>gnl|PTREP|PTREP100 Retrotransposon, LINE, unknown, "RIX_Ramona_109N23-1"; (TREP1608) polyprotein
PPRPMSAFCWNCRGAGKAATVRELHDFAKKFVPTLLCIVETQIARSRVEA
LAGTLGYDNSYALSQGRSGGIGLFWNNSIKVEILGYSCYHLDVSVEEGNN
DIWRLTCIYGEAQTHLRHHTWTVLKNISTLSTLPWLCMRDFNEVLRPEEH
EGVGQRSNAQIQAFRDSTDICMLLDLGFKGNFWTFEKKVTGGSYTRCRLD
RALVNTAWKATFPLASVTHLCSSVEEMRHKLDGLAKGLNTWSRDTFGSVR
KEIKHLKSLLEELRSDPARTGPSHVELKINEKLIEMYHREEIMWRQRARV
QWLSAGDRNTKFFHLQASIRRKKNMIKALQNSLGAVIADPAELKAMANDF
YQNLYTSEWVQDMGTVLQHVP*KVTDEVNTTLCAPYTKDEVKNALFQMFP
TKAPGPYQRHWDICGNEVTDIVLRIVRGEESPECINDTVLVLIPKVTSPT
VLSQFRPISLCNVLSEVIANRLKII*PAIIFEEQSAFVPRRLITDNIICA
YECLHFMKRSRSKANSFCALKLDVIKAYDRLEWSYLRAIMEKLGFAGQWI
NTVMSMVSSVSFSVLFNGEELESFRPTRGIRQGDPISPYLFLIAAEGLSC
LLKSSSSSSPVGIKVAPTAPAVNHLLFADDSLLLFKASVEGSRVISNLLD
TYCGASGQRINHDKSSIYFSKGYPETLREAVKNTLHVHNESLSERYLGMP
TDVGHSKNGTFKYLRDRVWEKIKGWMEKLLSAAGKEVLIKSIAQAISVFS
MSCFRLPRGLCESITSIIRQFWWGSKQGRRKSSWVAWDIMTQPKHLGGLG
FRDMEIFNLALLAH*AWRLLTEERSLSGKILKAVYYLSSILLEAELGTHP
SQIWRAILDGRDILTQGVIRRIGNGETTNIWHQNWIPRDSFKRPITSLVE
NPPQMVSQLIDATSSSWNEELVRATFTHFDATDILKIPICMRRVNDFWAW
HEESRGLFSVRSPYRMALCIKHSRESWLNEQGGAPTLQNEGDHWSRLWHI
EVPSKLKTFLWRLARRSMPTG*LLKHRNMSTEHN*HLCGATDTWKHALLW
CPMAAGVWALAPEALVMHLVDRQEDGSREWLFALHDTSDSEAFVRLTVTL
WAIWGSKEESDIRRYLSIQSPHNIDGFIMSYLSELRAIKSTCQQPTVPSI
PRPNRWQTREEGSVKINVDAAVSNHARHGAVGAVCRSSEGIFLGASVMVI
KHIIDPTTLEAMAIRDALALADDLYQRRVHVASDCK

>gnl|PTREP|PTREP101 Retrotransposon, LTR, Copia, "RLC_Ale_109N23-1"; (TREP1610) polyprotein
MAGTDASTAVASTVSTLSTSTASTLTTQFAGSSYASSSTSSNGASSLGSP
PSEKLTRTNFLLWKAIVLPQIKGAQMEHFLDATTTAPPATITINKDGKEE
QVLNYTRTIWYAQQQQLQGYLMGSLSREVLAQVVTLQTPAEVWNAIHAFF
AAQTQSQIVNTRIALANLQKGNMGMPEYLAKIKALTDEIACTGSPLGEGE
IVSFVLKGLDMEYNAVVSALSDRVEPVTVTELYNQLLSFEARINLLQQGN
LRQSSANALTRGRGYGGRGRGHQGQQGRGRGGNNSGYGRGRSNNNNNGAR
SNNSNNGGRSGGRPRTRCQLCKKPGHEVLECWHRYDEDFVPEERHVLAAL
REQGGEGETVWYADSGATDHITSELEKLATRERYYGNDQVNTAATGGGMD
IHHIGRAFINSPTSKRDLILEDVLHVPQANKNLASMSRLSADNNVFFETH
PKYFFIKNRATRELLHHGRCIGGLYPITSKSVSRKHHRQVYSAVKPSLAR
WHQRLGHPSSIIVEQVVNKDNLPLSGRENSESVCEACQCAKSHQLPYPKS
SSVSHAPLELIFSDVWGHARDSFGRKKYYVSFIDDFSKFTWIYLLKHKSE
VFAVFQEFQKLVERHFDRKILAVQSDWGGEYEKLNSFFRSIGIEHHVSCR
HAHQQNGSAERKHRHIVEVGLSLLAHASMPLKYWDEAFIAATYLINRLPS
RVIGNSTPLECMYHQKPDYNSLKIFGCACYPNLRSYNRSKLDFRSTQCVF
IGYSNLHKGYKCLEVSTGRVYISRDVVFDETLFPFAQLHPNAGALLRQEI
SLLSDPLTSPDHGGELIETDHDISPTRKELDENDASNGSNAVFRHDFMCA
EQDKTSAGSHDDLVQRSSF*SARSEEDPADPSAPAASGPASLGAGLNAGG
RRESPAATRGLARPMGDKPTKAGPAHEAACRTPERAALADATRSSPAGSP
GTRMTPDTRLIPSADLDFSDLEPESSPCDVPGSSVAHPAASGSATSEACG
SENNNSAATIVVPQVSQRTTRSKSGIFKPKEYKDGTIRYDKRKHAFLTSV
GEPESLSDALAHKEWKEAMDREYLALMKNKTWHLVPPGKGKNVIDCKWVY
KIKRKADGSIDRYKARLVAKGFKQRFGIDYEDTFSPVIKSATIRLVLSIA
ISRGWSLRQLDVQNAFLHGVLEEEVFMRQPPGYENKNTPYHVCKLDKALY
GLKQAPRAWYSRLSTQLQRLGFTPSKADTSLFFYNKGSITIFVLVYVDDI
IVASSHPDATTSLLHDLNMEFALKDLGNLHYFLGIEVKQVKDGILLTQEK
YTADIIKRIGLEYCKPVSTPLSTSEKLSVEGGELLGPEDATNYRSIVGAL
QYLTLTRPDISYSVNKVCQYLHAPSTVHWTTVKRIVRYLKYTMGLGVKIT
KSPSMLVSAYSDADWAGCIDDRRSTGGFAVFLGSNLISWSARK*ATVSRS
STEAEYKALANATAEVMWIQTLLCELGIKVPQAARLWCDNIGATYLSANP
VFHARTKHIEVDFHFVRERVARKLLDIRFIPTGDQLADGFTKPLSTRRMN
EFIYNLNLDRVS

>gnl|PTREP|PTREP110 Retrotransposon, LTR, Copia, "RLC_Ikya_AY853252-1"; (TREP2016) polyprotein
MSCLKKIPTLRGDNYSEWRKKVDMALCIAEVDWVLEEPQPAGPADPVRET
VEDDESWDKKKGNYEKEVMSHSISNMPWLNANKKCLAFIKNTIETTIVGS
IADCPTIKEMLNKIKSQFTGSSKTYATQLIKQLVTESYHGAGHGIREHIL
RMSHTAAKLKPMDADLEIKPALLVHLVMASLPKEFETFVVNYNMQPETWD
IEKVIAMCTQEEERIKASHGGTINYVKEKKKGFPPNKASPSKPQGNGNGN
GNGNGNAHVHYQHRHIQVDRETCVHSKEKGHYKKDCPVFLKTFMAKRGKD
IVSFVNESLYTKFMKSTWWIDSGATVHVANSLQGFNSTITLPRNSRGIEV
ANGVQAEVEAVGDVSLELAGGFKLLLRDVLFVPSCNKNLISVSCLDKDEY
QCFFGHGKCVIWSHNDYVGDAFLHHELYLLSLCEKAPYVLNVNEQSTSSN
NDQKKRKRTHDSSKLWHCRLGHISRGRIERLIKNEILPKFEFSDLEQCVD
CIKGKYVKQIKKGANRSTGTLEIVHTDICEPFPVKSVDGYVSFITFTDDY
SRFGYIYPIKDRHEALDKFKIFKAEVENQLDRKIKIARSHRGGEYYGRHT
PYGQVPGPFAKFLQETGIVALVFHVGEPQQNGVPERRNRTLMDMVRSMMS
YSDLPLGLWMEALKTAIHILNRVPSKSVPKTPHELWTGRVPSLQHLRVWG
CPAEAKMFNPNLGKLDPKTVSCHFIGYPDRSKGFCFYCPDRYTKFVETRH
AVFLEDEMMRGSRVARKIDLEEKRVHAPIPMIQDPFFSLPAVTPTMTTAG
EDPEPVLQEPTEPVVDHELEVQQELVESVPDNAALRRSNRTRRPAISTDY
KVYNTEMAHMEGDPTTYEEAIKSPHSSKWIEAMEDEMKSMSSNHVWDLEI
IPKGAKTVGCKWVYKTKYDSNGNVDKYKARLVAKGFTQREGIDYNETFSP
VSCKDSFRIIMALVAHFDLELHQMDVKTAFLNGDLEEDVYMKQPKGFIME
GKEDLGCRLKKSIYGLRQASRQWYIKFNDTIKRFGFQENVEDNCIYAKFK
HGKYIFLILYVDDILLASNGIGLLQETKKFLSSHFDMKDLGVASYVLGIE
IRRDRKNGVLGLSQKAYLEKVLQKYNMHKSKATPAPIVKGDSFGKYQCPK
NQYELNEIKTVPYTSTVGSLQYAQVCTRPDLAFIAGVLGRYQANPGQEHW
KMAKKALRYVQGTKEIMLTYRRSDSLKIKGYSDPDFAGDRDDRKSMSGYV
FTLAGGAISWKCSKQTIVASSTMQAEFIACFEATGQVIWLKKFIPDLKVV
ACIHKPLKIYCDNQPAVFYAHNNKFSNVVKTIDIKYYVVKDKIQDQTISL
EHISTKYMLADPLTKGLPPSVFNEHLAGMGLMESL*

>gnl|PTREP|PTREP111 Retrotransposon, LTR, Copia, "RLC_Lena_AY853252-1"; (TREP2085) polyprotein
MASGNSIADPSCGHVWPPGKTLPKPPKKLHTNNSEGKERIVINPEYTV*A
REDQQVLAYLLNYLSKEVWKQVASHKKSHAIWETITNIFISTSQSRIKNL
RFSLTDAHKGNQSTAAYLGYMSSLADDLLIAADPITNDQLLVFIIAGLDM
DYQPITSALDVCTATPSMSDFLSIVSNFNQRVEPFGNLGGVFLVIGEHGR
ALSSWGCRFSKIRPHKYDTRSDSAYPGQGSDGHPGPGGSGYRDHNNGYGG
LYAQ*LWRISTRQWRLWWCYRG*SGGYGGGHGNGH

>gnl|PTREP|PTREP112 Retrotransposon, LTR, Copia, "RLC_Oref_1020F19-1"; (TREP1720) polyprotein
LPRSLESPGSSTSTRTNPFAGPDPVLIRYLNILGRVPVVLDHLTSTYYAW
KTYFSLVFCEYNLRDHVDGSVDSRFMENNEEWMTIDATLIRWFYTTISKD
LFHKVVSAEHDAHAVKTKLNGLFTDNALQRKVFLHGELFGC*QYDSSIDD
YCMRLKKLVDELRDLGEKVSDELLLSMLIAGLNNDFRNAASNLPLITDPT
FSKVVAYLKLEERRMRMSRTRATHTALTASTRGGAPPTAPTPQPRPSPSP
FQAPPPPGFSYPQQQPGPAREPLRRPPWPQATAAVGRPGRAPLQQQQPLP
PAPWEAGQNHWMGGCPRAPPSPASLAPARATHQALHAGSSAVRARAALRP
LRALWGAFGRRGHPAPRGASTTAAAVGSGRFHRRPGDPALLAAVHTAPTP
QQYTGGGDWYMDTRATAHMASNPGNLLVAHPVHTAARITVGDGSSMPITH
VGHVAFPSNSMPLSLSNIIVSPDIIKNIVSVRSFTRENPVTVEFDMFGFS
IKDAHTRMVLHRCDSPNELYPVHSSISSASAPMALSTRVDLWHARLGHPN
PATLRHILQSFSFTCNKIDDHTCHACRLGKHVRLPFSTSSHVASYPFELI
HSDVWTSLVASNMGYLYYLVILDDFSHYVWTFPLRRKSDAVATLTAFYSY
VSMQFGRPIHALETDNGKEFDNLAIHNLITTEGTIFRLTCLFTPQQNGRA
KCVLRTLNDCVRTLLFHAIVPPRFLPDALATASLLFDIRPCHTHGNFAPH
HLLFGMPPSYDERCIFGCMCYSSIASTTPHKPAPRSLACIFLGYPPNTKG
HRSYDPISHRVITSRHVYFDEMVFPFQQVPSDVAAFPTPGGSPASLSGDG
AREHLSGHLPALRAPLAPRVKFRPVWLPRGSRPSSGRHPRPQHLSASPAP
ASSPAPPTPPASSAPPAASPAASDVAGSSSSSPVADPDPLPCPMSRSRAD
TLRPSTRYMSYEYLLAASASESSPLPSSARAALWDPHWLAAMQEEFDAL*
WNRTCQLVPRPPRANIITGKWVFRHKTRPDSTLERYKARWVVWPFRQCSG
VDFTDTFAPFVKPGTIHAVLDLAISRAWTVHQLDVSNAFLHDHLAEQVFC
EKTTGFIDAAHPDHVCLLSCSLYGLNQAPQAWYQRIDAFLQMLGFISTRS
DASLFVYHHGAATAYLLLYATAELLQQLTTRLRDEFALKDLGPLHYFLGS
RWFDGQMGFFLHQQRYAHELLERAGMLNCKPATTPVDTKAKVSALEGFPA
SDGAFYRSIMGALQYLTLTRPDLQYAVQ*ASLHMHAPRDSHRTLVKRILR
YIRGTPSMGLTLTASASTDLVAYSDADWAGCPDTRCSILGYCVYLGPSLI
LWSSQRQRTVSRSSAEAECRAMANAVAECSWLRQLLQELLCDIHKATLVH
CDNVSAVYLSANPVHHR*TKHIELDIHFVREQQVVLGRIHVLHVPTAQHF
ANVMTKGLPTSVFEEFRSSLCVSGDASTAGGLEYMVVHVYCISWPTS*

>gnl|PTREP|PTREP113 DNA transposon, TIR, Mutator, "DTM_Oscar_AY853252-1"; (TREP2024) transposase
MPITSDLHWDVYKEQFEKSDDKSIKLFATKVEPPRAEIDLNMLVSSPMDD
RTSLPSVEQMITIDASNAYSQIESDVEFHAPNAIRPTPTREEYKVDVIAS
EEVILKDVDGDFDEVEEGFHGIDIGDLDAYIAQKEMDRELPFWRLYGYDS
DDEGPQEELDEDGFTKEENQIHFELTGLEKITHLFRDLSLAHEAVVDGGM
TKTAIEPTPCPDPGEPREENEDENAYLKKGLKFSSLPAMKVLLSDYAIRN
HMPFYVEHSDRNLRFTVKCVKADEGCIWKVRARKLEETGEWVLRSCVPTH
LCTRPKKHDRKTHRQLTSEYLGYKFMRDIVVDPTVKVGVFMRTAKKLYGY
AVKYGKAWRAKANAIRILYGGYEEAYNRLPRLLGAIAHRNPGMYHVVEDR
HGVFHRDFWCYGQCVQAFNHCRPVLSVDVTFLTGRYKGTLMVAMAHSSND
NVLPVAFALVPLEHQDNWEWFMGHVRHKVIVDNREVCIISDRHHGILKVV
DIVIPGCPKFHHTWCMRHFMANFYRACKSKEFSKDLTHVCVAFTTQAFDA
RYNKLFAAVNAGGKEFLTRNFSEKHKWARAHDDGGRQYGDMTSNLVECFN
NVLKGARSLPVTAIVEYTFFKLNEYFQRHSEETADWIGEKIDYPAKVDEW
LQLQATKSSQPRRQGPWRLVLAT*

>gnl|PTREP|PTREP114 Retrotransposon, LINE, unknown, "RIX_Ramona_464G14-1"; (TREP24) polyprotein
WSRQSFGSVRKEIKDLKRKLDELRGDPLRVAPTHVEIKTNERLIEL*HRE
EIMWRQRARIDWLASGDKNTKFFHMRASLGRKKNMIKTLENSIGVLVDDP
AKLRAMANNFYQNIYISEGVQDIQQVIDHVPGKVTDAMNAVLCTPYTNDE
VKTALFQMFPTKAPSLDGFPALFYQKHWDVCSEDVTKIVLRIVKGEESPE
TINDTVLVLIPKVTTPNLLSQFRPISLCNVLYKIASKVIANRLKLILPDI
ISEEQSAFVPGRLITDNIICAYECLHFMKRSRSRNNSFCALKLDMMKAYD
RLEWTYLRAMMEKLGFASSWIDTFMAMVSSVSFSVLFNG*RLERFYLSQG
IRQGDPISPYLFLIAAEGLSCLLKSSSQSSTLTGIRVAPTAPAVNHLLFA
DDSMLLFKSSVEAEEKVSNLLTIYCNASGQRINAEKSSIFFSKGCPQGLR
DGVKNILNVHNESLNERYLGMPTDVGQSKNGTFKYLRDRV*EKVKGWMQK
LLSAAGKEILIKSVAQAIPVFSMACFRLPRGLCDNITSIIRQFWWGSSRG
KRKPAWVAWDVMTKSKHMGGLGFRDMELFNLALLSRQAWRLLNETESLSA
RLLKVFSYPDVSLFQAELGSHPSQIWRATLDGRDVLAQGVVRRIGDGAST
GIWDHNWIPRASYKRPIASRIAAPPRSVSELIEPSTASWKEELIRAVFTE
FDAEAILKIPLCTRRVADFWSWDEEPRGNFSVGSAYRMLVRTKTTPSSSE
GGSKEWKSIWKVAVPSKIKVFLWRLARHSIPSGDVLHRRNMATSRACGLC
GATDSWRHALLNCPMARCTWALSSEIILDQLSSQQQECPKKWLFAMMRSL
KPDDFIRFSVSL*AIWGARRKALYEGIFKSPHATHGFINSYMTELQFIAP
NTVALGRGSVHHPIWIAPPDGYAKVDVDAAVGCRSRFGAVTAICRDQAGG
FLGASAFIFKHIKDPAILEALAIREGLH

>gnl|PTREP|PTREP116 Retrotransposon, LINE, unknown, "RIX_Stasy_294D11-1"; (TREP1820) polyprotein
MEMKPKRFSLGRNPLSDAPHRNPGVVENGQGPGRHPPGGAPYLDPDTVAS
ERGSGRRILSGALHRRPDVVEIEQGSSHLTRRVRRVRKLAEPRRIRLGSW
NVGSLTGKLRELVDAAVRRGVDILCVQETKWRGQKAKEVEDTGFKLWYTG
TAANRNGVGILINKSLKYGVVDVKRRGDRIILVKLVVEDLVLNVISAYAP
QVGHNENTKREFWEGLEDMVRSVPIGEKLFIGGDLNGHVGTSNTGFEGAH
GGFGYGIRNQEGEDVLSFALAYNMIVANTLFRKRESHLVTFSSGQHSSQI
DFILSRREHRRACLDCKVIPGESVVPQHKLVVADFRFRIRVQRDKRAKVA
RTKWWKLKGEVAQAFKERVIKEGPWEEGGDADNVWMKMATCIRKVASEEF
GVSRGRRSEDKDTWWWNDDVQKAIKEKKDCFRRLYLDRSAHNIEKYKMAK
KAAKRAVGEARGRAYEDLYQRLGTKEGERDIYKMAKIRERKTRDIGQVKC
IKDGAGQLLVKDEEIKHRWREYFDKLFNGENESSTIELDDSFDETSMRFV
RRIQESEVKEALKRMKGGKAMGPDCIPIEVWKGLGDIAIVWLTRLFNLIF
RANKMPEEWRRSILVPIFKNKGDVQSCTNYRGIKLMSHTMKLWERVIEHR
LRRMTSVTKNQFGFMPGRSTMEAIFLVRQLMERYREQKKDLHMVFIDLEK
AYDKIPRNVMWWALEKHKVPAKYITLIKDMYDNVVTSVRTSDVDTDDFPI
KIGLHQGSALSPYLFALVMDEVTRDIQGDIPWCMLFADDVVLVDDSRAGV
NRKLELWRQTLESKGFRLSRTKTEYMMCGFSTTRCEEEEVSLDGQVVPRK
DTFRYLGSMLQEDGGIDEDVNHRIKAGWMKWRQASGILYDKRVPQKLKGK
FYRTAVRPAMLYGAECWPTKRRHVQQLGVAEMRMLRWMCGHTRKDRVRND
DIRDRVGVAPIEEKLVQHRLRWFGHIQRRPPEAPVHSGWLKRAENVKRGR
GRPNLTWEESVKRDLKDWGITEELAMDRGAWKLAIHVPEP

