
TGTTATCTGTCCATGTGTTGACTGTnAGAATCAGAAGGGTTACTCTTCCT
CAAGAGAAGTTCACCTGCACCTGCTTCGGCACGGTTTCATGCCAAGCTAT
AATTGTTGGACCAAGCATGGAGAAAGAGGGGTTATAATGGAAGAAGATGA
AGAAGGGGATGATTTCATGGATGAAAGCTATCTTGCTCATTTCGGTGATA
CTTTCATGGAGGATGCTGAAGGTGAAGGGGAAGGTGAAGGTGAAGAAGAG
GCACGTGATGAGACCGTTGATGATCTTGGTCGGACCATTGCTGATGCACG
GAGACGCTGCGAAACTGAAAAGGAGAGGGAGAATTTGGATCGCATGTTAG
AGGATCACAGAAAGTCGTTGTACCCCGGATGCGATGATGGTCTGAAAAAG
CTGGGCTGCACACTGGATTTGCTGAAATGGAAGGCACAGGCAGGTGTAGC
TGACTCGGCATTTGAAAACTTGCTGAAAATGTTGAAGAATATGTTTCCAA
AGAATAACGAGTTGCCCGCCAGTACGTACGAAGCAAAGAAGGTTGTCTGC
CCTCTAGGTTTAGAGGTTCTGAAGATACATGCATGCATCAACGACTGCAT
CCTCTACCGCGGTGAATACGAGAATTTGAATGAATGCCCGGTATGCACTG
CATTGCGTTATAAGATCAGAGGCGATGACCCTGGTGACGATGTTGAGGGC
GAGAAACCCAGGAAGAGGGTTTCCGCCAAGGTGATGTGGTATGCTCCTAT
AATACCACGGTTGAAACGTCTGTTCAGGAACAAAGAGCATGCCAAGTTGT
TGCGATGGCACAAAGAGGACCGTAAGTCGGACGGGGAGTTGAGACACACC
GCAGATGGAACGCAATGGAGAAAGATCGACAGAGAGTTCAAAGATTTTKG
CASTGACGCAAGGAACATAAGATTTGGTCTAAGTACAGATGGCATGAATC
CTTTTGGCGAGCAGAGCTCCAGCCATAGCACCTGGCCCGTGACTCTATGC
ATCTACAACHWTWMMWCMTTGGTTGTGCATGAAGCGGAAGTTCATTATGA
TGCCAGTGCTCATCCAAGGTCCGAAGCAACCCGGCAACGACATCGATGTG
TACCTAAGGCCATTAGTTGATGAACTTTTACAGCTGTGGGGCAGACCTGG
TGTCCGTGTGTGGGATGAGCACAAAGAAGAGGAATTTGACCTACGAGCGT
TGCTTTTCGTAACCATCAACGATTGGCCTGCTCTTAGTAACCTTTCGGGA
CTGTCAAATAAGGGATACAATGCATGCACGCACTGCTTACATGAGACTGA
TAGTGTACATTTGCCAAATTGTAAGAAGAACGTGTACCTTGGGCATCGTC
GATTTCTTCCGAAAATTCATCCAGTAAGAAAGAAAGGCAAGCATTACAAC
GGCAAGGCAGATCACCGGCCGAAGCCTGCGGAACGCACTGGTGCTGAGGT
ATTTGATATGGTCAAGGATTTGAAAGTCATCTTTGGAAAGGGTCCTGGCG
GACAATCAGTTCCGAAGGGAGCTGACGGGCACGCAGCCATGTGGAAGAAG
AAATCTATATTCTGGGAGCTAGAATATTGGAAAGTCCTAGAAGTCCGCTC
TGCAATCGACGTGATGCACGTTACGAAGAATATTTGCGTGAACCTCCTAA
GCTTCTTGGGCGTGTATGGGAAGACAAATGATACAAAGGAAGCACGGCAG
GACCAGCAACGTTTGAAAGACCCTGATGACCGGCATCCGGAATGGTTTCA
AGGTCGTGCCAGCTACGCTCTGACCAAAGAAGAGAAGGTCATCTTTTTTG
AATGCCTGAGCAGTATGAAGGTCCCGTCTGGATTCTCGTCCAATATAAAG
GGAATAATAAACATGGCGGAGAAAAAGTTCCAAAACCTGAAGTCTCACGA
CTGCCACGTGATTATGACGCAATTGCTTTCGATTGCTTTGAGGGGGCTCC
TGCCGCAAAATGTTCGAGTAGCCATTGTGAAGCTATGTGCATTCCTCAAT
GCAATCTCTCAGAAGGTAATCAATCCAGAAGTTCTACCACGGTTACAGAA
CGATGTGATCCAATGTCTTGTCAGTTTCGAGTTGGTGTTCCCGCCATCCT