>gnl|PTREP|PTREP117 DNA transposon, unknown, unknown, "DXX_Xitos_1020F19-1"; (TREP1725) transposase
MIVLIQLLTDIYCSLYFFQDEDGDACENDDDADGDECNFDTGYDEYQQES
LDRHWTVMSTTFRTDEEAYDFYNDYAEKRGFSIRRDNLKYSKGIDAHRRL
RRFLCSRSGKRQGKFCTMEGKKRRLRAETRCYCEAHLTVKLDRERSIWYV
SSFSDDHSQTLARPDEVIYLRSHNQIKGIPEARDLSNWADAGLKKHWIYD
NFVSRYGSYALAGFGRRKPYNMCYREKMKLLAKGDADTAIGIMMTRKTRD
PDFFFEHTVDAEGKLKNMFWCDSQSRRDYLDFGDVIVFDSTYKMNRYGMP
FIPFVGLNNHRCTIVFGCAVVSDETEDTYVWLLHTFLRAHCQKKPRSVIT
DGDAAMIRAVRKVLTDVWHRLCSWHIEKNMQKHLHHKSLKEFRALIYYAT
THDEFEARWAAFRAKWESEKTETWLRRMYRKKRLWAASYLTGGYFLGMRS
NQRSESLNSCLHMHLDSGMTIVDMVVHYENCIVRLRENESHDDCLSTQTL
PVAVLDDFKCIEKAAARDFTAVNFYLLQKEMKKAADLEIIDRLSGAVSRR
FIVAWKNNRQLRFKVDYTPSNSEETVKCSCDSMKRKGLPCKHVLYVLARL
NVQDLPRCLVLRRFSKNARGGLSVKRTSDLFAWGWAGTEKRTKYSELTIF
SAEANHAACHKPFLFDKLKAALEDVIANKDVQEEDYVRQHTVAHDDAFVP
NQNHVFVGDPEKINTKGASKGQNNKGHGKEPGVTTNSRPKGFDEKHIRLC
GLCRGNGHFKNNCPQNPKYDHTISLTLFSCLVNTLQIFDVYYNLSMQEHG
MMIIAKKCLNKKNNF*

>gnl|PTREP|PTREP119 Retrotransposon, LINE, unknown, "RIX_Yolanda_AY853252-1"; (TREP2056) polyprotein
RYSLEASLMEIFMGEELF*QCHGSHTCLLQGDANTA*FQEIVNGR*RRSS
FPCDLLEHPDEIRSHVYSFYQEQFSVAPRSGASLADNFRSPADKVSDAEN
TELTLPFLEEDVSAPGLDGFSMVFFKKFWNIIKPVIMPMFPELYSGTFDM
A*TNYGMITLIPKIVGATNIRHFRLITEINVLECIFSKVCVTWLAPLAER
LEHPLQTTFLMGRRIHDGILALHEIAHEMHSCGDKGFFLKLDLQKANDRL
DWSFLRLVLLRRGFIDGWYSLIMQMVQSSKTAINIYSDVGPYFSSSAGVK
QGDPICPLLFNLAIDVLASIL*KNTYGRPYY*GGHHLIPEGGVTHLQYGD
DTMIMVEGSHLDIVNLKFLLLCFEAMSGLKIIFYKSEVFALDCS*EG*LR
IANKLNCKLTEFPTTYLGMPLAELKILATGFDPLVGRVALLMKLCRGRFT
SKGSKTVLIIANLASLTMFMMGLYILSKSVHSSFDKELARFFWQAADGRQ
MYHMGKWAVIFLSKERGGLGIMAFRLMNTALMLQWVWQTLRNDEGLWLQL
LQAKYLRGEPLLACSHTGESQFVQKIKEEIRLGIPFNTSNGEGTQFWLDP
WVRDDPLGVGLPILYSIYVDPSLLVLNIVRQGQWDIRFRRSFRPIETAGW
NCLLDALPDMFPDYPDTVAWHLSPSREFSISLAYQALCR

>gnl|PTREP|PTREP120 Retrotransposon, LTR, Copia, "RLC_Zenia_AY853252-1"; (TREP2012) polyprotein
TCLSLLARAHHITHSCNPGNIDLSSSSLKHRSSSIVVGNGTHLPIHASCS
TTLPPHNFDLKDVLFSPHIVTSLISVRQFTKHNSCSIEFYPFGFLVKDLR
TRKVIMISASSGDLYPFFGNNKAWRTALSTTVSTADVWHRRLGHPSPHVT
SSLASHDFLSPCNKPMHTACQACQLGRQPCLPFHSSPSRTFAPFELLHCD
LWTSPVVSFSGYQYYLIVLDDYTHFSWSFPLRIKSDTSTTLLRFFSYIRT
QYNVIVKALQCDNGGEFINSILRSFFSTNGIAYRFSCPHTSPQNGKAERL
LRTTNDIVRTLLLQAHLPPPFWVEALHTATYLLNRRPSRAVHDHTPYFLL
RGVHPTYDHLRVFGCLCFPNLYATSPHKLAPCSACCVFLGYPLEHK*YRC
YDLSSRRVIVSCHVVFDENVFPYDHTNTPLVAPSPATENPTRISTEIPPT
SYPDLPPPADGTPLCTPIVGRQPAISPPAPRAPPDPAPPDRIPSPSALTP
PASDRSHPPHSAATTQPPTSTRQTTAPAASSSAQSSDPGPSSSAPGPMTS
TSLPAPTTPMQPRLPANAQPVPPPQNSHKMRTRAKSGFCQPQRLFLSHTT
NTISPIPPTYRSALKDPHWQHAMCDEYDALINNSTWSLVPKPAGVNVVTG
KWIFRHKFHTDDSLARYKERWVVHGFTQKEGVDYDKTFSPAIKPATIRVV
LSIATSSWWPIHQLDVKNAFLHGDLKETVYCAQPSGFVDPGKPDHVCLLH
KSLYGLKQAPRTWFHRFRSFLLSLGFHFSKCDFSLFILNQGTSIAYLLVY
VDDIILTVSTPQSLHHVITSLKREFSMTDLGELHHFFGINVTPNTSGLFL
CQQQYALEILERAKMLNCKPVSTPVDTQSKVSAHVDQLLDNPTLYRSLAG
ALQYLTLTRPDISYAVQQACLFMHAPRDSHMQLVKQILRYIRGTTHFGLH
LYKSSSHDLIAYTDADWAGCPDTRRSTSGFCVFLGHNLLSWSSKRQNTVS
RSSAEAQYRGVANCVAESCWLRQLLHELHWPSTRSTLVYCDNVIASYIAT
NLVQHQRTKHIEIDLHFVRDRVNLGEV*ILHVPSSSQYADVFTKGLPSQL
FQEFRTSLNIHSHEVPAEGGC*

>gnl|PTREP|PTREP121 Retrotransposon, LTR, Gypsy, "RLG_Danae_231A16-1"; (TREP1226) polyprotein
APKKKTTVAVGPSKAGHPVPTQASSRPVAERTWGAVREHQHCPSSRSLGG
GDVRAPGNGPHAANSKEGARPSAGGAGPSKIAATPPEGDARASKTPTPGP
PLKRHATNGVITPKTPGVTAGRAPSATPGRSETSPPAEALVKMACDHGVV
IELLLTWSEVEARRDPCRFRCHQHQQKPWCARSCSSIFLPLRGNSMNGEP
LSEALSRWPTKTNRVRWSPGGRCSDGVPRTSGRKAGGAATTVHSPPPRPV
PWTPARRDVMGDKISIALSDPWTHCDQRQVLREREHEDARTTIERRRGAR
HQSDRGAGPVVNHPASESPGGLPYEVGCPAFTRELRQFQWPTHRTFKPDV
GEKYSGKTHPSEFLSIYTIAMQAAGACDDKVLANYFPLALKPNAMSWLMH
LPVDSISSWSDLCHEFVGAFTRGHQAHGQASDLHVIP*KGGESLRKYIQR
FIRIQYNIPDVHPAAIISAFHQNVRNRKMREELAMNKVKDVAELYVLADR
CSRAEEGRKYPSEDTGVEADSSDEDTAAPAKKGRRRNRKRKGKAVLAVEG
SGDTGSTKKTKADDPGKEIAGCVACRALAVAEKPGHSNKRYCKIHCTKGH
ALQDCRQVELLAEKQRAGYERRDKEKGQDGAEGSNKKRDGQAGRRGKDKQ
QERPARGRDKKPEDDDHEEDDESGDQEFQKATKAMCVDGGASLHTSHRHL
KQWAREIRAADPSFDAQRPLKWSSTPIILTLGITLIALLRSGALPLLVSP
TIRDLKVTKMLVDGGAGLNLISPVVVEKLQIPDGDLEEMGTFQGGQPGRS
QPKGKVMLHVTFGSDLNYRTERIVFDVAKIPLPYNGILGRPAVAKFMAAS
HYAYNTLKMPGPVMIITIPSDKKDALISADQLYQQAVAAAAATRALAPAA
GTLGGKKKKKTGETSDTHSSKRTSSECSAPVKDVPESSTGGNKKLRAIPP
RTKKVFVNEDGTGGAFTISSTLDNK*EDALVTFLRANVDVFAWKVSNIPG
VPREVIEHHLAVCPHARPVKQKVRKQALERQEFITEEIRKLEAAGLVRGV
LHPTWLANPVMVRKANGKWRLCIDYTYINKACPKDPFPLPRIDQIVDSTT
GCDLLSFLDAYSGYHQIFMTREDEEKTAFITPCGMYCFIQMPFRLKSAGS
TFARAVQIGFEPQLHRNMEAYMDDIVVKTKDRATLIPDLQETFANLRKIN
LKLNPEKCVFGVPSGKLLGFFVSQRGIEANPDKIKAIEQIEAPKRNKDVR
RLAGCVAAMGRFISKSAERALPFFKILKKAGPMEWMPEAEAALQDLKKYL
SSAPILVAPRPQEPLLLYLAATNQVVSVALVA*REVDDEVMAATEPDTDN
VETTQPVEVPPKKKMMQHPVYFVSSLLQGARSRYSSVQKLLFGLLMASRK
LCHYFQAHEITVVTRLPLQRILHNPDAMGRIVEWALELSSFGLKFESTST
IQSRVLAEFIAEWTATPDEEAQETALPGKEASCSWIMYFDRAFSLHGAGA
GVLLVAPTGEHLKYVIQMHFPREVSTNNTAKYEGLLAGLRIATDLRIKKL
IVRGDSQLVVKQVNKDYQSPLMKAYVDEVRKLEERFDGI*AEYVPRAEND
IANYLSKRAALKLPVEPGTFVLQLTQPSIDPSTEKNKRRKLGHGKYFPDE
LPGAAGKDVAKDTEPATGRLAPAERQALAVETAAPIAEELPLVLAVEPQA
PAWAQHTVRFLQTGELPEEREEAEKVARRSTMY*FVDDVLYRKRPNSVKL
KCIPREEGLELFAEIHEGICGSHIGSRALAGKAFRQGFFWPTALQDATTL
VTKCEACQFHSKKLHQPAQALQTIPLSWPFLVWGLDILGPFPRAVGGFEY
LYVAIDKFTKWPEVEAVRKVTAQSVVKFFKGLMCRFGVPNRVITDNGTQF
IGRTFMQYIQDLGSKVCFASVAHPRSNGQAERTNAEVLRGLRTKTFDRLH
KSGRRWIDELPTVLWSIRTTPNRATGQTPFPLVYGAEAVLPTELIYGSPR
VLAYDDLEQEQLRQDDAMLLEEDRLRAAVKAERYQQALCRYQSRKVHARS
LGEGDLVLRRVQSAKNSNKLTPKWEGPYRVIRVTRPGAVRLETEDAIPVS
NSWNIEHLRKFYP

>gnl|PTREP|PTREP124 Retrotransposon, LTR, Copia, "RLC_HORPIA2_AF427791-1"; (TREP730) polyprotein
MTDSDAESVKSGSGGAKTNKNGDKVKKGVKSATSGGGTSGANVQAHRNIP
IQYPMLTDANYGVWAVKMKIILRSLRVWEAITDDDVDEERDEGAMAAIAQ
SVPDSVLMTLAEFETAREAWNALKEMRIGEDRVTKARAQVLKRQFHKLQM
EETESVNDYAMRLTTLMGEIRALGAKLDESEIVEKFFSSVTDKFTYIIGT
LEQLYDIDDMTITEAIGRLRTWEENARGCRKGKGGGSDQLMYSRTDWEAP
SSKGRCDGGEGSSNTKGDGQTGKGKGKGKPQGRGKAGQSKEQKPRNLDLS
EVKCYNCNKMGHFAKDCPKPNKREIKANLAKQEDEGPGLLMVEVCDLAET
VVVKPSRKVLLHEEKVTPKLSGDQNVS*YLDTGASNHMTGCKEKFLELEY
DVEGSVKFGDGLAVEICGQGSVLFEGLTGEHRILTGVYYIPRLRNNIISI
GKLDENGCKVNIESGVMTIFDNLRNVLARVNRTRNRLYILNLDQSQPECW
LAKSDDDSWLWHARFGHVNFYALKKMSKMQMVSGMPVIDHVDRVCDGCLV
GKQHCRPFPAQSTYRASDALELLHGDLCGPITPATHAGKKYFFLVVDDYS
RYMWFVLLRSKDEAFEAFKKLKAATEMEHKLKVRVLRTDRGGEFTSNEFN
DYCEKIGIKRFLTAPYTPQQNGVVERRNRTVVDMARSLLKSKNLPGIFWG
EAVSTAVYLLNRAPTKAVIGKTPYEAIYGRKPNVSHLRTFGCVAHVKTAE
PHLSKLADRSTKMVFIGYESSSGTKAYRFYDPQTKRLRISCDVVFEENQA
WNWSAAADDAPNSNIFAVEFPTDDDAGEDVQVIGKTPNQGDHNGSDHHGA
DTDDDAHRSQGDSDNAAHDTGGDLDDNIDNEAHSDDDNQDDGHGHDDYAD
DTDVDDTPRSQPSSSSASTPTQFVSPPSQATTDSSGPRRYKTLKKVYKYT
KPVTLEYSGLCLFGVEEPANFVEARKSPSWTHAMDEEMKAIESNGTWTLV
TRPPNQKTIGLKWVYKLKKDTEGAIVKYKARLVAKGYVQRQGVDYDEVFA
PVARIETVRVLLALAAQEDWKVHHMDVKSAFLNGDLTEEVYVEQPLGYEK
KGEEGKVYKLKKALYGLKQAPRAWNSKLDRSLVSLGFKRCPLEHAVYTKN
SKGSNLLVGVYVDDLIITGDSVQEIERFKAQMKNKFSMSYLGLLSYYLGI
EVKQSSGEISLCQSSYAVKLLDKCGMSDCYATQVPMDQRHKLSKRSSNPP
VDTTMYRSVVGSLRYLVHTRPDLAYSVGIVSRFMENPTTEHMSAVNQILR
YVKGTINLGCTYRKGKEGLILRGYSDSDMAGDVDDRKSTTGMVFYLGPNP
ISWNSQKQKVVALSSCEAEYIAASTTACQAVWLRRLLAILAKREVQKVSL
KIDNQAAISLCKNPVHHERSKHIDTRFHHIRECIEEGLIEVQHVNTKDQL
ADIFTKSLGRQKFIEMRRKVGVQEVKSSNKIKEVNVDVNHVAHVGLGKKA
KPSPSSIRIPSPSLFP*

>gnl|PTREP|PTREP125 Retrotransposon, LTR, Copia, "RLC_Ikya_EF067844-1"; (TREP2288) hypotehtical protein 
MQPKTWDIEKVIAMCSQEEKRIKASHGGSLNYVKEKKKVFPPNQNSPSKP
QNKLQGKAPVYYQPKPITVDKDTCMYCKKTGHYKKDCAAWLKVFMAKRGN
FIVSLVNESLYVKFSKSTWWIDSGATVHVANSLQGFSSTRTMCQNQRSIE
VANGVQAKVEAVGDISLELTEGFTLLLSDVLFVPSCNRNLISVSCLDKDN
YQCVFGHGKCTVWYNNDYVGNAFLHDKLYLLSIRDIVNYANNVNVPSSSS
NNEQKKRKRTHDSSKLWHCRLGHISRGRIERLIKSKILPKLEFSELEQCV
DCIKGKYVKQIKKGANRSTGTLEIIHTDICGPFPVKSVDGYDSFITFTDD
YSRFGYIYPIKERNEALDKFKIFKAEVENQLDKRIKITVGGSTTVDTHHM
QETGIVVRYSMSGEPRKNGVAERRNRTLMDMVRGMMSCSDMPLGLWMEAL
KTAIHILNRVPSKSVPKTPHELWTGRVPSLQHFRVSGCPAEAKMFNPNIG
KLDPKTVSCHFIGYPDKSKGFRFYCPDRFTKFVETRHVIFLEDEMMRGSM
VARKIDLEEKRVHAPIPMIQEPFFSLPAVTPTMTTMGEDPEPVLEEPTKP
VIDHARELQQEKIESVPDNEALRRYNRTRRPAISTDYKVYNMEMVHMDGD
PTTYEEAIKSPHSSKWLEAMEDEMKLMSSNNVWDLEIIPKGAKTVCCKWV
YKTKYDSNGNVDKYKARLVAKGFTQREGIDYNETFSPVSCKDSFRIIMAL
VAHFDLELHQMDVKTAFLNGDLEEDVYMKQPKGFIMEGKENMGCRLKKSI
YGLRQASRQWYIKFNDTIKRFGFQENVEDNCIYAKFKHEKYIFLILYVDD
ILLASNGISLLQETKKFLSSNFDMKDLGDASYVLGIEIHQDRKNEVLGLS
QKAYLEKVLQNYNMHKCKATPAPIVKGDSFGNHQCPKNKYELDEMKTIPY
TSVVGSLQYAQVCTRPDLAFITRVLGRYQANPGQEHWKMAKKALRYVQGT
KEIMLTYRRSESLEIKGY*DADFAGDRDARKSTSGYVFTLAGGAISWKSS
KQTIVASFTMQAEFIACFEATGQVIWLKKFIPDLKVVDCIHKPLKIYCDN
QPAVFYAHNNKSSNASKTIDIKYYVVKDKIQDQTISL*HISTKYMLADPL
TKGLPPSVFKEHLAGMGLLESL*

>gnl|PTREP|PTREP126 Retrotransposon, LTR, Copia, "RLC_Ikya_AY853252-1"; (TREP2016) polyprotein
MRAGTKRKEIMKKEVMSHSISNMPWLNANKKCLAFIKNTIETTIVGSIAD
CPTIKEMLNKIKSQFTGSSKTYATQLIKQLVTESYHGAGHGIREHILRMS
HTAAKLKPMDADLEIKPALLVHLVMASLPKEFETFVVNYNMQPETWDIEK
VIAMCTQEEERIKASHGGTINYVKEKKKGFPPNKASPSKPQGNGNGNGNG
NGNAHVHYQHRHIQVDRETCVHSKEKGHYKKDCPVFLKTFMAKRGKDIVS
FVNESLYTKFMKSTWWIDSGATVHVANSLQGFNSTITLPRNSRGIEVANG
VQAEVEAVGDVSLELAGGFKLLLRDVLFVPSCNKNLISVSCLDKDEYQCF
FGHGKCVIWSHNDYVGDAFLHHELYLLSLCEKAPYVLNVNEQSTSSNNDQ
KKRKRTHDSSKLWHCRLGHISRGRIERLIKNEILPKFEFSDLEQCVDCIK
GKYVKQIKKGANRSTGTLEIVHTDICEPFPVKSVDGYVSFITFTDDYSRF
GYIYPIKDRHEALDKFKIFKAEVENQLDRKIKIARSHRGGSTTVDTLHMA
KSLTFCKILARDWHSCLVFHVGEPQQNGVPERRNRTLMDMVRSMMSYSDL
PLGLWMEALKTAIHILNRVPSKSVPKTPHELWTGRVPSLQHLRVWGCPAE
AKMFNPNLGKLDPKTVSCHFIGYPDRSKGFCFYCPDRYTKFVETRHAVFL
EDEMMRGSRVARKIDLEEKRVHAPIPMIQDPFFSLPAVTPTMTTAGEDPE
PVLQEPTEPVVDHELEVQQELVESVPDNAALRRSNRTRRPAISTDYKVYN
TEMAHMEGDPTTYEEAIKSPHSSKWIEAMEDEMKSMSSNHVWDLEIIPKG
AKTVGCKWVYKTKYDSNGNVDKYKARLVAKGFTQREGIDYNETFSPVSCK
DSFRIIMALVAHFDLELHQMDVKTAFLNGDLEEDVYMKQPKGFIMEGKED
LGCRLKKSIYGLRQASRQWYIKFNDTIKRFGFQENVEDNCIYAKFKHGKY
IFLILYVDDILLASNGIGLLQETKKFLSSHFDMKDLGVASYVLGIEIRRD
RKNGVLGLSQKAYLEKVLQKYNMHKSKATPAPIVKGDSFGKYQCPKNQYE
LNEIKTVPYTSTVGSLQYAQVCTRPDLAFIAGVLGRYQANPGQEHWKMAK
KALRYVQGTKEIMLTYRRSDSLKIKGYSDPDFAGDRDDRKSMSGYVFTLA
GGAISWKCSKQTIVASSTMQAEFIACFEATGQVIWLKKFIPDLKVVACIH
KPLKIYCDNQPAVFYAHNNKFSNVVKTIDIKYYVVKDKIQDQTISLEHIS
TKYMLADPLTKGLPPSVFNEHLAGMGLMESL*

>gnl|PTREP|PTREP127 Retrotransposon, LINE, unknown, "RIX_Nala_210J24-1"; (TREP2314) polyprotein
GDFTVHAHHPEDFPILFNSCTAMDNLNGDHFIRSPRFSLSVRPWSKLAHA
GSGQFEYRVKLELQGIPAQAWHLSTAKHILGESYWIERLHPGTRSRADMA
VFRLAGRTHDPANIRRATVLEIVEQIPARVGSDAPTIRNLTYPISIVLAR
SKRNGAPAPRAGAGDGPAGGGAGDGNDPTRGMGPGRARRRGRKRRRTEAP
PAGRADGMAVDFLGWRAGNRVARTDGVSVAPAWPAPPSAAAPPAVHHRSC
AMEPWPGLRGQLDQQRARHGPTNLRGRARKGRRKRRPNQALDVDQSGRAS
DATGDDGDA*RAPAGGPSAAPTLSAEPGHGPSGTPPFTANTLEGSQDLNL
APLDAPKADGLGPASSAPDPRDCRDLPDVCEGPDSQPVPADLSGQSGISP
ALPPDDGPVSADRSSGSHARDAAGREERPTTCPTPPAVVSQPLQAQPTED
PGLSP*VTILQRPQARPPQLGPTWRPARLNAPTRMLIRLLLSASHPRRSP
CAGHALVPLRQAP*RWGNSWPPRPSTSPRPCRRQGGGRAGPSTSPPVAAT
RRPPPPRRRRRPPPRRAHVQILRTLGIIGTNQKITPTEMKAYDGMFAMPI
PIKVLKALRAGRSRDPSMHVQPADRTGTCRGHLYDLGGACPRTPSIHCPW
IMALKITVWNVHVLNSRSLRFAIRSMLDTTTASIVCLQETKMELLRSSVV
LNTLGSEFGDYTYLAALGTRGGILLAWKSRAVTITDPLFTTNALSARVAT
ASGTLWWLSVVYGPQDDADKIVFLLELREIRAACPGPWMLCGDFNLILRD
EDKYNGNLNRRMMGRFRRLVNDLALKEVYLNGRRFTWSNEQSPPTLLHLD
RVLCTSDWEDAHGECHLRCLASVVSDHSPLLLDCSPMPAAHRRFHFEDFW
LRLDGFHDTVVAAWGSVHDPDPFHRLMLRLQATTRRLTSCSAKTTGSIRD
KLTSRELISRFDKAQEDRALSPEEDWLRKRLKVSYLGLASMERTIARQRA
RIATLKDSDASTGFFHRQCSFRRQKNRIFSLAVDGHVLTDQDAMARATFE
HFDGILGTAVDRDLTLDLEGLIEPCDLASLDAPFSVEVWDAIKRLPARKA
PGPDGFTAEFLRACWTIVRQDFMDVFQQLFEMRGRGFRKLNQALMTLLPK
RADAQQLRDYRPIYLIHLVAKIFTKVLVSRNQNAFITGRSLHDNFILVRQ
SLKMLHQLGAPRIMLKLDLTRAFDSISWPFLFEVLRQYGFGDRFQEWLAI
LLLTSSTCVMMNGEPGPPIWHRIGLRQGDSMSPQLFVLVVDTLGRLMRRA
LDIGILQQLHPRRPIPAISLYADDVMLFCHATPKDVAAIKGILTLFGKAS
GLLVNYAKSSATVLHGDIQGHEVIAQLGCPVVQLPITYLGILLSTRRPSA
AKLQPLIDTVAARLPTWKAWLMNKAGRLALVKSVLNAITVHQLLAFGPPK
KTLKQLAKIQRGFLWAGRAMASGGHCHVNWSHVADPSSLVDWESETWSAL
RLRWLWFTRVDLDHAWQGLDLQFSHEERALFFASTTMIIGNGSTALFWED
RWIGGQSVGEIAPLLYQCIPKRRRKARTVAEGLAGNSWAHDIQGILGLHE
ISQYLLLWQAVCHTTLTNEPDRLLWRWTANSIYSARSCYAASFQGSTRCH
S*KLVWKSWAPPRVKFFHWLAAQDRCWTAERLARHGLQHHPRCLLCDQAM
ETIQHLLLTCPFACQTWHIVLDWLHIPVQIPNQEHTVMEWWLRTKELAPP
AHRKALKSIALLVPWMLWKHRNACIFDNAMPSIESLVDRIKDETRCWAKA
GTQGLRVVLPTTWGVH*

>gnl|PTREP|PTREP12 DNA transposon, TIR, Mutator, "DTM_Joseph_AY146587-1"; (TREP831) transposase
MDYAVDWFDNCDSDTWSILWIEDFLKQLGYDKASGHQHDVLWCQPGRTLS
EGMKEMKCDADSLAMVAAMTQHKNLLLIIDHGETLNSLLRDDVLGEGVPE
LPKIVTPRKENKGKENVSSPTVVTEPSMGRKTRARRLFSKGSSSGCADEE
FEEEDAAAGSDSETDEEFFDSDFDVEDGDDDLFEDHVDKEVDDHREKVTT
CDYETELAEDALDDPHIMLSKEEREKLKYHFKGFNPETDLNAPVFRLGMV
FGSVQELRHAITSYSIRKRVSIKKTRNTSKTVEVICTDGCPWYLKAVKDS
RKDSFIVKKYCDEHTCPKTWKLKCLTAPFLTKKFRDEFRDNEKMPLKKFE
EKVQQEYNLIPSRTKLGRARRESVKQIRGDDDDQYNHLWDYGEELRNTNP
GSKFYLCTKEIFDEKLKQTKEHFSTLYWSLDACKRAWLLGGRPIIFIDGC
HIKTRYKGNLLTAVGIDPNDCIYPIAFGVV*VESTSSWE*FMASLKDDLN
IFNTSPYTIMSDKQKGHIAAVSKVWPDAEHRFCVRHMYQNFHKLHKGEQL
KNNLWAISRATNNPTYVKAMDKMLADSVGAYKWVEKWPPRSWIKAFFNPF
PKCDILLNNMSEVFNSWILPERELPILSMVENINNKITTRIYNKQKEVAV
DRKWSGRLCPKIKKKLDKFTDWAAHCMVFGAGQKVFKVVSMNHSYIVDLN
METCDCGRWDLSGIPRHHAIACAREERLILQV*RLDPASLVHECYSVQTY
KKAYGYNIKPVRDREHWRKMNGVDVYPPMYTKVMGRPRRNRKKDPEEKIM
KDGGKKLTKHGVSMHCSVCGRANHNKKGHNMWEENNRDAPQPVRTNADDD
GEEEYDDPSVISVR

>gnl|PTREP|PTREP132 Retrotransposon, LTR, Copia, "RLC_Ivana_EF067844-1"; (TREP2289) polyprotein
MQVMMEGRHLWDAVQTGTAERSDDRLALEAIMRGVPPEMAPSLAGKATAK
EAWDAVKTMCPGVARVREAKLATITKQYSDIRFTDGETVDDFAMRITNMV
AQMAQLGEEVPEKRVVRKFLSVVPKRYSQIALSIETLVDLDALSVEELTS
RLKAAEERYDLEQAETGIDRLLMTMEEWKKCMKRTEADGSSGSGSGGGRG
GGRRGRGRGRGGGRGNSSRAEPTDICRHCKKAGHWARECRTRLRKEANLV
EQGGHAADGQDDDPTLLMAVIATSPSQNAGEQVMLNEEHAEANLGAEEAS
CDGRWFLDPSASNHMTGDRAAFAELDKGVTGSVRFGDGSSVAIQGRGTVT
FTMRSGDHRALTDVYFIPRMKTSIISLGQLDEHGCTTKMQGGTLTLYDCR
QHELAQVRRNGKRLYVVRLDILTPCLSVARTGDEAWRWHARFGHQHFDAL
RRMGRADMVREMPLVDHTEELCDVFLVGKQRRAPFPSHARFRATEPLELV
HADLCGPITPSTPGGKRYFMLIVDDHSHYMWAKMLPAKDHAAASIRQFVA
TAEAKRGTKLRTFRTDRGGEFTSTALSEYFADQGVQRHLTAPYSPQQNGV
VERRNQTVVGMARSMLKAKNMPSWFWGEAVATAVFILNRSYTRSVDGKTP
YEVWHGKKPAVHYLRVFGCIAYVKNTRPGLKKLDDRSTKMVFIGYEEGSK
AYRVYDPLTKRVYASRDVVFDEAASWDWSDGGELNAEPLAIHHELPPITR
AQRMPDTAVEASGVEDTGAPTVTPKAAARPSPSSASPQTAVAVTTPDTPG
RGAPPEGVPGGVEFVTSSTVQPDLFDADDDPVAGHRFRCISDILRRDSEP
AQMAEHLMLAEEEPLSFADAEPHECWRRAMLDELASIKEKNTWTLTDLPA
GHQAIGLKWVYKQKKDAAGVVIKHKARLVARGFVQKEGIDYDDAFAPVVR
LDSVRVMVGMAAQRGWELDHLDVKSAFLNGELKKEVYVKQPPRFAQRGEE
HKVYRLHKALYGLRQAPRAWNAKLDCTLQQLGFTSCPSEHAMYARGEGQG
RLLVGVYVDDLVVTGGDATTIHRFKTKMMGKFRMSDLGLLSFYLGIEVKQ
KAGEITLSQAAYADELLARAGMANCNPVHVPMEPRLKLSKEGPEPRVDAT
AYRSIIEGLRYLTHTRPDITYAVGYVSRFMEAPTTAHLATVKHLLRYISG
TRKLGCRYVKGRDGELVGYSDSDMAGDIDDRRSTSGSLFFLGGAPITWQS
QKQKIVALSSCEAEYVAATTAVCQAIWLSRLMKDLLKEDAGATTIFIDNK
SAIQLCKNPVFHDRSKHIDVRFHFIRRCMEEGRIRVEHIATGDQLADIFT
KSLGRTRFLELARVLVW*

>gnl|PTREP|PTREP14 Retrotransposon, LINE, unknown, "RIX_Karin_AY146587-1"; (TREP832) ORF1 protein
MGEEDLTCRRHGWSRSAATQARATCRCRPGYWRSWSWRSADQHGGRGRPC
STVCAAAGGVGRGASASGQANTTSAAGAVRRPAQGGGGERGVALHPRPTA
TGPVASGVQPRAGTARGTQPSERQGAVASKTNMHQPDDMAQPPTAKVLAL
GRGRGRQGRDGYTGYSRDSQNYNRYGQWGDDVYDAYGEGMHRGSSSGGGR
GYNRYNPDNSGHFQGPPGNFVEGVARPKDRFRGGYRRGGRGRRPPPPRQY
PPPLPPAAEMPSEEELEHAAKGVGDTPTLPAVALDTVRALAAVNVPMTTG
GVKSKDGTSDKGPDKAEGEKLSKWAIKKKKLPCYRCGEPGHFVAELCDYC
LHSQHVTRECPLLSGAKPGINIFWGLLKGVDVL*DPGGGSSTQMIESSFP
AVIRITNG*LTEAQIVRQLREIVPGNYQWHLEQLEGQSYKVDFPTKEDQM
HVLKWGLCKVTNTNIVIAFDEWKQEDP*GYTFWRRCGVRFYGVPPKYVKH
FLIAWSLGGLIGKIEKVDMPFTRAQNAARLLVSVVSIEHIPDVVRWTHAG
VTYLLELKIEDTAVSEAGDGTQDMDTTEGGGAPGDQEKGPDDTMPESDNG
PATTV

>gnl|PTREP|PTREP15 Retrotransposon, LINE, unknown, "RIX_Karin_AY146587-1"; (TREP832) polyprotein
MLRHAETTAGTSFDISCSILHFSENELVDKANDLGISLGSNDTEVVKSVN
DLLDMEAKRASEIIRNLASIQPMNDNDMNSLGINDLANICNNLLPSVETK
DEEEVENTDTVAPLLTEEAVSVIDNNIVPQGVGEKPKRPWKRKIYPTSAV
RRSARVKLKKKFHDDL*KDSFENSRGLADLAKQRFLAKTTLEHHLDFVAL
LETRRDNFTSQFLQTLSSGIDFDWHILPPRGRSGGILLGVRCETLEVLNV
VQGYFSVKFRVRLKLDGFRWSLVAVYVAAQAEFKPDFLADLVRICGDENL
PVLVGGDFNIIRRREEKNNDNFDGRWSMMFNMIIESLNLREIELTGRQFT
WANSLPVPTYEKLDRVLASVEWEQKYPLVSVHTTQRAISDHTPLFLDLGE
ATHVAKKNTFSSEQSWFEREGFMDMIAREWAKPVMGRTHVERWQNKVRPL
RQFLRGWARNESGIYKQKKERLTKLIEALDVKAETTLLSVHEHRTKSEAG
QGLRALLREEELKWALRAKMLKVVQGDDMVANGKHRKKKIIQLEQDEGTI
VGHENLKSYISNYYKSLFGPPNTSTVSLDESVIDDIPQLQAAENDVLSAP
FTEKKVHLAVTQMKPNKASGPDGFPAEFYKKCWHIIKYDLMPMFHIFFEG
HLELFHLNFGTITLLPKKKDQIEQFRPICLLNVSFKIFTKVGTNRLTQIA
HSVVQPSQTAFMPGRHILKGVVVLHESLHEIHSKKLNGVILKVDFEKAYD
KVKWPFLQQAMRMKGFSETWRHQVDTQVQKGSVRIKVNDDIGHYFQMHKG
LRQGDSMSPLLFNIVADMLAVIIGRAKQHGHVEGLVPHLVDGGVSILQYA
DDTIIFMEHDMSKARNMKLILCLFEQFSGLKINFHKSEVFCFGKAKDKEH
TYRQLFGCELGALPFSYLGIPIHHRKLSNKEWKVIEERIEKKLNCWKGKL
MSYGGRLVLINLILTSMPMFLLSFFEIPKGVRKRLDFFRYRFFWQSDEAK
RKYRLVCWDILCRPKDQGGLGIENLKIKNKCLMRKWLYKLGTEPEGMWSQ
ILRNKYLHSKTLARTTIRPTDSPFWKGLMRTKDLFFCRVKFLVGNGMSTR
FWKDTWLGETPLALQYPTLYNIVQRKEDYVGIVL*TIPLNIQFRRTLVDA
RWTAWMHLVRRLIEVRLSDVPDSTQWKLTKNGIFTVKSFYADLINSAPSQ
GHFIHGKVKVPLRIKIFMWFVHKQVILTKDNLLKRRWVGNSRCCFCAKMR
QYNIYSLNAHLPNYFENDLYSFQYNPPVDIASLFGTWLAGVEQITAAHIR
IGICALLWAIWNCRNDMIFNRQHNLTFLQVIFRATAWIRTWPLLTPMDSR
EPLITGCNQWEMVARAIFNRFGWRSHNRIK

>gnl|PTREP|PTREP16 DNA transposon, TIR, CACTA, "DTC_Clifford_AY146588-1"; (TREP774) transposase
MNR*WMYSDRHTRESFKGVHEFLDAAEANKQNGFMCCPCTECGNTRSYSN
RKIVHSHVLYKGFMPHYDVWMRHGEIGVMMEDGKEEDYDDNYVSPEYGDA
ATGGAGEDQEEPDDVPNDAATGEAAEDQEEPDDVPDDDDLRRVIVDARTQ
CESQKEKLKFDRMLEDHKKGLYPNCEDGNTKLGTVLELLQWKAENAVANK
GFEKLLKILKKKLPKDNELPDSTYAAKKVVCPLGLEVEKIHACPNDCILY
RGAYKDLNACPVCGALRYKIRRHDPGDVDDKPLRKRVPAKVMWYAPIIPR
LKRLFRNEEHAKLMRWHSENRKKDGKLRAPADGSQWRKIERKYWDEFAKD
PRNVWFALSTDGIKPFGEQSSNHNTWARDSMYDNPPPWMCMKRKFIMMPV
LIQGPKQPGNEIDVYLRPLGFKNFYHLWNENGGRTGNDHRQEEFNLKALL
FVTINDWPALSNLSGQTNKGYHACTHCLDDTESIYLDKCRKNVYLGHRRF
LPTNHQC*KKAKHFKGEADHQKKPAMRTGDHVLAMVNDLHYVIF*KGPGG
LAVPNDAEGHAPMWKKKSIFLDLPYWKDLEVRSSIDVMHVTKNLCMNLLG
FLGVYGKTKDTPEAREDLQHLHEKDGMPPKQYEGPASYALTKEEKEIFFE
CLLSMKVTTGFSSNIKGIINMLEKKFQNLKSHDCHVIMTQLLPVALRGLL
PENVRLAIVKLCAFLNAISHKVIDPEIVPRLRSDVAQCLVSFELVFPPSF
FNIMTHVLVHLVDEIVILGTVFVHNMFPFERFMGVLKKYVCNRARPEGSI
SMGHQTEDVIGFCVDFIPGLKKIGLPKSRYEGRLTGKGTLGRDSIICRDG
YSWSQAHYTVLQNSTLVTPYVDEHKNSLRSKHPEQCDDWITCEHIRTFSS
WLETRLKGDNTVCDELYLLSRGPSLTVLTYKGYEINGNTFYTISQDQKST
NQNSGVRFDAATESGKDTYYGYIVDIWELDYGPDFKVPLFKCKWVNLLGG
GAQVDPQYGMTIVDLKNLGYTDKPFVLANDVAQVIYVKDMSTKPRKRKDK
EENTSYDEPKRHIVLSGKRDILGVDGKTDMSEDYEKFHEIPPFNVKADPS
ILINNEDYAWLRRNKQMTQAKKK