TCTTCAATATTATGACGCACCTCCTGGTTCACCTAGTCGAAGAGATTTTC
GTTCTCGGTCCTGTATTTCTACACAATATGTTCCCCTTCGAGAGGTTCAT
GGGAGTATTAAAGAAATATGTTCGTAACCGTGCTAGGCCAGAAGGAAGCA
TCGCCAAGGGCTATGGAAATGAGGAGGTAATTGAGTTTTGTGTTGACTTT
GTTCCTGACCTTAAGCCGATTAGTCTTCCTCGATCGCGGCACGAGGGGAG
ACTAAGTGGAAAAGGCACGATCGGAAGAAAATCAACGATATGTATGGACG
GCCATTCTCTGACTGAAGCACACCACACTATACTGACCAATTCCAGCTTG
GTGGCTCCGTACTTTGAGAAACACAAGAATATTTTACGCTCGGACAACCC
GGGGAAGCTTGAATCCTGGATTAGGAAGGTCCACATGGAGACTTTCGGCA
GTTGGTTGAGAAAACATTTAATGAATGACAATGATGTTGTAGATCAGCTG
TACATGTTGGCCAAGACACCATCTTCGACTATAACGACTTTCCAAGGGTA
CGAGATAAATGGGAATACATTTTACACGATCGCCCAAGATAAAAAGAGCA
CCAACCAAAACAGTGGTGTCCGCTTTGATGCAGCAACCGAGAATGGGCAA
GAGGTCACATATTATGGTTACATAGAGGAGATATGGGAACTTGACTATGG
ACCCTCCTTTAAGGTCCCTTTGTTCCGGTGCAAATGGTTCAAGCTAACAG
GAGGTGGGGTAAAGGTGGACCAGCAATACGGAATGACAATGGTGGATTTC
AACAATCTTGGTTACCTTGACGAACCATTCGTCCTAGCGAAAGATGTCGC
TCAGGTTTTCTATGTGAAGGACATGAGTAGCAAACCGAGGAAACGGAAAG
ATAAGAAAACGATCAGTACATCATGCGATGATCCAAAGCGCCACATTGTT
CTTTCAGGGAAAAGAAACATCGTGGGAGTGGAGGACAAGACAGACATGTC
AGAAGATTATAATATGTTTGCTGAAATTCCGCCCTTCAAAGTGAACACCG
ACCCAAGCATTAAGTTAAATGATGAGGATGCTCCATGGATACGGCACAAT
CGTAAGCAAGCAGGGACACAAGGGAAGAAATGATGTGTAATAATTTATTG
TACCAAACTTTGTTGAATGGATCATGTGAATTATATTACCCGTGATGTGT
TTGGTGTCCATTTTCGAATGATTCGAGATACCACTGATGATACATGAAAT
TTGGAGTGATTTAGTCATACTCCTGCCTAGGCGTATAATATGCATACTCG
TAGTCTTCATAGCCGCCGTCGTCGTTGTACTGGTAGTCGTCGCCTTCTAA
GTTGCCGCCGTCGTCGTCGCTGCTGTCGTCGCTGTCGTCGGGCGGCGCTC
GTGGCTCGAACTGAGGGTAGCGCAGGCGGGGGATATCGCCGGCCGTGATG
TAGTCCATGACGCTCTGCAGAGTCCGGCCGTACCACCATAGCCGACGGCC
GGCCTCGTGGAAGTTCCCAGGAGGCAGACCGTCCTCCACATACCTGGCGA
GCGCCCTCTCACGCCGATTGATGAAGAAGGCGTCCCAAGTATGCTGGTTA
TCGGGATGCCAGCGGGGATTCATCCGCTGCTCCGGCGTGAGGTCGAGGTA
GTAGTGGTTCGTGATGGCCGCCCGGCGCGCAGTACCCTGAGGGACGGGAG
GGACCGGCACGCCGCCGGCGCTTAGGCTCCAGCCGGTGGGGACGCGGTAC
CCCGGTGGACAAGGGTAGTTCGAGGCGCAAAGCTCCTCCACCTGCTGGTA
GGTTAGAGTGGGTGCGGTGGAAGCCATGAGAGAGTGATGAGAGATTGTAG
AGATGTGATAATGCTGGCCAAGCCGGGCTACATATATGTAGTGAGAAATG
GCGGGAAAAATGGGAGCGGGAAGACAGGAGGCGGGAAGAAAGAGGCGGGA
AGACAGGGAAGAAATGGCGGGAAGAAGAGGAATCCAGAGCTGGTCATCTA
ACCTTTAGTCCCGGCTGGTTGGTGCATTTTGAATTGAATTAGTTTTATTT
TTCTTAATTTTTTGATATATTATTTGTATTTTTAACATTTTGAATTGAAT