>gnl|PTREP|PTREP17 DNA transposon, TIR, CACTA, "DTC_Clifford_AY146588-1"; (TREP774) transposase
MNRQWMYGDTHTREYIKGVHEFLDAAEANKQNDFMCCPCTECGNTRSYSN
RKILHSHLLYKGFMPHYNVWTRHGEIRAMMEYREEEHYDENYVPPEYGDA
ATGGAGEDQEEPDEVPNDATTGEAVEDQEEPDDVPDDDDLRWVNVDARTQ
CESQKEKLKFDRMLEDHKKGLYPNCEDGNTKLSTVLELLQWKAENAVVDK
GFEKLLKILKKKLPKDNELPDSTYAAKKVVCPLGLEVEKIHACPNGCILY
RGAYKDLNASPVCSALRYKIRRDDPSDVDDEPPRKRVHTKVMWYAPIIPR
LKRLFRNEEHAKLMRWHSENRKNDGKLRAPADGSKWRKIERKYWDEFAED
PRNVWFALSTDGINPFGEQSSNHSTWPVTLCMYNLPPWMCMKRKFIIMPV
LIQGPKQPCN*IDVYLRPSVEELLQLWNENGVRTWDEHRQEEFNLKVLQF
VTINDWPALSNLSGQTNKGYHACTHYLDDTESIYLDKCRKNVYLGHRRFL
PTNHQCRKKGKDFKGEADHRKKPAMRTGDHVLAMVNDLHYVIFGKGPGGL
AVPNDAEGHAPMWKKKSIFWDLPYWKDLAVRSSINVMHVTKNLCVNLLGF
LGVYGKTKDTPEAREDLQRLHEKDGMPPKQYKGPASYALTKEEKEIFFEC
LLNMKVTTGFLSNIKGIINMPEKKFQNLKSHDCHVIMTQLLPVALRGLLP
ENVRLAIVKLRAFLNAISQKVIDPEIMPRLRSDVAQCLVSFEMVFPPSFF
NIMTHVLVHLVDEIFILGPVFLQNMFPFERFMGVLKKYVRNRARPEGSIS
MGHQTEDVIGFCVDFIPGLKKIGLPKSRYEGRLTGKGTLGRDSIICRDAY
SWSQAHYTVLQNSTLVTPYVDEHKNSLRSKHQEQCDDWITCEHIRTFSSW
LETRPRGDNTICDELYLLSRGPSLIVLTYKGYEINRNTFYTISQDQKSTN
QNSGVRFDAATESGKDTYYGYIVDIWELDYGPDFKVTLFKCKWVNLLGGG
VQVDPQYGMTTVDLKNLGYTDEPFVLANDVARVIYVKDMSSKPRKRKDKE
ANTSYDEPKRHIVLSGKRDILGVDGKTEMSEDYEKFHEIPPFNVKADPSI
LINNEDYAWLWRNKQMTQAKKK

>gnl|PTREP|PTREP18 DNA transposon, TIR, CACTA, "DTC_Caspar_AY146588-1"; (TREP775) transposase
MSRQWMYDDRCSPQFVEGVHTFLLAAEANKRADGFMPCPCARCKNDHNYS
TSRTIHVHLFMSGFMPHYNVWTKHGERGVMMEDNEEEEDDDSYPGHGFPE
YDDTTMGEEAEPVMREEAEPAIREEAEEEASDEPVDDLGRAIADAKRNFA
SDLEKKKLQRMLEDHKKLFSPNCVCAKKKLGTQLELLHWKAENCVSDKGF
GKLLVMIKDMLPKDNELPESMYEAKKAFCLLGLVVQNIHACPNDCFLYRG
EYEDLNACPVCGALCYKISRDDPGDVEGRHPRKKIPAKMMWYAPIIPGLK
RLFQNKEHAKAMLWHREDRKKDEKLRVPADGSQWRKIERKYGKEFEDDAR
SVWFGLSADGINPFGEQSNNHSTRPVTLCLYNLPPWLCMKQKFIMMPVLI
QGPKQPGNDIDVYLRPLVEELLQLWNGTGVRAWDEHMGEEFDLKALLFVT
INDWPALSNLSGQTNKGYHACTHCLDDTDSIYLANKIVYLGHRRFLPSRH
PVRKKGKHFKGEVDHRTKPHHRTGADVHDMVKDLKVVFGKGPGGHPVPND
VDGRAPMWKKKSIFWDLPYWKDLVVRSAIDVMHVTKNLCVTLLGFLGVYG
KTKDTPEAREDQQCMHGKDGIHHGHASYALTKEEKEIFFECQLSIKVPSG
FSSNIKGIINMAEKNFQNLESHDCHVIMTQLLPVALRGLLPENVRLAIVK
LCAFLNAISQKVIDLEIIPRLQNDFVQCLVRFELVFPPSFFNIMTHVLVH
LCEEINVLGPVFLHNMFPFERFMRVLMKYVHNRARPEGSISKGRQNEEVI
EFCIDFIPDLKPTGVPESRHKGRLDGKGTLGGEQIICMDGHSLTEAHYTV
LQNSALVAPYMDEHKNLLRSKQLERSDDWITRDQTRSFASWLQARTMHDT
SIEDDLYLLSQLPSSNIMTFKGYQINGNTFYTIAQDKKSTNQNSGVRFDA
ETKTGKETYYGYIQDIWELDYRRGLKVPLFRCKWVNMTRGGVTEDPQYGM
TTVDLNNFAYADEPFVLANDVAQVIYVKDMSTKPRKRKDKEANASYDEPK
WHIVLSGKRNIVGVDEKTDKSEDYEKFDEIAPFTTGISYFVVCHGGRQRH
ERRTARAFAVSGRRQKAPAK

>gnl|PTREP|PTREP20 DNA transposon, TIR, CACTA, "DTC_Caspar_TREP788-1"; (TREP788) transposase
MSHPWMYGDRRTTSYTEGVHSF*DAADANKHGGDYMFCPCVECRNEKDYT
SSRVIQSHLLRSGFMSGYNIWTKHGERGVMMEDDDEEEENSDANYRSMFP
EYADTAMEDNEEEDQDEEREPDEPADDLGRVISDARRGCDTEKDRLQFEH
MLRDHNKLLYPTCEDGQKKLGSTLELLKWKAKTGVTDSSFEKLLVLMKKM
LPRKNELPASTYEAKKLVCPLGLDVHKIHACPNDCILYRGEKYENMDKCP
VCTALRYKIRKDDPGDIEGEPPRKRARRFAADARNLWLGMSTDGMNPFGE
QSCSHSTWPVTLCIYNLPPWLCMKRKFIMMPVLIQGPKQPGNDIDVYLRP
LVDELL*LWAEPGVRVWDEHKQEEFDLPALLFVTINDWPALSNILGQSNK
RYNACTHCLDQTESIYLDNCRKNVYPYNRRFLPLNKKGKHFNGKAEPRGK
PVIRTGAEVFDMVKNLKVIFGKGPGSQPVPNSPDKRVPMWKKKSIFWELP
YWEVHEVRSIVDVMHLTMNLCVNILGFLGLYGKSKDTPEAREDQERHKGR
DGMHPGQFQGRASYALTKEEKEIFFEVLFSIKVPTGFSSNIKGIVNMKDK
KFQNLKSHDCHVLMTQLLPVALRGILPENVRLAIVKVCAFLNAISQKVID
RESLSGLQIDVVQCLVSFELLFPPSFFNIMRHLLVHLVEEIRILGHVFLH
YMFPFERFMGVLKKYVRNRARPEGSISKGYGTEDVIEFCVDFLRDLKPIG
VPESRYEGRLTGKGTLGRKAKVCMDGHSFSQAHYTVLHNSTVVAPYIVRH
KNILRSENPGKADSWIKGEHEKTFGNWLQTHLMNDDTVGDELYCLARPPS
STICTFQGYEINGNTFYTVAQDKKSTNQNSGVRFDATDENGHCLETYYGY
IEEIWELDYGPTFKIPLFRCKWVKLTGGVVVDQKYGMITVDLNNLAYMDE
PFVLANDVAQVFYVKDMSTLTRKRNQQKKISSDGPKRHIVLSGKRNIVGV
DDKTNMSEDYNKFHESPPFKVKTDPSILPNHEDSPWLRPRRKQK

>gnl|PTREP|PTREP22 DNA transposon, TIR, CACTA, "DTC_Clifford_AY146588-1"; (TREP774) ORF2 protein
MLEIFVETMDTTQDEAKEALLRDIIAEGSDAVSLFLNDTDGLEGEGEEAG
YGDLMPVQEGEHEDGSGDPMPVQEGDHDDGSDDRTESSQVYILVKPRRGP
KKKLSSDEKFEIIAIAPDGQPIEPIRTKNAFVAQ*GVLVRDKIPISIQQW
FKPATEDPEVSYVNDMQKNDLWTELKSNFTLPPQDNPENPVKEQLIKSFA
LKRMAELFRRWKKELNKFVENNETPEFKG*YEKIRDH*PAFVAHKTSEKS
KKMSATNKQNAAKKKLHHRTGSGGYLVARPKWANTENDLVDKGIEPETIS
WPDRCRTWFFGAGRTLDPVTGKCIWTNDQMDIPVRKLNQYIEAAQQGKFF
PDRENDELTMALGNPEHPGRTRGTPGSIPWKVGFPDAGGYKSHERRKKVQ
QTQMQALQARVDAIEEREANRNKRTAEASPEATPPSQRRSSVASTELLQP
EHALTAPASYPVDAIMESQNCHLMTQWMNLKVKAGVGSVYPTEPGATFHC
*PIPKGYARVMVNEITEGFEDLQLDHPTGEGETRLGSAMKTPCLWWKELI
NLPNWTPPPPPASKSTPPPPPPPHPESDDQGPRPAPSPARGGTSPAPAHP
SSLPPPSPPR*QGRKRPAAAPAAAPARRSPSPPPRKQVKKTTASYARPAS
SSTTRGGRSYRFGPSLKSPQKLPYERTPEENAKITRTEVDDWFQGLKAKR
HPPPEEKVDPVKVKRTLAALAKPPKSPPKGNYERIIAKTWAEAERLGSTV
SDQRLKERRAVGKQIAQLGEQVKQSCPPLKVPSDIVDPRMVPGYGNVDDY
LPDDVHYDPMEVQIHRYEYGKPLVKDEKSLTTMMRRLHDWYLKICRESGG
GGTTWYARVKPEHDLV*IELLPIPFEEFYQFFNQLALDKTMITCYCLLKI
AELKKRQIGDIGFVNTYLIDGTEVEHRPEDTEANLATIIQKNENKYIILF
PYNFNFHYILLEIRLEQGVVTVLDSKRKDPQEYADITEILKKVWKKFTRK
VSGLPKELKFRHPKWLWQKQGNDLCGYYVCESIRHTTCERGGYSDEQYER
DELLAPARMRAIQEELAAFFLDHVIAEDGEYYVDHESV

>gnl|PTREP|PTREP23 DNA transposon, TIR, CACTA, "DTC_Caspar_TREP788-1"; (TREP788) ORF2 protein
MDPHIRNLEEEELLEDIIKDGGPDVEPAESPTSYLNNSVYGMEVERHEYE
ADGAGDRSNDGDGEAGGEAGEEIIKSGEASTSSKSTKRGPTRKLDARTHY
TFEVIMPTGEPKLPKNAADTFEKQCGVLVRDHVPISVREWNKRKGAADSD
YVAERYKDNLWNDLMSHFNLPECENEDAADKLRAKVKQWTLKKMAELFRS
WKKKLWKNYLKTKKVPVFEGYLAKQANHWKEFQEYKESEDAQALSEKNKI
NADKKKYHHKLGPGGYETAIPKWEKKEQDLIDKGIVPEPLRDEWELRARN
WFLAHGGSYDETTGDLICNDNLRIPRENWKRIVKEIKGGQRKFTADRDKD
LLTLVLGNDEHGGRTRGFGPSYPWWLGFAKDQDTYRSRERAKKRQQDEEN
DKFNQLLARINEQQKQIDELRGVPRQEDPALDITGAPSKRKSSVAESKAP
RDDERRMIEGGPGYPVDGIKESTSCELHQKFKNISMKVAVGQALPSGPDA
RCKGCEIPAGFAKVGVDEIMTVFNDMELDIAGPEDERTLGEVLGGVILWD
KNYIKLPGSAPRTTPPPSRRRSPTPPLPPSPPYDVGQHSTSPSRSPPPDL
GRPSPPPPAPDTKPEPATDTKRERATKNAPPPPAPDTKPEPATDTKRERA
TKNAPPPPAPDTKPEPATDTKRERATKNAPPPPAPDTKPESATDTKRERA
TKNAPPPPAPDTKPESATDTKRERATKNAPPTIPNPQSTPKRKRSPLPKV
RHANLPIGPYDRTPEENARIAKEHHDAQMKKKEPEPRPKYTQKQIAFAKY
FRTLPSQYELHHKPDDYTRTLQKEVKKSRSRASPPHDVGQHNTSPSRSPP
PDLGRPSPPPPAPDTKRERATKNAPPTIPKPQSTPKCKRSPLPKVRHANL
PIRPYDLHHKPDDYTRTLQKEVKKSRSRASASGSKSSSTTSKKKSYVPQL
GQQAKQSIPPLKVLTENVPPTVQGLALERAKELVAACGVSVEELMSSQDD
KIPKAVVAPKPQFVMGEPLVSKDDLPANMRYLHQWYLSELKNGRTMIVLS
VPQEYYVGRPEQIHIDFDELFQMYNGDALDKSLMSCYCLMKILDCKSKSI
LNIGFIDPDKIHIVTLTNYPKETEENLLRFLRDQNFCDHILFPYNFSSFH
WILLDIQIDKEKIDAFDPLSRPLEQFQSLQDMLQGVWKRFKCVTPGKFPE
KLTFRAAQCDQQPRGTHLCGYYVCETIRTFTSELKDHRFDVSNEHSHLYF
YPSFFVIMIDIHIHLLFLYSTRPRRSYQSNARLLLQRSLRDF

>gnl|PTREP|PTREP24 DNA transposon, TIR, CACTA, "DTC_Caspar_AY146588-1"; (TREP775) ORF2 protein
MFDIIRGPDDDQNEEDFDASEFLNNTGEGDMIFDHDDREDEVMNYDEEHV
DPETTNTGEPSGSSKSSGKRTKRGLNKKLKEGVKYNIEAFKPNGEPLAPK
KIADKFVHQCGVLVEDQLPISLQEWRKPAKPRPNVTFVDENKKNCFWDTL
MEHFTLPDHFTEADVRKVKDATFRKMAVAFKNHKRTTWEKYVKGGRKTPV
FEGILENQSAHWDDFVKFKDSELAKERSRINKKNAEKKDKFHKLGPGGYA
VAMPKWDKSEKEMEDASVTAVTKSCPPRCRTWFYAHGGELDPKTGNVSTK
ACLNGADDVLLVAIEEARSGVFQPNRENDELTRALGNPEHPART*GKGAI
PWYEGFSDWNAYYRTRARKKIAEEKKRKMEEEKRKRHYERLQGLEASQAE
LAAKF*R*QEQIDSLSQQRGSQQLQQLADDPALDTTAPSMPRSSVGSTPG
DAVLDRYPVDDITENTNCELHFKLKNISMKVADAVAFSNSPDATFHCNPI
PAGYARVLVDEVVDPYSELQLDIPGGDDEHTLGEAIHRVILWRKDCIIFR
KPPTPRHPTPRRSPPPSQQTPAPSPPTREATPPPPSPAKCQATPPPSPTQ
RQTSTPPPSPAQPQATPPPCPAQLQATPPRPTQPRQPSPPPQQSQKRHPA
AMVRSGTSRSDSHEV*AEAPDINMVQTLSTPCSCEVLR*DREANPIPIVG
AGVQPPFGPKPPPPPPREKSACGSS*PPSLVWLNPQLLRLLPQTMSATCA
KLHRQRLQKEGRARARAKEQAAVKKWGKTVAQLGKQAAQSIPPLVVPPTT
LDSTRAQYYCGQIVYIPEVGAVVITQEHVMQAEELKITVGQLLEIEDMPL
ITEEEIKWKYVRGQPLVKPEDVNKLPMRMYELHQWYMDIIKRSDRESLMV
YVKKDDYYHGKAVAVEYSELFQLYNQAALDKSIVSCYCLMKMYEMRKGGR
YGVGFIDPNTVNEYTWKINKHHEKEVEDSMPEFLKRLKYNEDIMLPYNFQ
YHWILCIIKVDAGTVEILDSLLKANSDYNILFGIVNRAWARFISVTPGEW
KPHLKCFRAKGTDLCAFCVCKNIRMMASERSRSQRQEWVRLSEHYSQFLH
HYRYLVTQLIHMHIDLLLNSSKRCGTSS

>gnl|PTREP|PTREP25 DNA transposon, TIR, CACTA, "DTC_Clifford_TREP770-1"; (TREP770) ORF2 protein
MDPRDEATEALLGDIIAKGSDAVLSYLNDTDALEGQGEEEDYDYDGSGDT
MPVQEGDRDDGSGDPMPVQEGDRDDGSGDRTDSGQVYILVKPRFEITAIA
RDGKPIEPIRTRDALGAQCGVLVWDKIPISIQQWLKPKKEDPEVSYVSDM
QKEDLWTTLKANFTIPPERIRRSQLKEQLIKSHALKKMAELFRRWKNELK
TEFVDKELTPEFKGKYEKIRDHWPAFVAHKTSEKSKTMSATNKKNAAKKK
HHHRMGSGGYLKARPLWDKAENDLVAKGVEPETLNWPDRCRTWFFGVGRT
LDPVTGKCVWTDEQLRIPVTKLQHYINAEQQGTFVPDREKDELTMALGNP
EHPGRTRGTPGYVPWKAGFSDAGGYKSQERRKKVEHSQLQAAARVLGLEE
REANRSKRPAEASPEATPPSQRRSSMASTEQLQLEPVFTAPASYPVDAIT
ESQHCHLMAQWMNLKVKAAVGFVLPTEPGATYHCRSIPEGYARVMVDEIT
DGFEDLQLDHPTGEGEIRLGSALKTPCLWRKEFINLPNWTPPPPPPPPAS
QGTLPPPPPPPPASDQGTQPPSPARGGTPLPSPPAPARPISQPPPSPPRQ
QGRKRPAAAPAAPARRPSPPPRKKGKTVVAAPSAPSSSSTARGGRQYRFG
PSLKTPEKLPYERSLEENTKVV*AKVKNFFEGVKAQKHPPPEEKIDPVKV
KRTLAALRKPPKSPPKGNYERILEKSFVQAEQSGSTVSDQRLAERRAGKK
IAQLGEQANQSPPLLQVSTDIVANDPGGMVPGYNNPGDYLPDDVHYDFLE
VGEHRYVYGKPLINDERSLTTMMRRFHDWYMKTCRESEGRNILTLSVREE
HDLVGIELLNVPFEEFFAFFNLKALDKLMVTCYCVLKIAELKKRQVGDIG
FINTNLIDAYMVKSHARDTEAKLLQSFVLNQNKAIILFPYEVKYHYILLE
IKLEQGLVTVLDSRRKDPTEYADLTEILEKVWKKFTSKTPGLPKKLQFRY
PKWLWQEQGNDYCERGYSDKQYEIFRMRDELLPPDRMRAIQEELAAFFLD
HVIAKDGEYHVDPDQLVFN

>gnl|PTREP|PTREP27 DNA transposon, TIR, CACTA, "DTC_Balduin_AY146588-1"; (TREP773) transposase
MSDRAWMYTGHTGQNKWSAEWFTKTKGFVQAAFANGQKKTWCPCFRCGNW
EKKTEAEMGKHLQKSGFTPDYTVWTFHGESAQRDRAEVDRRRTGEHGTGM
ENMVQDYDDARDSDEEMEESAKAFNEMLESSKRPLHEHTELCQLDAISQV
MALKAQFNLGRECYDAIMTVFGRFLPKGHVMPANLYQSDKILRALKMPYE
KIHACEKGCALFRLDYADLNYCPICKSSRYIVVDNGMGEKTQTKIPVSVL
RYIPIVPRLQRLFMVEETARQMTWHKTGKRTELDADGNLMMVHTSDGVAW
KKFDELHADKAADPRHP*VGISTDGFSVFGMTAAQYSCWPIFVFPLNLPP
GQIMQRKNIFLTLIIPGPNYPGKNMNVYMQPLKDELQEAWDNGFKTYDAF
SKRNFIMRVWYMYSTHDLPAYALFVGWCVHGRFPCPTCKGALEFRWLQAG
RKFSCFDMHRQFLDPRHKFKKDKKNFIRGRVVKNSAPPALTGQQTLDELN
ALEPDPQRPGYFKGYNTKHAWTHKTCLWDLPYFKDLLCPHNIDVMHTEKN
IAEALFGTLFGIDGKSKDNTKARVDLEALCDRPLQNMKEPKGKQNWTKPK
AWFNLGRPAMREILLWVQQQLMFPDGYAANLKRGANLDKLKIFGLKSHDW
HIWIERVMPVMLRGFIPEDEWLVLAELSYFFRVLCAKELSPGVLEEMEEL
APELICKLEKIFPPGFFNPMQHLILHLPTEARLGGPVQNRWCYPTERMQK
TLREKCKNKRRIEASMAEAFITEEAANFVTAHYEAKNRHLHNPKPRYNAD
EPKKGGSNLSLFKGNLAPASVSHPVSLDNEEWRTISLYIFNNLIEVRSYI
EKFSVHCFATSISFELLLFLDMSYSRYVTIFSYGAEIQKDSVEEYELLAK
QGGGYPGFISWFKQTANSESMDAELRQVANGFDYKVRSFDKYDINGYRFR
TYGKELSMVDRKSTNFCVSAIGEGGTEYYGKVEAIYELLFYGENPPNVVV
FKCYWFQPKETRRTHEHVGLVEINQSTHLDVPDVYIMAQQATQVFYLPWA
CQTNPNLKGWDVVYEVPPRARLSPPKEEDYEPHINPDTYEGEFFQETRLS
KKRFKNHYTSPQNIEVDSDNESDITPEEEQEEPEQEEVTAADDLSMLDRL
RQGGLAHVDANEPYEPVIDYSDDDDYAFIDDTDRDY

>gnl|PTREP|PTREP28 DNA transposon, TIR, CACTA, "DTC_Isaac_AY146587-1"; (TREP782) transposase
MADNQWMYSGFIRRNRVTSEWIAKTDVYLKEIFRRPMRIIPPCPCARCAR
RHRRNQTDMSEHLRTHGYMPNFDMPPINIAEQDHGREEVMRQRINRYEDD
GVRDMLMHVIVADSANATPSENEPEDPEATAKAFLEVLASSKKPLYAGAK
ISQLDAISQLIAVKAEYGCSQKCFEAFLGVWANSLPEGHELPKSMYDTKK
IMKALSMDYEKIDVCPKNCFLFRHEYADDKYCRKCGSSWYIEVVGEDGEK
KQLTIPVKVLRYLDFIKRLQRLFITKESAKMMKWHKEGIRYNPKKIIHPS
GGEAWKSFDEEYPEEAAEAGNVRIAISGEGLNPYGMSSNPYSCWPVFVIP
LNLPPGALMQRKTMFLSLIIPGPDYPGKQLGVFMQPLVDALHHSWHFPRL
TYDRDLQRNFLMKVWLHYCMHDFHGYALFCGWCTSGKMPCPVCMQALRMI
WLSKGGKYVAFDLHRQFLPPDHPDREDKKNFMKGRVVHEVTEIPTFSGAD
VLAQLKALKPKVKGKGKAKAKGFEGYGETHNWTHITPFSELPYFKDLKLP
YNIDVMHTEKNVAESFSTRSSTFLIREGYVKARADQQRICDRPRLNMKPP
TGGRKNWFKPDADFVLKPPEKKEVLIWLKQILKFTDGYASNISKGVNLST
GKVTGVKSHDYHVWIERIMPVMVRGYVPEHVWRVLAELSHFFCMLCAKEV
SKEVIEKLHKKAPELIVKLEKIFPPGFFTPMTHLILHLANEVLLGGPVQN
RWQYGPERQNKHLRRKCGNKAKIKASIAEAVILEEVSDLRTSYYPDHVPH
LHNKVPRYNIEEPKYQPRLDLFNAQGRRAGASKSYNMPRQEWEHLMFYIL
HNIKEVEEVWMSDFVQEEWTGVNPPTEAEALTLLRHGNPGRKNFVAWFMD
KGKDLNISMDDELRWVSMGFDPAVMTCKKYDVNGYRFHTEEHQNSRPDPK
TINTRVYTPGQNSVDYYGRVQNIYEVKFRQGRETLSLPVFKCRWFDPREG
VKHTPSIGLVEVKPSTVYAGADLFIAATQATQVYYLPYPCQKVYLKGWEV
VFKVSPHGKLVTC

>gnl|PTREP|PTREP29 DNA transposon, TIR, CACTA, "DTC_Donald_AF427791-1"; (TREP748) ORF2 protein
MDPHIRNLEEEELLEDIIKDDPDVEPAESSLSYLNPSGYGMEVERHEDEA
DGAGDRSNDGEGDSSTDGEAGEEIIKSGEASTSSKATKQGPTRKLDARSH
YTLEVILPTGEPKLPKNAADTFKKQCGVLIRDHVPISVREWNKRKEAADS
DYVAERYKDNLWNNLMSHFNLPECENEDAADKLRAKVKQWTLKKMAELFR
SWKKKLWKNYLKTKKVRLFEGYLAKQANHWKAFQEYKESEDAQALSEKNK
INADKKKYHHKLGSGGYETAIPKWDKKEQDLLDKGIVPEPLRDEWELRAR
NWFLAHGGSYDEKTGDLICSDSLRIPRENWKRIVKEIKEGKRKFTADREK
DLLTLVLSNDEHGGRTRGFDPSYPWWLGFAREQDTYKSRERAKKRQQDEE
NDKFNQLLARINEQQKQIDELRGVACQEDPALDITGAPSKRKSSVAESEA
PPDDPRRMIEGCPGYPVDGIKESTSCELHQKFKNISMKVVVGQALPSGRD
ARWHGREIPAGFTKVGVDEIMTGFHDMELDIAPPKRKRSPLPKVPHANLS
IRPYDRTPEENTRIAKEHHDAQMKKKEPEPRPEYTEKHIAWAKDCITTPS
QYDLHYKPDDYTRTLQKEVKKSSSRPSASRSKSSSTTSKKKSDVPQLGQQ
AKQSIPPLKVLTENVPPPV*GQAFERAKELAAECGISVEDLLASQDDRIP
KDVVAPKP*FVMGEPLVSKDDLPTNMRYLHKWYLSESKNGRTMIVLSVPR
EYYGRSEEIHIDFDELFQMYNGDALDKSLMSCYCLMKILECKSKSILNIG
FIDPDEIHIATLTNCPKETEENLLRFLIDQNFCDHILFPYNFNFHWILLD
IQIDKGRVDAFDPLSRPLEQFQSLQDMLQGVWKRFKCVTPGNFTEKLTFR
AAQCDQQPRGTHLCGYYVCETIRTFTSEYKDHRFDVSNEHSHLYFYPSFF
VITIDIHIHLLFLYSTRP

>gnl|PTREP|PTREP30 DNA transposon, TIR, CACTA, "DTC_Donald_AF474373-1"; (TREP750) ORF2 protein
MDPHIRNLKEE*LLEDIIKDGPDVEPAESPSSYLNPDVGMEVERHGDEAD
GAGDRSNDGEGDSSTDGEAGEEIIKSGEASTSSKATKRGPTRKLDARTHY
TFEVILPTGEPKLPKNAADTFKKQCGVNVRDHVPISVREWNKRKGAADSD
YVSERYKDNLWNDLMSHFNLPECENEDAAEKLRAKVKQWNLKKMAELFRS
WKKKLWKNYLKTKKVPVFEGYLAKQANHWKAFQEYKESEDAQALLEKNKI
NADKKKYHHKLGPGGYETAIPKWDKKEQDLLDKGIVPEPLRDEWELRARN
WFLAHGGSYDEKTGDLICSDGLRIPRENWKRIVKEIKEGKRKFTADREKD
LLTLVLGNDEHGGRTRGFGPSYPWWLGFARDQDTYRSRERAKKRQQDEEN
DKFNQLLARINEQRKQIDELRGVARQEDPALDITGAPSKRKSSVAESEAP
PDDARRMIEGGPGYPVDGIKESTSCELHQKFKNISMKVAVGQALTSGPDA
RWHGREIPAGFAKVGVGEIMTGFHDMELDIAGPEDERTLGEVLGGVILWD
KNYIKLPGSAPRTTPPPSRRRSPTPPLPPSPPHDVGQHNTSPSRSPPPDL
GRPSPPPPAQDTKRKRATKNAPPTIPKRRSPPKHKRSPLPKVPHANLPIR
PYDRTPEENARIAKEHHDAQMKKKEPEPRPKYTEKQIAWAKYITTLPSQY
DLHHKPDDYTRTLQKEVKKSRSRASASGRKSSSTTSKKKSYVPQLGQQAK
QSIPPLKVLTENVPPPVQGQAFEIAKEWAAQWGVSVEDVLASQDDRLPKA
VVAPKPQFVMGEPLVSKDDLPTNMRYLHTWYLSESKNGRTMIVLSVPPEY
YGRPEEIHIDFDELFQMYNGDALDKSLMSCYCLMKILDCKSKNILNIGFI
DPDKIHIATLTDKPKETKENLLRFLTDQNFCDHILFPYNFSFHCILLDIQ
IDKGRVDAFDPLSRPLEQFQSLQDMLQGVWKRFKCVTPGNFPEKLTFRAA
QCDQQPWGTHLCGYYVCETIRTFTSEHKDHRFDVSNEHSHLYFYIAHGHE
DEGPTRATRDCCCRGACRISEDGSY

>gnl|PTREP|PTREP32 DNA transposon, TIR, CACTA, "DTC_TAT1_AF325196-1"; (TREP767) transposase
MDGYRWQGDEDDYEVVHGGRARNEEGQQDNHRGSGGREDEESPGDDHDGD
AVHSHHVEDAGHDDEEDAGTDDGHDHEDDDAGGADDAGPSMGWVQDPHIQ
ELLLKQTDNARAAAREKAKMDQLELDAVTPLYEGCRPEDTRLKVTLMALE
MKVKHKMTDACFDENMSFWHERLPKGNKCPTSLEEAKKIVCPLDLPHVKY
HVCMNNCIIYRDEHAESTICPVCGVTRYKKRKKAPRKVVWYFPITPRLQR
YFADPKVAKLLRWHADREEKKREDDANDPEIDKKDKMLSHPKDALGTLEF
GNDPRNIVLGASTDGVNPFGSQRSTHSTWPVFVWMYNLPPWLCMKRKYIH
MSMMLIEGPKQPGNDMRSFCRTLYMRILPRKNNSYSPCQQGVEHNLMTYE
AYDINGYTFYTEAKDMKSDGYQNSGVTMESYTGNDKDRYYGRIEEIWELS
YAGEKVPMFRVRWAKSVLKEDRYFTTMVIPEAKSKTAGANVTAKNEPWVL
ASQVDQCFFITDPSKPSRVVVRRGKRKIIGMDGVANEQDFDKYGDPRIEH
DDDDEVAAYTTRRSRTTLPKGRPFHRRTPFAKKKSKKIVNR

>gnl|PTREP|PTREP34 Retrotransposon, LTR, Gypsy, "RLG_Sukkula_AF427791-1"; (TREP740) polyprotein
MLSIFRMAPPTRQNPGREDMPPPPPPPPPPPPPPPAEAWQAVMAATNANT
QMLIQLLQERANQQPGNFQHGGNQFASLSQFLSNQPKTFTSCDQPFDAED
WIRDMNKHFECSNVRPEDYVKFATFQLKGQASIWWQQLKDSRGARVMSWE
EFCRDFRSHYIPSSFVEEMREKFRRLKQGGNSVYKYNVEFHELARYALQD
IPDQKSKIYQFRGGLKENLQLALALHDPEEFDKFYNLALRAEAALALPDD
SKPCQVFCDTSLQGLGAVLMQDKKVVAYTSRQLKPAEKNYHVHDLELAVV
VHALMTWRHLLLQRKVEVFTDHKSLKYIFTQPNLNLRQTRWVEMLQDFNP
SVEYTPGKANVVADALSRKAYCNSLILQPLQPGLCESFRKLNLQLVPQGF
LANLQISPTLEDQVRAAQLLDAMVKKVKIGMGKSLPKFKCFTVDARDTLF
FEDRLVVPKGDLRKVIMEEAHNSLLSIHPGSSKMYHDLKQTFWWTRMKRE
IAQFVNECDVCRRVKAEHQRPAGLLQPLLIPEWKFDHIEMNFVTGFPESK
KGNDAIFVVIDKLSKVAHFLPVKESILAAQLAELYTSRIVSLHGVPMMIS
SDRGSIFTSKFWDSFQSAMGTKIRFSTAFHPQTSGQVERVNQVLEDMLRA
CVISFGMNWEDCVPFAEFSYNNSYQASSGEAPYTD

>gnl|PTREP|PTREP35 DNA transposon, TIR, Mutator, "DTM_HORMU_AF427791-1"; (TREP731) transposase
MTLEAFVVEGGNRWVLRRVTGERAWASYMGFASNPNNSMYGQPMVYVEFI
SASDVAECSSSAGEAELAITVTPDAGPSEPRGGQQVAITVAPDAGPTEPT
GGQQVYDTGYWSAVVDMSEHVEGLPEALDDDDDGHSSASSESDDDEVVPP
ENAVAAAINPEFLQVMSITNEFHSVADLDAGSLAIGQIFPDKKSAKQAIH
SYAIAIHRQHRVKQSDKKELKLICIHREAGCRGRVIARQKPGVCQPWHVT
KIEQHGCEQTGTLSEHRNVTAEYVSQVMQTIVQQSLNISIRALRATASDL
IGFPVSYSKARHAKEKIFQRLYGTYEEAYSFAPRMLHQISLANRGTQVFR
KERPNPLNPDEQILDRLFWAFAQTIQAFKHCRPVVSIDGTFLTGKYKGTL
LVAMAADANNQLLPIAYALVESENKHSWLWFLCCLKMGVIKDREGVCIIS
DRNTGLLSALEIIKASQDPDWGWPDLETRWCMRHLAANFYSKFKNKDWFK
LFKRMCMQKTTAKMNAIWAGINGQIERASLPAREDRRGRRTAINLSQWIN
ENCLNLYKWAQPHDTDARYGIMTSNMSEVYNGVLKGVRALPITALIDETW
NRTV*YFADRVTVAKALVDLNKTWSEKMQRHLDDKANKSQRHGCRQVDAL
RNKWEVSVRAKFVKGHHRGAKKQAVTLGATSYECTCNKPKLLGYPCSHVL
RAAADQQISVEPYVSPYFNMHNLYNTWNGEFWAWDIDTNYKQLWPEGTTW
VPDPALMRTSKGRRQSRRPQ*

>gnl|PTREP|PTREP36 Retrotransposon, LTR, Copia, "RLC_HORPIA2_AF427791-1"; (TREP730) polyprotein
MKIILRSLRVWEAITDDDVDEERDEGAMAAIAQSVPDSVLMTLAEFETAR
EAWNALKEMRIGEDRVTKARAQVLKRQFHKLQMEETESVNDYAMRLTTLM
GEIRALGAKLDESEIVEKFFSSVTDKFTYIIGTLEQLYDIDDMTITEAIG
RLRTWEENARGCRKGKGGGSDQLMYSRTDWEAPSSKGRCDGGEGSSNTKG
DGQTGKGKGKGKPQGRGKAGQSKEQKPRNLDLSEVKCYNCNKMGHFAKDC
PKPNKREIKANLAKQEDEGPGLLMVEVCDLAETVVVKPSRKVLLHEEKVT
PKLSGDQNVS*YLDTGASNHMTGCKEKFLELEYDVEGSVKFGDGLAVEIC
GQGSVLFEGLTGEHRILTGVYYIPRLRNNIISIGKLDENGCKVNIESGVM
TIFDNLRNVLARVNRTRNRLYILNLDQSQPECWLAKSDDDSWLWHARFGH
VNFYALKKMSKMQMVSGMPVIDHVDRVCDGCLVGKQHCRPFPAQSTYRAS
DALELLHGDLCGPITPATHAGKKYFFLVVDDYSRYMWFVLLRSKDEAFEA
FKKLKAATEMEHKLKVRVLRTDRGGEFTSNEFNDYCEKIGIKRFLTAPYT
PQQNGVVERRNRTVVDMARSLLKSKNLPGIFWGEAVSTAVYLLNRAPTKA
VIGKTPYEAIYGRKPNVSHLRTFGCVAHVKTAEPHLSKLADRSTKMVFIG
YESSSGTKAYRFYDPQTKRLRISCDVVFEENQAWNWSAAADDAPNSNIFA
VEFPTDDDAGEDVQVIGKTPNQGDHNGSDHHGADTDDDAHRSQGDSDNAA
HDTGGDLDDNIDNEAHSDDDNQDDGHGHDDYADDTDVDDTPRSQPSSSSA
STPTQFVSPPSQATTDSSGPRRYKTLKKVYKYTKPVTLEYSGLCLFGVEE
PANFVEARKSPSWTHAMDEEMKAIESNGTWTLVTRPPNQKTIGLKWVYKL
KKDTEGAIVKYKARLVAKGYVQRQGVDYDEVFAPVARIETVRVLLALAAQ
EDWKVHHMDVKSAFLNGDLTEEVYVEQPLGYEKKGEEGKVYKLKKALYGL
KQAPRAWNSKLDRSLVSLGFKRCPLEHAVYTKNSKGSNLLVGVYVDDLII
TGDSVQEIERFKAQMKNKFSMSYLGLLSYYLGIEVKQSSGEISLCQSSYA
VKLLDKCGMSDCYATQVPMDQRHKLSKRSSNPPVDTTMYRSVVGSLRYLV
HTRPDLAYSVGIVSRFMENPTTEHMSAVNQILRYVKGTINLGCTYRKGKE
GLILRGYSDSDMAGDVDDRKSTTGMVFYLGPNPISWNSQKQKVVALSSCE
AEYIAASTTACQAVWLRRLLAILAKREVQKVSLKIDNQAAISLCKNPVHH
ERSKHIDTRFHHIRECIEEGLIEVQHVNTKDQLADIFTKSLGRQKFIEMR
RKVGVQEVKSSNKIKEVNVDVNHVAHVGLGKKAK

>gnl|PTREP|PTREP37 DNA transposon, TIR, HAT, "DTA_AF427791-1"; (TREP718) transposase
EEFLAKVTLFCNKHGIQIPTLEDNYVPHGRSPLYYEVQINDDRYRGEVYL
GILDQIIQELDNRFDKVNMKLLICMSALNPANSFASYDVLKVMKLAEFYP
*DISSIDLVRLEFQPVTFIDDMRQDVGIRSVHTICELSVMLAGTNKHVLY
DLVYMLVKLVLILPVATTSAERVFSAMNLVKNKLRNSMSDDLLNNCSVTF
IERDVFLKVSERDIVEAFMAKERRRVT