TAGTTnTATTTTTCTTAATTTTTTGATATAATTTTTGTGTTTTTAACATA
TTGAATTGAATTAGTTTTAGGGTTTCTGAATTTTTTGATATATTATTTGT
ATTTTTAAGATATTGAAAAAGAAAAGTATTTTGAAAAATACCTTTAGTCG
CGGTTGGCCAGACCAACCGCGACTAAAGGTCGTTGCGCGCGGGAACGAAA
AAACCCTTTAGTCGCGGTTGGTTTTGCCAACCGCGCCTAAAGTTTACCTT
TAGTCGCGGGTCGCCTCCCCAACCGCGACTAAAGGGGGCGGGCTATAAAT
ACAAGGGCCTGCCGCCGTCTTCTCCGATTCTCGTCTTCTCCGATTTTCTG
CCGCGCGCGCGGAAGGCCTGCCGCCGTCGCCATCGCCATCGACGCCGCCC
GCCGTCGCCCTCGCCCACCGCGCGCGCGCCGCCTCGCTCGCCCGCCCTCA
ACGACGCCGGCCGGCCTCGGTACTGCCGCCTCGCTCGCCCGCCCTCGCCG
CCTCGCTCGCCCGCTTAACGCCGCAAATTTCTACAGAGTTTACAGAGTAT
AAACTTTGTATATACAATTCCAAACATATACAATACAAAAATATAACTGA
TGGTGTATCCAATGACATGCATTTCGTAAGTTAATGGACATAATTTGTGT
GTAAACAAGGTCAAAGTTTGTGATTTTTGACTTTTGAAAAAAATCTATAC
ATACTACATTATGGAATGGATGGAGTATAAATTTTCTTGACATGGATTGT
TTAAGTTGTAGGAATAAATCCCATATGGTATAGTTTTTTCATTGATGTTT
ATTTTTTTATCGGGACAATAACTCCAATAACATAAACTTCCTTAAAGACT
TTCACACAATCCATGTTTGTTTTAATGAATGTCCTCAACAACCATACACT
GCACTACCACCAATTTATATGCCGTGTTCTCTGCATGCTTCAGACTCACT
GAGTTTTGACACATCTGAGAAACCACCTGTTAGCAAAAGAGGGAAAGCAC
TATGCAAGAACAAAGAAAAAGAAATAAAGAAAGGGAGGTCATCACTTCAT
CTTGAGAATAGAAGACGTCGGGAAGAAAACGCTCAGTTGATGCGACCGCT
AGCATCCCACGAAGAGAAAACATATTGTCGAGCCCTATGATTTCTCGATG
CACCTGCACAGTCCCGGGTCTCATACTCGTGTGGTTAGTACACACGGCAG
TGATGAGAAAAAAAGTATGGTCTAAAACGTATAATCATTTGAATTTACAT
AAAAAATGACTTAGTTTAACAAAAACGGTAAAATAACTTAGGGTAAGAAT
TAGTTTAACAAAAACGGTAAAATAACTCCCTCTCCGTGACGCCGTCGTCT
GCCGCCCCGTCTCGCGCTCTACCGCGACACCCTCTCCCACCCCTTCCTCG
CCCCCTCCTTTTGCCACCGCCCTTTCGCCACCGCCACCGCCACCGTCCCC
CTTCTTCACTTAATTAATTTGTTTTTACTACATGTTTTCAGGACTGACAT
AATGGCGGACGATAGAGCTGACCCGATTATGGACAACTATGATCCGGACG
GTGAAGCACATATGTTCGGCATCATAAACGGCGATATTCTATATGTGCCG
ACCGGAGAAGAAGAAGATGATATCTCTTCTTATCTGAACCTTGACGGTGA
AAATGAAGGGCGCCGTCGGCAAGATGATGCCAAACAAACGCCGATAAACG
ACGATCTTCAAATGGAAGTAGCAACCACCTCCGGCGCCGAGGTATATATA
CATTGAGCCTCTGGTGATACAAACTAACTGATTTGAATAAATATGTGTGT
ACTAACGCGCGCTACTCTCTTTCTTATTTTAGCCCTCGGCCGGATCGTCG
AAACAATCGAGTACGTCGTCAAAGCGTGGCGCAACCAAGACGATGAAACA
AGGAGAAACATGCACCATCGAGGTTGTCGATAGTGCAACCGGCAGGCCGC
TGGAGCCCCGCAAGAACGCCACCAAGTTTGTCAGCCAATGCGGAGCCGTT
GTTAGAGACAACGTCTCGATCACCGTCCAGGAGTGGAATGAGCCAAAGAA
GGCACGAATTGCTGGTTTCACTTTTGTCGATAAGAGAACAAAAAAAGATT