>gnl|PTREP|PTREP39 Retrotransposon, LTR, Gypsy, "RLG_BAGY2_AF427791-1"; (TREP720) polyprotein
MKKDIDHKWNLLERIKRNFEDWELEEGKESCMNFQFDCVKSFVETNTSRD
FSAKYGLDSEIVASLCESFAAHVDLPKEKWFKYHPPVESNIAKTNLVEEK
IIAFSDLVVPCAYTEKPPYPARMKDYSKTPTVIRRGYIRALAPSEEIRVE
PSVAIIKDLLAEDIDGHVIKFCEDSARIAKPHVKDKHGPVVGLPVVSVKI
GDHCYHGLCDMGGSVSAIPGSLYDEIKDEIAPAELEPIDVIITLANRDTI
CPLGIVRDVEVLCGKTKYPTDFLVLGTAQNSFCPIIFGRPFLNTVNAHID
CIKQTVTVSFEGVSHEFNFSKFGRQPHERESSGRDEIIALASIAVPPTDP
LEQYLLEHENDMHMEERDEIDRIVLEQYPILKNNLPVELLGDPPPPKGDP
VFELKQLPDTLKYAYLDEKEIDPVIISALLSKREEKKLLKTLRKHRAAIG
YTLDDLKGISPTLCQHKTKTDPDFKPVADYQRRLNPKMKEVVRILNLLLL
EAGIIYPVGHSDWVSPVHCVPKKGGITVVPNDKDELIPQRIITSYRMVID
FRKLNKATWKDHYPLSFIDQMLERLAKHTHFCFLDGYSGFSQIRVA*SDQ
EKTTFTCPFGTFAYRRMHFGLCNAPATFQRYMMAIFYDFCEKIVEVFMDD
FSV*GSSFDDCLSNLDRVLQRCEETNLVLNWEKCHFMVNEGIVLGHKISE
RGIKVDKAKVDAIEKMPCPTDIRGIRSFLGHAGFYRRFIKDFSKISRPLT
NLLQKDVPFVFDEDCEEAFEIFKKALITSPIVQPPDWNLPFEIMCDASDY
AVGVVLGERVDKKLSVIHYASKTLDSAQRNYATTENEFLAVVFACEKFRS
YIVDSKVTIHSDHAAIKYLM*KKDAKPRLIRWVILLQEFDLHVVDRKGAD
NRVADNLSRLENVLDDTLPIDESFPDEQLNVTRTSLSAPWYADYANYIVA
KYIPPSFTYQ*KKKFFFDLRHYFWDDPHLYKE*VDGVIRRCMPEHEQGQI
LQKCHSDAYGGHHAGDKTAHKVLQSGFYWPTLFKDARKFVLSCDECQRIG
NISKRQEVPMNYSLVIEPMWGFDYMGPFPSFNGYTHILVVVDYVTK*VEA
IPTKNADHHTSIKILKEVIFPRFGVPRYLMTDGGSHFIHGVFRKMLAKYD
VNHRVASPYHPQSSGQVELSNRETKLILQNTVNRSRKNWSSKLDDALWAY
RTAYKNSMGTSPYKMVYGKACHLPLELEHKAYWAIKELNFDFKLADEKRL
FDISSLDEWRAQAYENARLFKEKVKRWHDKRIQKREFNVGDYVLLYNSRL
RFFAGKLLSKWEGPYVVEEVYRSGAIKINNMEGNFPRVVNGQRIKHYI

>gnl|PTREP|PTREP3 Retrotransposon, LTR, Copia, "RLC_Usier_AF474982-1"; (TREP704) polyprotein
MGTSNQVLIRVQVVFSGGVKWVIDSGCTNHMTGDSNLLYDFMQAIRPYMS
IVFGGGSKGQVIGLGKVEITNDMSLANVMLVQSLQYHLLSVCQLASVGYD
TLFRLTDVKVFKRDTLEVAFVGELDGNLYTVDFSKESTFHTTCLMAKADM
GWLWHRRLAHVGMRNLHNLLNVNHILGLTNVSFKKDSVCSACIDGKQHQS
KHPPKNIVSTSRPLELLHVDLFGPPSWASLGGEKYGLVIVDDYSRYTWVF
FLKSKDETKITFIDFAKQV*RKFDKDIKAIRSDNGSEFKNYTLEEFLTDE
GIEHQYSVPYTPQQNGVAERKNRTLVEMARSMLDEYKSPHSFWAEAVNTA
CHASNRLFLRPILEKTPYEVLTGNKPNVKYFRVFGCKCFILNKRERLGRF
QSKTSEGIFVGYGSNSHAYRVYNKSTGCVIETCDVTFDEFNRSHGEQVDL
TDAGE*DSSQDILNMGVGTLLPMEQKPHDDDESISHPQDSSLSVPPQDTS
THIMPVVEDQVGEHVSHPDHTQEQVDLQELDQSMDMVDDEPQQVQREEEY
LPWHVNDPYVEDVDDGNEVEPHETLTSIMLRVAGRVDIDQILTGVLEGRV
TRKQLTNFCAHFSFVSSTVPHRVQDALCDNDWLLAMQEELNSFTRNEVWS
LVERPIEEHNVIGTKWIFKNKEDENGIVLRNKARLVAQGYSQVECLDFGE
TFAPVARLESIRILLAYAAFNGFTLHQMDVKSAFLNGPLQE*VYVSQPPG
FVDPHHKDHVYKLHKVLYGLKQAPRAWYDHLKKFLLDDGFVRGVIDPTLF
TKRENGDLILCQIYVDDIIFGSPNIHLCKKFAASMTKTFEMSLNTDLKFF
LGFQIQQFQEGIFLSQTKYLKGILENFDMTNAKPMKTPMATDVVLNEDTN
GIPFDPSTYRSMIGSLLYLCASRPNIMLSVGICARFQASPRESHHTAVKH
ILRYLVHTPKLGLWYPKDAKFDLIGYSDADWAGDKVGRKSTFGACQFLGR
SLVSWSSKKQNYVSLSTAEAEYIAAASCATQLLWMRQTLKDYGITYRHVP
LLCDNESAIKISENPIDHPRTKHIDIRYHFLRDHVQKGDIDIAHVGTDMQ
LTDIFTKPLCVPRFCQLRRELGTLELDNIT

>gnl|PTREP|PTREP44 Retrotransposon, LINE, unknown, "RIX_Karin_AY146588-1"; (TREP800) polyprotein
IEDRFEKKLSCWKGKLMSYGGRLILINSVLTIMPMFLLSFFEVLVGVRKR
LDFYRSRFFWQGDELKRKYRLAKWDIICRSKDQEGLGIENLEVKNRCLLS
KWLWKLSSKNDAMWAQILRSKYLRQKTLSQVTVRLTDSPFSKGLMKVKQS
LFNRMKFVIGNGTSTRLWEDTWLGDTSLAIQYPSLYRIVRRREVFVTSVF
QSIPLNIQFRRSLAGNRWEEWLRLVRRLMEVQLSQQPDELRWKLTKSGVF
TVKSMYIDVINSNSIPTSKHVWAVKVPLKIKVFMWFVHKQVILAKDNLIK
RNWTGPTRCSFCDRDETIRHLFFDFPLAKVLWRTVHIAFNINPPNSVNTL
FGTWRNGIEPDLTRHIRVGVCALVWTIWTCRNDLVFNRILGIHFLQVIFR
TTALIRSWSLLTPMEARKHLVTGSFPWEMVHPGYLSTGLDGAPCNRIGN

>gnl|PTREP|PTREP44 Retrotransposon, LINE, unknown, "RIX_Karin_AY146588-3"; (TREP802) polyprotein
AQLPHNKYLQSKTLAQVIMRPTDSPFWKGLMRTKDLFFRWVKFFVGNGMS
TRFWEDTWLRETPLAVQYPTLYNIVQRMEDYVGMVFRKIPLNIQFRRALV
AEQWTAWLHLVWRLIDVQLSDQPDLTQWTLPKNGVFMVKSFYMDLINSGP
ISRSLHIWKIKIPLRIKISMWFVHKQVILTKDTLIKRRWVGSSGCCFCDH
DETIQHLFLECPLAKLLWRTIHIAFNINPLVDVESLFGTWLAGVERNTAA
RIRIEICALLWAIWNCRNNLIFNRQQTLTYLQVIFRTTAWICTWSLLTPM
NFRKPLVTRCNQWEMVARAIFIRFGWRSHNMIGV

>gnl|PTREP|PTREP47 Retrotransposon, LTR, Gypsy, "RLG_WHAM_AY146588-1"; (TREP817) gag
MKNLRDPKTKIYPSTTRGGKELPSSSALDSPSVLSKFATPTPASAIRSDM
SHVIDDATSDMHDTYDETASMPDTTLPLSEFLDEQIARARERDIIESEYD
DDSDDENMPAIPEGYLFDMESSAAISACKDRYELKRLLIKWNKESLRDEM
RPDPAFATSPICVPDKDYEFSIDPDIITLVESDPFYGYESETVVAHLTKL
NDIAALFTNDERSRYHYILKIFPFSLKGDAKIWFNSLDSRCVRSPQDMIY
YFSPKYFPTHKKQAALRERYNFV*IKEESLPQAWGRLLKLLNALPDHPLK
KPEILDIFYNGLTDASRDYLDSCAGSLFRERAPDEAEILLNNMLTNENNC
APPEPAPEPTPTPITKPIPERTPKKSSILFLSPEDMQEAKKSMKEKGTKA
EDVKNLPPIEEIHGLIIPPIEETYDHNFFTKEPPDPDIPTQVVKVNSLYR
YDKAEVPPTKIASQCLDEFDNFMFKEDDFNAYFGTQLKENAYMIRRLGDY
MADIKGELKLVSKHVSTVSTQVEQVLKAQKEVLNEMNSKKNDYAVRVATR
TGRITQEPLYPEGHPKRIEQDSQRNNIDVPSSSKKK*KKNDRAVQTSSEP
IAEPPDNPNDISMSDAETQSGIEHEPSKNINDNVHDDAQPSNDNDVEIEP
VVDLDNPQSKNQRYDKRDFVARKHGKEREPWVQNPCLFLRNHPRKKDDED
FERFAEMIRPIFLRMRLTDVLKTNPYAKYMKDIITNKRKIPEDEISTMLA
NYTFKGGIPKKLGDPGVPTIPCSIKKNYIKTTLCDLGAGVSVMPLSLYRR
LDLNKLTPTEISLQMADQSTPIPVGICEDVPVVVANVTILTDFVILDIPE
DDSMSIILGSPFLNTAGAVIDCNKGNVTFHVNGNEQTVHFPRKQPQVHSI
SSIGKIPTIIFGGFEFPLPTVKKKYDILIIGDVHIPVEVT

>gnl|PTREP|PTREP49 Retrotransposon, LTR, Gypsy, "RLG_Wilma_AY146588-3"; (TREP821) polyprotein
MGLLERIKRNSEDWDLDNGKESGMTPSFDCVKSFMDTDIFRKFSTKYGLD
SERVGSFCESFAAYVDLSKEKWFKYHPPIEVKVVAPIKVEEKTITYNNPV
VPTSFVEKPPFPVRIKEHAKASTVVRKSNIKTYTPPEQVKVEPNLLLLKI
SCLVILMGMLFISVMKLPELLNPRDKDKPRPVVGMPLISVKIADHCYHGL
CDMGASASAIPYSLYQEVMHDIALGEMEDIDVTIKLANRDTISPMGIVRD
VEVLCGKTQYPIDFLVLGSPQDSFCPIIFCRPFLNTVNATIDCKRDVVTV
GLDDMTHEFNFSKFSRQHREEELPSKDEIICLASIAVPPTDPLEQYLLDH
ENDMFMNERRELDEVFFKHEPIMKNNLPIEILGDPPPPKGDPVFELKPLP
DTLKYAYLDEKKIYPVIISANLSEHEEERLLKTLTKHRVAIGYTLDDLKG
ISPTLCQHKINLEEDAKPVCDHQHRLNPKMKQVV*KEILNLLEAGIIYPI
ADSQWVSHVHCVPKKGGITVVPSGKDELIPQRIITGYRMVIDFRKLNKAT
KKDHYPLPFIDQMLERLSKHTHFCFLDGYSGFSQLPVSAKDQSKTTFTYP
FGTFAYRRMHFGLCNAPATFQRCMMAIFSDFCENIGEVFMDDFSVYGSSV
DDCLSNLDRVLQRCEETNLVFNWEKCHFMVNEGIVLGHNVSGRAIEVDKA
KVDAIEKMPCPKDIKCVRSFLGHASVYRRFIKDFSKISRPLTNLLQKYIP
FVFDDDCVEAFEILKKALISAPIVQPPDWNLPFEIMCDASDYAVVAVLGQ
KVDKKLNVIQYSSKTRDNAQINYATTEKEFLAVVFAYDKFRPYIVDSTVA
IHTDHAAIKYLMEKKYAKPRLIRWVLLLQEFDLYIVDRKGAENPIADKFS
RLENVLDDPLPIDDSFPDEQLNVINASHTTPWYANYIVAKFIPPSFTCQQ
KKKFFYDLRHYFWDDPHLYKVGVDGVIRYCVPKHEQE*ILRKCHSEAYGG
HHTGDRTARKVLHSDFYWPTLFKDARKFALSCDECQRIGNISRRQEMPMN
YSLVIKPFGVWGFDYMRPFPSSNGYTHILVVVDYITKWVEAIPTSSADHN
TSIKMLKEVIFPRFGVPRYLMTDGGSHFIHGAFCKMLAKYDVNHRIASPY
HPQSSGQVELSNRELKLILQKTINRSRKNWSKKLDDALWSYRTAYKNPMG
MSPYKMVYGKACHLPLELEHKAYWAIRELNYDFKLAGEKRLFDISLLDEW
RTQAYKNAKLLKEKVKRWHDKTIQKREFNVGDYVLLYNSCLRFFAGKLIS
KWEGPYVIEEVYRSSAVKINNFEGTNPKVVNGQRIKHYI

>gnl|PTREP|PTREP51 Retrotransposon, LTR, Copia, "RLC_Bianca_AF521177-1"; (TREP1161) polyprotein
MEEELCLVDSCTSNTILREIKYFQTLTKRKGNIMTIDSRDASIIGSGRAT
LVLPMGSTIAIEDALLYPQSTRTLLSFKDLRSNNFHLETISENNFEHLLL
TKSNGSEKQILEKFPSLSSGLYYSYIKPVPHVAYKIIFQDLDKFKTWHDR
LGHPGVGMMTKIIDNSIGHSLPTINFSKLSDFVCTACATGKLIIKPSYLK
VKNESLNFLERIQGDICGPIQALSGPFRYFMVLIYASTRWSHVCLLSTRN
HAFSQLIDQIIKLRANHPKNRIKTIRMDNAAEFSSRAFNDYCMAMGIHLE
HFVPYVHTQNGLAESLIKRVKLVARPLLQNCNLPASCWAHAVLHAADLIQ
IRPTAYHTTSPLQLVRSTQPSISHLRKFGCAVYVPISPPQRTSMGPHRKL
GIYVGYNSPSIIKYLEPLTGDLFTARYADSIFDEDHFQALGGESNHKECQ
EIDWNVTGIQSLDPRTKESETEVQRIIDLQHIANNLPDAFTDHKGVTKSH
IPAVNAPERVEVPTKTTQTTNESKRGRNLVSRNIASQKPPRKQRKSNPLP
VNAIQPQVEGHQPDAQHLEPSINAHKNIIAGTSGHHGSIVVGNHIESEGI
KEISINYTDSGESYNRETPIVDIYFASKIAETLQVDPEPKTVRECLKRPD
WPKWKEAIEAEVRSLNKREVFSSVIPTPHNVFPVGAKWVFVRKRNENNEV
VRYKARLVAQGFTQRPDIDYDDTYSPVMSGITFRYLISLAVQMNLSMQLM
DVVTTYLYGSLKSDIYMKVPE*LKMSNPKENRNAYCVKLQKSLYGLKQSG
RMWYNRLSEFLIQKGYSNNDDCPCVLIKKSSNGFCIISVYVDDLNIMGST
PDYRRSTQSSNGEFEMKDLGKTKFCLGLQLEHLPSGILVYQPAYIQKVLE
NFNMDKSYPTKTPMVVRSLDMNKDPFRPRDDDEEILGPEFPYLSAIGALI
YLANCTRRDIAFTVNLLVRHSVASS*RHWTGVNNILRYLHGTKDLGLFYQ
INQDMTMVXYTDXCYLSDPHNVRSQTGFVFLYGGTAFSWKSTKQTLLATS
TNHS

>gnl|PTREP|PTREP52 Retrotransposon, LTR, Copia, "RLC_HORPIA2_AF521177-1"; (TREP1162) polyprotein
MKIIL*SLRVWEAITDDDVDEERDEGAMAAIAQSVPDSVLMTLAEFETAR
EAWNALKEMRIREDRVTKARAQVLKRQFHKLQMEETESVNDYAMPLTTLV
GEIRALGAKLDETEIVQKFFSSVTDKFTYIIGTLEQLYDIDDMTITEAIR
RLPT*EENAPGCKKRKRGRMRPTHVLAHDREDPSNKVKARSVAKAQPTRK
AMDKPKKAT*KRKPQGHSKAGQSIRAETTELDSSEVNCYNCNNMAHLANN
SPKPNKREIKANLAKQEDEGPGLLMSEVCDLAETVVVKPSRKVLLHEEKV
TPKLSGDQNVSWYLDTGASNHMTGCKEKFLELEFDVEGSVKFGDGSAVEI
CGQGSVLFAGLTGEHRILTGVYYIPRLRNNIISIGKLDENGCKVNIESGV
MTIFDNLRNVLAHVNRTRNTLYILNLDQSQPEWWLAKSDDDLWLWHARFG
HVNFYALEKMSKMQMVSGMPVIDHVDRICDGCLVGKQHRRPFPAQSTYRA
SDALKLLHGDLCGPITPATHAGKKYFFLVVDDYSRYMWVILLRSKDEAFE
AFKKLKAATEMEHKLKVRALRTDRGGEFTSN*FNDYYEKIGIKRFLTAPY
TPQQNGVVERRNRTVVDMARNLLKSKNLPGTFWGEAVSTAVYLLNRAPTK
AVVGKTPYEAIYGRKPNVSHLRTFGCVAHVKTAEPHLSKLADRSTKMVFI
GYESSSGTKAYRFYDPQTKRLRISRDFVFEENQAWNWSAAADDAPNSNIF
AVEFPTDDDAGEDVQVIGKTPKPRDHNGSDHHGADTDDDAHRSQGDSDNA
AHDTGGDLDDNIDNEAHSDDDNQDDGHGHDDYADDTDVDDTPRSQPSSSS
ASTPTQFVSPPSQATTDSSGPRRYKTLKKVYKYTKPVTLEYSGLCLFGVE
ERRTSIEASKSPSWTHTMDEEMKAIESNGTWTLVTRPPNQKTIGLKWVYK
LKKDTEGAIVKYKARLVAKGYVQRQGVDYDEVFASVARIETVRVLLALAA
QEDWKVHHMDVKSAFLNGDLTGEVYVEQPLGYEKKGEEGKVYKLKKALYG
LKQAPRAWNSKLDRSLVSLGFKRCPLEHAVYTKNSKGSNLLVGVYVDDLI
ITGDSVQEIERFKAQMKNKFSMSDLGLLSYYLGIEVKQSSGEISLCQSAY
AVKLLDKCGMSDCYATQVPMDQRHKLSKRSSNPPVDTTMYRSVVGSLRYL
VHTRPDLAYSVGIVSRFMEKPTTEHMSAVNQILRYVKGTINLGCTYRKGK
EGLILRGYSDSDMAGDVDDRKSTTGMVFYLGPNSISWNSQKQKVVALSSC
EAEYIAASTAACQAVWLRRLLAILAKREVQKVSLKIDNQAAISLCKNSVH
HERSKHIDTRFHHIRECIEEGLIEVQHVNTKDQLADIFTKSLGRQKFIEM
RGKVGVQEVKSSNKIKEVNVDVNHVAHVGLGKKAK

>gnl|PTREP|PTREP55 DNA transposon, TIR, CACTA, "DTC_AJ406396-1"; (TREP11) transposase
KTNMIRHNIDVMHIEKNICDSIIGTLLNIEGKTKDTLKSRIDLTHLGIRK
DLKVQDEGKPQDMAPVVYVLDKVKRKEFCEVLSHVRFPHGFASNPERRVS
ADGNKVQGLKTHDWHVLLQRVLPVILRGLGRPNLYRAVVELGQFFRELCS
RNIRIDSLERLRDKIPTILCDLEKIYPPAFFDVMVHLAVHLPDEALLRGP
V*YGWMYRFERY

>gnl|PTREP|PTREP56 DNA transposon, TIR, HAT, "DXX_George_AF521177-1"; (TREP1169) transposase
MKRNDDIKSFFLNYEAKTRKVAAQEQHKPDIDPPPLPPLHLDSEIDIDIY
SPPVHSDLEIDIDIDDEAPRQPSPQHPNARSYNIQRLPTNPGERIPISEY
DVGDQDKVRKRYIAKNAIQPYAHNFEVKKMYGKNRHFNFVWFENYKWLEY
SVKYEATFCFVCYLFKGKSNGGPRGDTFVKGAWKNWYRSDALDKHEGGIN
SIHNKAQEKYNLFVLPQPSIDDIIVRASKEDLRMYMARLTYSLRCLRFLL
NQGLAFRGHDESEDSSNRGNFLNFLNDFSANEEEVNKVVLNNAPGNCILT
SPKIQNQIIECWCGETTKRIIEDIGYDHYAILADESSDASHKEQLALYIR
YVDKSGRGYERFLGVVHVPNTTSLSLKDAIQTLLKDHHLTPSQIRGQGYD
GANNMKGETKGLKTLVMKESPSAYYIHCFAHQLQLVLIAVAKDNEPCLWF
FDHVSYLLNVVGVSCRRHDMLRDVRAQKVLEALEMGEIESGSGLNQEMGL
SRPGDTRWVSHFKTIMHIVSICIPQFLRYLTPLDEILHTQVNGQEYMELL
KPLNSFEFFFNLHLMLVILGYTNELSKSLSKRASYFVNAMALVILAKSRM
HYMTRCHGWEDFLAKLPLFCNQHGIQVPLWQDTYEHHGRSRRYYEVQTND
DRYRREIYLGVIDQIIQELNNRFDEVNTELLICMSALNPLNSFASYDAFK
EIKLVEFYPMDISSTDLIRLEFQLGTFIYDMRQDDRFRNASNIGDLSILL
VATKKHVLYDLVHLLIKLILILPVATTSVERVFSAMNLVKNKLRTSLGDD
RLNNCLMIFIERDVFMKVSEDEIVDAFMAM*

>gnl|PTREP|PTREP57 Retrotransposon, LINE, unknown, "RIX_AY013246-1"; (TREP20) polyprotein
GTWFNFYEKISHFCFDCGRLIHVNDRCDPPVDKSLQWGEWLRASAGRNIY
VKGWGLGGAAISNNSGDSSRTGGVEQGRFHNAGVETSQLNIISFRSSHRL
VTLALGEGCRQEKAEVNNPARGKQRDGDACASDLRHGLDKKRENDLCQEL
INKQAEKIGQADRTSEHRVKEHTRIFLTLEGGRTGKEALLSVSQGRMKES
TALRKQESRKRRPKQLWVAKGDPDKQVTHDSFIRDTRHKSSNVFDRLDVH
TDISTDPVNQDRRVQMNCLAWNCRGLGLDPTVGEFRDLVWSYNPAVVFLS
ETKKKSRAMERIKWSLGFTNGIAVDCAGKSGGLALWWRDHVQVTARPWSQ
YFIDAEICVNGKTFRFAGFYGEPKTELPNNWDALRYVRAQDSLPWLCACD
FNEILTQEEQWGGNPRPFSQMENFRDCMSDCGLGTYWIHLHMGDNKRTDK
DNIQVKLDRATCNSEFMSMYPTSMVENLITEELTIDHFHSCNGDGSWHSD
EDNSDFSVLRKCELSMRGMTMVDDAWKQVGQCVGTGDLCSKLNHLSRSMH
AWGRSVFGSIRRQIDLLKDQLRDAKERALTTGCTQEVRDIESQLKKFFER
EEVMYKQRSRGLKEGDQNTQYFQNRALHRKRKNTVRAFHGENGVRCTVDE
GTQEMAAGFYEHLFNFEGTDHTDLILDLFQEVVSPAMNKKLTAVVTDLET
DCSFLMGPTKASGPDGLPAMVYQQHWLLVKEDVCKAVRDFFAGSATPESF
NDTIIVMTPKVNSSESLSEFHHINLCNVLYKIATKVLANRLKLILPVLIS
EEQSAFVPGRLITDNVLVAYECVHAIRKRKRKKPLCAVKLDMMKAYDIVG
WVFLEQTLERFGFEQAWISMIMRCVRSVRFCVKLNGFFSRSFLTSRGLRQ
GDPLSPYLFMFCVEGFSALLQRAQRDNHINGVSFGSTGPHITHLLFADDS
VVFLEGSEGNLQALKDTLQAYQVASAQKVNLQKSSILDGKGCRDEDKGTL
KQTIGIDSEALSERYSGLPTVVGRLKDGSFEYVRERSKGKVSGSKGQGLS
KKAREVLIKYGLQSTPTFTMSCFQLSKKICGNMTSIPSKFWWGASQGERK
VHWIAWDRMCLPKRDGGMGFRNYEAFNQALLAKQAWRSNSPSSLCARVLK
ARYFKECTIMNTTCPNGASYTFRSIIHGRELLREGVVWRVGDGSDINIHH
ENWIPRAGSLKPLGQVFVHGITHVSDLLSPDGTAWDHDKVETMFTPDDAY
DIKQIIIGGPGSSDHLAWNFTKSGQFSVRSAYHLCMMLKRTKFGRTESSS
SVHKHQSWLALWNTNAPGKAKIHMWCLIKNGLVVDAESHRRKIKPGIFCT
VCGGEETVLHCFWACPHSAMFWKVLSSEKWVPVAIPPVSEGPHGELASWL
LRWFAEVGDPERELMVHAVYGLWLARNEARDGKRIVDPRVVEENVYQHII
EWNAIHMKKPRSTTPTLAVRWSPPEQGWLKANSDGALAKLRDRGGGGVVL
RDHDGAYRGGACYVFRDVSDPEVVEILACRKAVHLAVQTGATRVHVEVDS
KGMAAMLNDQAKNLSAAGPIVEEIKLLGRTLQGFIVSRVRRSGNHGAHLL
AREGVSTELCRV*

>gnl|PTREP|PTREP58 Retrotransposon, LTR, Copia, "RLC_Ikeros_AY013246-1"; (TREP21) hypotehtical protein 
WSTWAPAWLKIFIWLLLKNRLWCNDRLQRRGWPNGYFCQLCHRNLESAKH
LFWQCPLSIQVWTHVASRPGCESLHPGKWGDRENSSDILGVMINSALPKY
KKAVKTMIVLILSEIWKERNACTFRDKTAELQSLKYAINSTVELWRQAGA


>gnl|PTREP|PTREP59 Retrotransposon, LTR, Copia, "RLC_Inav_AY013246-1"; (TREP22) polyprotein
MSSSSSSSTMAASLAALGHTITEKLARDNFLVWKAQVLPHVRAAGLMGYL
DGTMAEPPAVLTTETDVAGKKEISSTPNPAHVLWYTQDQQVLTFLLASLS
RDVLLQVHSLASATGVWTAIQQMFASHSRARHIQLRGQLGNTKKGDSPVA
I*FTKMKGFADEMAAAGKPLDDDELVSYILQGLDSDYNYVAALSSRPEAD
QKIGLTELFSLLNTAEARIDAQNGSNTNSFSINLASKGGSRNNNDTRPSG
PGGGNPAAYRGAGGGFFPNTLVAPPPSGGRDETCQICKRQGHATWHCFKR
YDKNFNPPPKRQGGGGGNNSGGGGNSSGGNTKSANTVPAAYDVDTNWYLD
TGAMDHVTGELEKLAMHD*YTGPEQIHIASGQGMEIKHVGHSLLPTPHKP
LHLNNILHVPKSKNLLSGSQLTKDNDAYLVVYPEFFSIHDQETGGTILHG
PSKNGLYPIAAGQPGAHGRHMLGAIKPSTSRWHRRLGHPSFPVVQQILRN
HSLPVSNKVDHHLVCDACQMAKSHQLPYSRSTSVSQAPLELIYSDVWGPG
PLSVGRQKYYVSFIDDFSKFSWIYLIKHKSDVFQKFHIFQALVERLFARK
IIAMQTDWGGGGEYQKLNQFFQKLGITHHVSCPHAHQQNGSAERKHRHIV
EVGLSLLAHASMPLKFWDETFSTAVYLINRVPSRVIHNQTPLERLFGLTP
NYTFLRIFGCAVWPNLRPFNKHKLEYRSKQCVFIGYNYLHKGYKCLDVST
GRVYVSQDVIFDEHIFPFASLHPNAGAQLRAELVLLPPTLLNLSSPLTPS
AAPNDPMAISTIYAPTSANSVQDSAGISHDFMQPNVSTDLVATENPGLHA
SESATAAPGAGDPPLQASGSAAAAPGSSPGFVHQPAASVGRSPASTSDPA
RQPDASAARPPVSDPVRPTTVATALFPASDLVRSPQEIRLQRRAPPTAPW
IGRGLPRVVGPPCLLPWTREISLDVVTRYRLLRLRPMQRRRCPMQRPPRL
LFLLVCHLIRYLLTLRCPVVSSTICNPCNQHLHPLGLILGPKVVFLNPKF
TLMVVFVGLSFCATGEPENLKEAIADPKWKAAMDEEFGALLSNNTWHLVP
PRPEQNIIDCKWVYKVKRHSDGTIDRYKARLVAKGFKQRYGIDYEDTFSP
VVKAATIRLILSIVVSRNWSMRQFDVKNTFLHGVLEEDVFMRQPPGYKSS
QSPTFVCKLDKAIYGLKQAPRAWYSRLSSKLQSLEFHPSQANTSLFFYSR
HGVTIFMLIYVDDIIVTSSSAHAVDALLKDLRMDFALKDLGTLHYFLGIE
VKPIRDGIVLSQGKYLVDLLTRMNMKGCKPVSTPLPTAEKLSLYDGEPLC
DEDSTKYISIVGALQYVTLTRPDISFSVNKVCQFLHAPTTVHWSLVKRII
RYLQGTMHHGLRISKTDSMLVSAFSDADWAGCPDDRRSTEVFVVFLGSNL
VSWIARKQPTVSRSSTEAEYKALTNATAEVIWVQTLLTELGVPHPRAASL
WCDNLGATYLSANPIFHARTKHIEVDYHFIRERVANKLLNIRFIPTGDQV
ADGFTKPLTAQQLGVFRHNLNLGSCD*GGMLDEISLCIIYVTCITLYVRV
SFCLLVFKL*

>gnl|PTREP|PTREP60 Retrotransposon, LTR, Gypsy, "RLG_Erika_AF326781-1"; (TREP234) polyprotein
MVVNLFRMAPAKSTSQNQNQDPPPPPPPPEAWQAVMAATNANTQLIMQII
QERN*SSQANQGSNQNQFATLNQFLANGPKTFSNCVEATDADDWLVDLGK
HFECSNVRPEDFVKFASFQLKDQAAEWFQQYRDSRGGRLITWDDFRRDFR
AHHIPQSVTESKREEFRNLKQGSLSVYDYNKLFQKLARFAKQDVPDEKSM
IYQFRGGLREEIQLALVLFEPLRYDEFYNMALKQEAAQLRCDASRKRVRD
TSSSSSTQVAKQQKYWLPPPPFRQPYQ*KSKGGSGSSHPPNPGLQNKTSS
QAPRSSAPYHRPLSEVTCNKCQQKGHYANKCFNQRRLPPPPPVRSASTAV
VKHNPKHAKVNMVNAAQAEDSSDVIMGNLPVNNVPAKVLFDTGASHSFLS
CPFASKHNVDTEIMPKAMQVVSPGKLLTSSLVAPDISITLGDYKFLSSPV
VLGNSDIDLILGMDWLSKHKAHLDCAARQIQLTHSSEDVIVFAARDNTIQ
LFSLNEKGELDAISQIPVVCEYQDVFPEELPGMPPNRPVEFVIELEPGTE
PVCKRPYKLGPEELKELKKQLDVQERMGLIRPSTSPWGCGVLFVKKKDGT
DRLCVDYRPLNKKTIKNKYPLANINELFEQLKGAQVFYKLDLRMGYHQIR
IREQDIPKTAFRTSYGSYEYTVMSFGLANAPPTFSRMMNFIFNPYTNDFF
LVYLDDILVFSKNKEDHAKHLRLVLDKLREHQFYAKFSKCEFWLDEVLYL
GHIISAKGISVDPEKVSAIVNWEPPQNVKQLRSFLGLASYCRRFVENFSK
IAKPLSNLLQKHVKYVWSPECDVAFNALKEKLITAPVLTPPDETKPYEVF
CDASLQGLGAVLMQEKKVVAYTSRQLKPNEKNYPTHDLELAAVVHALLT*
RHLLLGRKVDIFTDHKSLKYIFTQPNLNLRQTRWVEMIQEYNPSIEYTPG
KANVIVDALSRKAYCNSLILKPYQPELCEAFRKLNLQVVPQGFLANLQVS
PTLEDQIRQAQLLDAMVKKVKIGIAKSQSKYKCYRLDDKDTLFFEDRMVV
PKGELRKVIMNEAHNSLLSIHPGSTKMYQDLKQTYWWTRMKREIAQFVNE
CDVCRRVKAEHQRPAGLLQPLAILEWKFDHIEMDFVTGFPKSKRGNDAIF
VVIDKLTKVAHFLPIKESITVAQLAELYTSRIVSLHGIPQVISSDHGSIF
TSKFWDSFQKAMGTSIRFSTAFHPQTSGQVERVNQILEDMLRACVISFGM
K*EDCLPYAEFSYNNSFQASSGKAPFEILYGRKCRTPLNWSETGERQLLG
NDLITEAKEMCKVIRDNLKAARSCQKSYYDSKHCDLAFEIGDHVYLRVSP
MKGTRRFGIKGKLAPRYVGPFKIVSKRGDLAYQLELPATFANVHDVFHVS
QLRKCFKTPERTVNFEDIELQEDLSYREHPVAILEETERKTHNKAIKFLK
VKWSHHSDREATWEREDHLRSEYPEFFQS*

>gnl|PTREP|PTREP61 Retrotransposon, LTR, Gypsy, "RLG_Fatima_B_AF326781-1"; (TREP235) hypotehtical protein 
MAPSIINNDAVQGETFLPGQIFVFGGFALRANSLGHLEQIESYAPGHQVR
FGSLNYTADIRGDLIFDGFEPQPSAPHCLDGHDIALPPNSALEAAHTPVP
TIDSEPTAPIEDQRLDVASGAAISEAIEPNSNPALRMARDSEEPDSSPNS
EPPAPLPIESDWAPIMEFTAVDIFQHSPFGDILNSLKSLSLSGEP*PDYG
QQGWDTDDEEIQNPPTTHFVATVDDLTDMLDFDSEDIDGMDDDAGDEQEP
AHVGRWKATSSYDIYMVDTPKDGDGDGIAGDDTSKKQPKRRRQRRRSKSR
QRKNGDSGTGDNTTPDSTEEHPLQQESAQEDREASPHERVADKEVEDDNH
MPPSEDEASLDDDEFVVPEHLAEQERFKRRLMATASSLKKKQQQLRADQD
LLADRWTEVLAAEEYELERPSKSYPKHRLLPRLEEEAPTSPAHDMADRPP
RGCDREASRPSTQAMPRHRVKHTKARENAPDLRDILEDKARQTRSIYGSR
RHPTARDGDRHSGCNESSRAELNRQSSFKLRRDIAQYRGAAHPLCFTDEV
MDHKIPDGFKPINIKSYDGTTDPAVWIEDYLLHIHMARGDDLHAIKYLPL
KLKGPARDWLNSLPVDSIGSWEDLEAAFLDNFQGTYVRPPDADDLSHIIQ
QPEESARQFWTRFLTKKNQIVDCPDAKALAAFKHNIRDEWLARHLGQEKP
KSIATLTTLMTRFCAGEDSWLARSNNLTKNPGNSNTKDKSDRSRRNKQKP
RINSDSNEDTTVNARFRGYKPSQRKRPFKRNTQGPSSLDRILDRLCQIHG
NPEKPANHTNRDCQVFKQAGKLRVENKDKGLHSDDEEEPRPPNNNGQKGF
PPQVRTVNMIYATHIPKREQKRALRDVYAMEPVAPKFNPWSSCPITFDRR
DHPTSIRHGGFAALVLDPIIDGFHLTRVLMDSGTSLNLLY*DTVQKIGID
PSRIKPTKMTFKGVIPGVEANYTGSVTLEVVFGSPDNFRSEELIFDIVPF
RSGYHALLGRTAFAKFNAVPHYAYLKIKMPGPRGVITVNGNTECSLRMEE
HTAALAAEVQSSLSRQFSSSAFKKPDTIKRARSTPQQDRLACSELA*QCG
PNPSPRDIAKPVLHIHNYALEIPWAQGKGHYHGTPEIRLKPHQGLPDSFF
FFYSQDSILRTTRSAIQLPHKRCKTQESRQATPHYGTPRWSLLRAVYLFF
NTIPRPAPGQDM*

>gnl|PTREP|PTREP62 Retrotransposon, LINE, unknown, "RIX_Isabelle_AF326781-1"; (TREP238) polyprotein
MDGLPHWDFKPGQAIAEQVRRRFGSTVHFSSSNGTKEFFLVVFFSSASFP
LSVESVGIALQCCIGGSAEGFSITRLDDRKFRFSVASNRVGHFIYHLKDR
IWPDFVCHFSLYRPERHAVPKNDSSWHSDHHLADISARKPVAIKSTFSFD
SRVDAIDPSSVSELAKFDLLAQDLCTQRLSPVTGISSESSPPAGTLPRSF
KQLSFGNNVPMHIQGNAFTTNLHFGSFLEGNCPSRAGDMEVNQHLLPNTV
RIGDFQTLVPSLGNQLRNQFQGSKFRQDCWDAIPPFMLLYINDQRKFGYS
VSHIAKIWSIQSVPPSEYINKRLNICYLCNGSGHQVDSCPDQACNICSSE
PCVCSTGPPRVDPSACGLHYPGPQSCYLCGSLAHLYFHCPGLLRCHICSF
LGHTTHSCHPLARRLHWKPKFGSIFLDTRMGNPCNSGLHKEGNIRDAYHL
EKGKEIMANPITAVSLRHQINQPSINDIVPVRNATDSPVPTAVRCSSKGR
SQTRSSSRRQGGRQPKLVWVPKGTRARADTHSALLLCSNSTTAPELHHLR
MANFPVIVIPYLLQSMTIELGPEDRKVRDDMVISPTPPLRHDFLAIAEVN
RFVPFHHKAALRHTIEGLLHESQFFPTKIDDHPLGVGIFGFVDSVTRDAA
VGTTFKLDEDEGNIHTVISFVPHDAALNMRQTTYGPQIWLLYIGFPQDYQ
TSHYMHKSVDKFGELVTWNNPRGDRKLVLLKVRVIHLPCSKSFVMHQLGG
ERLCWTVCVTMLRSSDWNAHLPEIPPAGIDPLPANGIPHPLHGDGLTAEQ
LYQAQLNNWMAQNAQMNANAANNANGDNQGNEVHFQANWGQWPPSPPPAL
YNYQAWLAQEGLQVQDGIVPNNNLLDSPDRESSDMAASSAPLYPMDTPAA
QLNSLEVVVSLTQNGLQFAMTEQGNVISSMLINQGFSFIRLNSFLRSTIM
PLVLGALVLDSGMIACRLKLVITVENDLVTVTTTKQTREFSSSSLQIEEI
RDTPDLNTLVSPANVALDTLVVHQSTDFAPLGVSVPTQHVQSEPLLLTDH
VAQVESSADAIMEPEHSLVDVSPVETLPISANVTPEVYYAGILAEPGHSS
ATTLGGTGPDSAETIRKGKMALPMSSVSLRRSTRSNKYDGFKVPSITDSN
PKSSKVKPRINPSALQSVARSEDAGSTAAPPPTPIATIQLVGTVKCDIPA
AELSKEVLNEVMRMLFPHYLALKLSSFIHGTFGNWNVLCWNVRGLNSEPK
QLALFNAITASGCAVICLQETKKQSFDNNFIKSCCPRRFDKFEFVPARGA
SGGIATIWNNSFFSATVLASRDFALVIRFQSTQSAQDWTRVNVYGPCQGV
ERSEFIQ*LLDLNIPHNEDWLLLGDFNFIRALDNRNKPGGNFGDMITFND
FIRSQNLVELPIKGRAYTWSNMQVDPLLEQIDWFFTSTNWTTSYPKTLVK
PLGRPVSDHIPCVVCIETTIPRSKIFRFESYWVHHTGFMDTVTHSWSKPI
RSTNMATVISRNFKHLRYDLKRWSKGISKLSIAIENSNMALFELDELENK
RRLTTPESNFRRILKNHILRLLNYQREYWRKRCTIRWVKFGDEQPNFFQA
MASERYRRNNIASLNTDDGYCVEDHAGKESVIFQAFKKRLGTSGRHEMKF
DLARIIKKVEDLDQLTVPFTHQEIDDVIKFMHADRAPGPDGFTGHFLKSC
WHVIKEDFYKLCNQIHEGNLNLESINEGFITLVPKINAPTSVNDYRPITL
LNCCLKIITKLLTNRLQKIILKIVHRNQYGFLKGRSIQECLAWAFEYIYQ
CQTSKKPIVLLKLDFAKAFDMIEHEAMLEIMQHMGFNDKWLHWIKAILTS
GKSSVLLNGLPGRQFHCKSGVRQGDPLSPLFFVLAADLLQAVINDAFAQG
LIQLPFACATQKEYPVIQYADDTIMVLPACETQAATIKQILSDYATSIGL
KINFQKSTLIPINCDDSLSNNIAQIFGCMTGKMPFTYLGLPLGSTRPSVQ
DLMPLVCKMERRLTATLNMISYGAKLSLLNSMITSLVIFALCTLKLPITI
IELIDKIRRKCLWTKKTEQGESCNSLAAWSMICKPKDCGGLGILDLRTQS
DALLLKYLHKFYNHWDLPWVELIWNTYYTTKIPHATDACVSFWWRDITKL
MPIYRGITKVTIQDGRNTLLWKDLWMDSILASSYPRAFSFTRNEDISVQA
LLTAPTLGETFQLPLSEQAHAELMDLQQLLTPITLAHEEDRWTCIWAKGD
YTASQYYSYYFRELKAHQTYKWLWKSKVTMKIEVFGWLLLSDRLNIRNML
KRRHYNIGDNHTCLLCDSPIEETLEHLFFTCPFSQECWSHLHIRWTTHGT
RLQWIEQAKITWNRPMFMDIFLQAAWSIWKERNNKHF*