GCTTCATGAGAAATGGAAGGCGGACTGCAAGAAGAAAAGAGAGCCCGAGC
CCAAGCCAGTATTTTCTGATGAGCAAAAAAAGTGGGCTAAGTCATTTTTG
GAGCACACCGTCCCAAGCCGCGAAGAATCTGCCTGACGACTATGCACGTG
AACTTCGTAGCAAGGCATTCATGTTGAAGGAGAAGAAAAGAGCGGGCGGG
AGAACCAGAAGAACAAAGCCCTGGAGGAAGGCCGAGAAACGGAATTAGAA
AGTAGAAAAAGCGGGAAACGAGTTGCCCAGCTCGGGGAACAAAGTAAACA
ATCGATTGCCCCGCTTATAGTGAAAGCCGCCGGTCCGGATGACCCCGATA
TCATAGCAGCTGCGGCAGCACATGGATTGACTGTAACGAGTGCCAGAGAA
CAAACGGCCAACTTAGGTATTACTCTTCGTGAAATGTTAGGCCTTGATGA
GGCGCCAGTGAAGGAGGTAGTAATTACATATGTGAAGAATGGGCCTCGCA
TCGAGCCTGCGCAGGAAGAGGATCTACCTCCACAAATGAAAGGTCTGCTG
AAATGGTACAAGGGTTACATAAAAAATAAAAACGCCAAAGATTATATTTA
TGCGGAAGTTAGATATGAGCATCACTTCAAACATTACTATGTACAAATTC
ATCTGAGTGAATTGTTCCAGCTTTTCAATCTGCGGCGAGCTCGACAAATC
TATCATCAGTTGCTACGTTCTGTAAGTGATTTATTTATACCCCATCTCGT
TCATATTGCCTGCACTATATATATGTCGTAACTATATTGTTGTGTCTGCT
ATTATACATGCAGAATGAAGATTAAGGAATGCAGAGTAAGGAACATCCAT
GATGTTGGGTTCATTGACCCACACATCGTTAATGGATATGTGTTGGAGCA
TCACCCCGCCGACATGGAGGCAGACCTGTGGCAGTTTCTTACAAAGCAGG
AACTCAAAAGTGATATTCTATTTCCTTACCATTTTGGGTGAGTGTTTCTG
TCTTGAGCACATTCTCTTTTGTTTACTCCATGCATGGTATGTGGCCGGCT
AATCGATGAGTTATGCATGACGTACTGTGCATGTATCGTGTCCGCAGGTT
CCATTGGATTCTGCTAGTAATTAAAGTTGACACCTCAGAATGTCTCGTCC
ACGACTCTCTGAATATGGATCCAAAGCTTTGGGGCGGCATGAGAAGAATG
CTGCAGAAGTAATTATTTTCATTCATTTGCGCTCTATATCGATCGGCCTA
TTTCGTTCATTTCCTAATATCAAGTAACTAATAACTCTCTTGTTCATTTA
ATTTTCTTTGCCTCGTAGGGTTTGGAGACGGTTCGTAGATACAAAGGTCG
GTGAATTCAAAAAAGAGCTAGAATTCAAAAGGTCAAAGGCTAAAAATGGT
GGGGATATTCAGCCAGCGGGGACCAATCTATGTGGATACTATGTCTGTGA
GATGATCCGGAGATACACCTCTGAGCGGGTTCCGAGTGATACCAATGCTC
AGCGGAATAACCTCCGGGTGATGCTTAGTCCAGAAGCTCGCTTCCAACCA
CTTCAAGAGGAACTAGCTGGATGGTTCAGGAGGGAAGTCCTCCATCGTAA
AGGAGAACACCATTACGAGGACGTAGAACTTTATATGCATTAAATTATGT
ATGGAAACTTGTTCAAAATTGTATATGGTCATCCGATGATATTGAATATA
TATTGTATATTCCTCTTGAATTCTTTTTGGTTCTAATTTCAAATTTGTTT
GAAATTGTACATTCATATGCATGTATGTAGTACCGTAGAATATGGGAAAC
CCTCCAAAATTAAAATAAAGCCCAAAAGAAATAAAACAATTCAAATTAAA
CAGAAAACAGGTTTAGGGGGGGGGGGGCTAAACCCTGTGGCGGCCTTTAG
TCGCGGTTGGCCAAAAAAACCGCGACTAAAGGTCCTCCGCCCCGACGGCC
GCCTGGCGCCCACGTGGACGGGCCTTTAGTTGGGGTTCTTAAGCAACCGC
GACTAAAGGGGGGGCCTTTAGTCGCGCCTATTTGGTCGCGGTTACGCAAC
CGCGACTAATGGCAGTTGCGAACCGCGACCAAAGGCCCTTTTTCCATCAG
TGGAC