>gnl|PTREP|PTREP63 Retrotransposon, LTR, Gypsy, "RLG_Cereba_AY040832-1"; (TREP98) polyprotein
MPGSHDEEIDWENLTNQELYDKFQQMMSQQVQGFLTTFGEAMEKLDGMEQ
KFDTKMNAKFNEVLARLPPPAIASVPLQPQQRRRPGRVPLGHVQPFIGLD
PPTVAAGAGAAAAAAAAAAAEVSPAEQHDDYDDDYDGDYDAEGEHAPVQH
GEQQPPPRQAAGRPHGYNRNGRDAPHPQVRDHDHLPKVKLNIPSFDGRYV
PDLYLTWELETEQRFTCLQFPEDRRVAAAVCSFTSFACXWWSEYCRIHHA
NIPATWAALKTAMRTRWVPPYYQRDLLQNLQRLRQGKKSVEEYYQELQTG
MIRCGIVEDNEAMLARFMGGLNRDIQTILEYKDYXTITRLFHLACKAERE
VQDRQALARTNFSAGRTSSWTPRTTSTSTRPPASAPPVSAASSTRDTRKQ
APAPSFAKSTPSGPAQSSSSSTASTGQTHEVICRRCKGGGHYARECPSKR
VMIITEDGGYDSASDYDEETLALIASEERGVADTAQETQYMAADYADRYE
SLVAQRVLSVQVTQVEQNQRHNLFHTKGVVKERSVRVIIDGGSCNNLASM
EMVEKLSLTTRPHPHPYYIQWFNNSGKVKVTRTVRVHFSIATYSDFVDCD
VVPMQACSVLLGRPWQFDKNSVHHGRTNQYTLVHKDQNITLLPMSPEHIM
KDDIARASKAKQDLHKSENQIVAKEFEQHNKPNKSSSSVASEIKLKSGCL
LATKSDITDLDITTSVCYAFVCKEVLFSFEDMPSSLPPAVINILQEFADV
FPQDVPPGLPPIRGIEHQIDLIPGASLPNRAPYRTNPEETKEIMRQVQEL
LDKGYIRESLSPCAVPIILVPKKDGTSRMCVDCRGINNITIRXRHPIPRL
DDMLDELSGSIIFSKVDLRSGYHQIRMKLGDEWKTAFKTKFGLYEWLVMP
FGLTNAPSTFMRLMNEVLRAFIGRFVVVYFDDILIYSRSLEDHLDHLRAV
FTALRDARLFGNLGKCTFCTDRVSFLGYVVTPQGIEVDKAKIEAIESWPQ
PKTVTQVRSFLGXAGFYRRFVRDFSTIAAPLNELTKKDVPYSWGTAQEEA
FTVLKDKLTHAPLLQLPDFNKTFELECDASGIGLGGVLLQDGKPVAYFSE
KLSGPSLNYSTYDKELYALVRTLETWQHYLWPKEFVIHSDHESLKHIKSQ
AKLNRRHAKWVEFIETFPYVIKHKKGKDNVIADALSRRYTMLSQLDFKIF
GLETIKDQYVHDADFKDVLENCREGRTWNKFIINNGFVFRANKLCIPASS
IRLLLLQEAHGGGLMGHFGVKKMEDVLATHFFWPRMRRDVERFVARCTTC
QKAKSRLNPHGLYMPLPVPSVPWEDISMDFVLGLPRTKKGRDSIFVVVDR
FSKMAHFIPCHKSDDAANVADLFFREIIRLHGVPNTIVSDRDAKFLSHFW
RCLWAKLGTKLLFSTTCHPQTDGQTEVVNRSLSTMLRAVLKNNIKLWEEC
LPHIEFAYNRSLHSTTKMCPFEIVYGFLPRAPIDLLPIPSSEKVNFDAKE
RAELILKMHELTKENIERMNARYKLAGDKGRKHVVFAPGDLVWLHLRKDR
FPDLRKSKLMPRAGGPFKVLEKINDNAYRLELPADFGVSPTFNIADLKPY
LGEEDELPSRTTSVQEGEDDEDINTIATPTAPAAIHTGPVTRARARQLNY
QVLSFIGNTSNVHEHMMLPKLDTFVVLMNEGPSMDKKDIRWSGMKHGKQG
ARAGENNGASLGDFRTLKPP

>gnl|PTREP|PTREP64 Retrotransposon, LTR, Gypsy, "RLG_Cereba_AY040832-2"; (TREP99) polyprotein
MPGSHDEEIDWENLTNQELYDKFQQMMSQQVQGFLTTFEEAMEKLDGMEQ
KFDTKMNAKFNEVLARLPPPAIASVPLQPQQRRRPGRVPLGHVQPFIGLE
PPTAAAGAGAGTAAAAAEVSTAEQHDDYDDDYDGDYDAEGEHAPVQHGEQ
QPPPRQAAGRPHGYNRNGRDAPHPQVRDHDHLPKVKLNIPSFDGRYVPDL
YLTWELETEQRFTCLQFPEDRRVAAAVCSFTSFACIWWSEYCRIHHANIP
ATWAALKTAMRTRWVPPYYQRDLLQNLQRLRQGKKSVEEYYQELQTGMIR
CGIVEDNEAMLARFMGGLNRDIQTILEYKDYNTITRLFHLACKAEREVQD
RQALARTNFSAGRTSSWTPRTTSTSTRPPASAPPVSAANSTRDTRKQAPA
PSFAKSTPSGPAQSSSSSTASTGQTHEVICRRCKGGGHYARECPSKRVMI
ITEDGGYDSASDYDEETLALIASEERGVXDTAQETQYMAADYADRYESLV
AQRVLSVQVTQVEQNQRHNLFHTKGVVKERSVRVIIDGGSCNNLASMEMV
EKLSLTTRPHPHPYYIQWFNNSGKVKVTRTVRVHFSIATYSDFVDCDVVP
MQACSVLLGRPWQFDKNSVHHGRTNQYTLVHKDQNITLLPMSPEHIMKDD
IARASKAKQDLHKSENQIVAKEFEQHNKPNKSSSSVASEIKLKSGCLLAT
KSDITDLDITTSVCYAFVCKEVLFSFEDMPSSLPPAVINILQEFADVFPQ
DVPPGLPPIRGIEHQIDLIPGASLPNRAPYRTNPEETKEIMRQVQELLDK
GYIRESLSPCAVPIILVPKKDGTSRMCVDCRGINNITIRYRHPIPRLDDM
LDELSGSIIFSKVDLRSGYHQIRMKLGDEWKTAFKTKFGLYEWLVMPFGL
TNAPSTFMRLMNEVLRAFIGRFVVVYFDDILIYSRSLEDHLDHLRAVFTA
LRDARLFGNLGKCTFCTDRVSFLGYVVTPQGIEVDKAKIEAIESWPQPKT
VTQVRSFLGLAGFYRRFVRDFSTIAAPLNELTKKDVPYSWGTAQEEAFTV
LKDKLTHAPLLQLPDFNKTFELECDASGIGLGGVLLQDGKPVAYFSEKLS
GPSLNYSTYDKELYALVRTLETWQHYLWPKEFVIHSDHESLKHIKSQAKL
NRRHAKWVEFIETFPYVIKDKKGKDNVIADALSRRYTMLSQLDFKIFGLE
TIKDQYVHDADFKDVLENCREGRTWNKFIINNGFVFRANKLCIPASSIRL
LLLQEAHGGGLMGHFGVKKMEDVLATHFFWPRMRRDVERFVARCTTCQKA
KSRLNPHGLYMPLPVPSVPWEDISMDFVLGLPRTKKGRDSIFVVVDRFSK
MAHFIPCHKSDDAANVADLFFREIIRLHGVPNTIVSDRDAKFLSHFWRCL
WAKLGTKLLFSTTCHPQTDGQTEVVNRSLSTMLRAVLKTNLKLWEECLPH
IEFAYNRSLHSTTKMCPFEIVYGFLPRAPIDLLPIPSSEKVNFDAKERAE
LILKMHELTKENIERMNARYKLAGDKGRKHVVFAPGDLVWLHLRKDRFPD
LRKSKLMPRAGGPFKVLEKINDNAYRLELPXDFGVSPTFNIADLKPYLGE
EDELPSRTTSVQEGEDDEDINTIATPTAPAAIHTGPVTRARARQLNYQVL
SFIGNTSNVHEHMMLPKLDTFVVLMNEGPSMDKKDIRWSGMKHGKQGARA
GENNGASLGDFRTLKPP

>gnl|PTREP|PTREP65 Retrotransposon, LTR, Copia, "RLC_Barbara_AF326781-1"; (TREP228) polyprotein
MLYFPLPIYSFHACLNYDDCLTCPKLAKICQELKLGKG*VFIWSSSLITP
PLDILSILQVVSELWSPFALISIAFGGHSLGSQPRRVWRLAREIITVEVP
YFDGTNFASWKHKMKMHILGHNPAIWAIVCVGLQGDFFDGREPNREATAD
ELKMLQYNAQACDILFNGLCPEEFNKISRLENAKGIWDTLIDMHEGTDSV
KESKLDVLQSQLDKFKMKDGEGVAEMYSRLPLITNEIAGLGSEEMTDKFI
IKKILRALDGKYDTVCTLIQMMPNYKDLKPTEVIGRIVAHEMSLKDKEEL
HNKSSGAYKASCEAPTSSSEKQDFNEELSLMVKNFNKFYKSRSKDRYSKS
RSYNDKRSSSREQNCYNCGRPGHYSNECGLPTREEKILQTEEGKDRHQER
EGVEMIVMKRRYSRRSKDSEREEKSSRSYTRRRNQAQVGEWVSGSDSNNH
SERSYYSDSKDTQDEGVAGLALVSTNSYDIFDSPNEGIGRCFMDKGPKVT
HPEYVDFNSDEDDLLGDDLLGDHSSDEYYDEMSIKHANQDKTNDNDKEKI
EALTKELNTLKLAHETIFEDHRELLRAHEKLRFEKLNLEQEHEFLKAIND
DLRKKSSSYIAKRLLLSTYMPQVKSSNKKDSSSSSNNDHAKSNIVASSSS
LDSTNDSLSQVTLEQENSLLKGIIEKGVYKSLARSKQFGEIVRKQGMHRK
NQGVGFE*

>gnl|PTREP|PTREP66 Retrotransposon, LTR, Copia, "RLC_Barbara_AF326781-1"; (TREP228) polyprotein
ESSMPMELSGNKINSPRQSLSLNKKSILLSRGHKLKMIFYHKTTSKKART
SFKRRLMHLKKLQRPVKWIPKTTSSSTSSSTTTTPRIPIKMMWIQKKKN*
RVLEGDSANILHSYHFGKNKCNQLPYLALVQGVTNPLVGKTRDKVT*KFS
WTSSLCVSLYVYGYPCLFLVGLTHVGIESTIHSNGDSSKRSTSTLSIHIF
NIYMKSSSTKPKVSSSLLGGITSRGSFTLRLELKQL*RCEQTNALCKSGN
PT*A*TMSMTMIKCSHLTPKSIYSYIDDLVIANCLIDARIGCACLATYFI
SAILLCEHAGCIIYSFEDIHLLF*LFGFIFLCQVDGQECLRTSSSYLCFP
RLKLYSCCITKFDQVRFEPLCVRSARSPRFVIDLNFQNLFMILGLTDTPL
SVLPRSLS*SRFSISVQPI*TFRSHRVSVTACSYESRCHRVVPLGHTDRV
GLYIVTGKILEISPNPFARAIACSALEVSGSSSRRQQPPVAGLRRRQREF
CPSIAAVASPAELGYGLDLCAIPQSDS*HIVIILILATIETLLSSQNAHR
IRFDLKILGLGFRRNYLGPTELKNSVPPIWYAIAQVRLGLTENYLSV*PI
FELGETLAVSVPPNCDSVLPSSLV*VPKLLRYHRV*KSVDIQDDFSGKLK
LSFWIILLQKSLHFVMLIFSISSIIYSQGQQSVCSMSDQSDSQNMSEQQV
VMSEGTSPSSSSDEGSRSTPSNLPKAATRQRKKRTSDSEDEDYMAEEEAT
SKRVEPAQGTKPGLKIKRPAGRQPMSKARMSTEKLIEPVAAEGKKRKERV
KKTVA*VLGKASIMEEEEEEEAAAPAPKAPKLMGDAIKSGGAASKAKTAP
KPKPKRNTRNIPAAEKNKAPVPETVAEEEEENVLRKLKPKIPDHNDAHPV
AEDMKLRRDSGLRKWREADPYASRRRTTVDYRFHTKEQ*DFYETVLLDKK
PIVCDMRWVDWTYIKENEEHYPGVQDSFIACGVADFVGQKLTKWNEELIM
QFYSTAHFYPDGRITWMSEGTRYQSTVAEWAQIINAPEEQDDDLDIYAKK
KMDHNSMSNMCKEIPNEALDTFKFGSVHYLLSGLPTINWILRHTLLPKSG
DHKMIIGHAINLLNVFDVPQKFKVMSLIVETIKRTAADQKRSYGYAPQIQ
ELINSKMGTGIYLLDKEHLPIHLDFEDNQVVMTENEPSSAQAFAKKEKAR
KEKAAKMPTQEEASEYFLKTKQEQLGYLIASTLRIEQSLATLTQNQQSLE
RIMEQKFYDLDVKVTEV*SAVEQLQEDMQERRGRTTTHAFSRVPRGPRSS
AVPVADTRATTSAPATASAPASTSAPTLASTSASTEAFVLGVMQTPPPPE
DQA*

>gnl|PTREP|PTREP67 Retrotransposon, LTR, Gypsy, "RLG_Daniela_AF326781-1"; (TREP231) hypotehtical protein 1
IFIIFIDMPPKKKASEAAAPSAPNPPSPEQTAGGVDAGGRTGADEGAHGA
ARSKDKAALLIGGAVGSHNDRAHSKTSASVHAPHPSQEARDQQRHGTHST
IRLLDQDRAGGFRSAQDQHACQRAGASGAWSPGRDTAPSNMVRRPSISRS
SHRSPLPPATSAEALARAQLLLDYPPAADKIDDWRATIQSLIGFANGDNP
RQPSASQPRQVSQARTGGDKTGGGATTVHSPPRRPGSPTRRIHHDSDSTA
SSDPRARRDQRQVLHERQQEDARTRIEHRREARRQSDQRAGPSVDMHVPG
EPGDLPYAGGCPAFTRELRQVQWPNKKNFKPDVPEKYDGKSHPSEFLSIY
TIAVQAAGGRDDKILANYFLLVLKPNVRSWLMHLPDNSISSWADLCHQFV
GAFTGGHKPHGQESDLHLLAQKEGEPLRKYIQRFSRVQHNIPDVHPAAVI
SAFHHNVRNRRMREEMAMCKIKDISELYALADKCARAEEGRKLPGETAGA
GGSDSEDAAPAKKNRRRNNRKKKGKDVLVVE

>gnl|PTREP|PTREP68 Retrotransposon, LTR, Gypsy, "RLG_Daniela_AF326781-1"; (TREP231) hypotehtical protein 2
MEDVETSEQEFQKATEVLCVDGGACLHTSHRQLKQWVREVNAAEPPLESR
KLLKWSSTPIIFDIEDHPDRTTAVGCLPMLVSPTIRNLKVTKMLVDGGAG
LNLISSAVLQKLQIPDSELEETGTFQGINPGRSKPKGKVTLPVTFGSELN
FRTERVTFDVADFPLPYNGILGRPALAKFMAASHYAYNMLKMPGPISVIS
VPGDKKDALICADKIYREAAAATDRKSLAAEAPGGKKKTKSDKSSDAHSG
KRTSSECCATVEDAPSSSIGKCKKAMAAPPETKKVSAKEDDTGGTFTISA
TLDPKIGKRAHFFLRANVDVFAWQPSDIPGVPRKVIEHHLAVCPHARPVK
QKVRKQAVERQEFIAEEIKKLEAAGLVRGVLHPTWLANPVVVRKANGKWR
LCIGFTDVNKACPKDPFPLPRIDQIVDSMAGCDLLSFLDAYSGYHQIFMA
EEDEEKTAFITPCGTYCFIRMPFSLKNAGSTFARVVHVALEPQMHKNVET
YMDDIVVKSKDRATLIQDLDETFANLRKINLKLNPEKCVFGVPFGKLLGF
FVSQRGIEANPDKIKAIEQIEAPKRVKDVRRLAGCVAALSRFISRSAERA
LPFFNFEKAGPMKWTPEAEAALQDLKKYQSSTPTLVAPKPQEKLLLYIAA
TNQVVSDALVAEREADDEPATAASASSNKQGASPTSSGPDKDGSAQVREE
IQKRMVQRPVYFVSSLLQGARSRYFGVQKLLFGLLMASRKLRHYFQAHEI
TVVTRFPLKRILQNPEATGRIVEWALELSSFGLKFESTSTIQSRALAEFV
AEWTPTPDEEIPETSIPVKEASKERLMYFDGAFSLQGAGAGVLLVSPTGE
HLKYVVQMHFPKEQATNNTTEYEGLLAGLRIVADHGIKKLIVRGDSQLVV
RQVNKNYQSPLMEAYVDEVRKLEEHFNGLQMEHVPRAQNDIADGLSKCAA
LKLPVEPGIFVLKLTRPSVTPSTVQSKKRKLISGDYFPAELPEAAAKKVP
KIDAKSAKEQSAPASPRVCSVKADAPDKFCSGKLAGERQAPAEPQALAVE
AGVPAAADTPLVLVVEPQAPAWAQQIVHFLQTGELPEEQEEAERVDRQSS
MYQFVDSTLYRRRLNGVKLKCIPREDGQKLLAEIHGGICGHHIGVRALAG
KAFRQGFFWPTALQDATAQVTKCEACQFHSKQIHRPAQALQTIPLSWPFS
VWGLDILGPFPQAVGGFEYLYVAIDKFTKWPEVEPVRKVTAQSAVKFFRS
IVCRFGMPNRIITNNGTQFTSRTFMQYVQDLGAKVCFASVAHPRSNGQAE
RANAEVLRGIKTRTFDRLHKCGRNWIEELPVVLWSIRTTPNRATGQTPFA
LVYGAEAVLPMELVYGSPRVLAYDELEQEQLRQDDALLLEEDRLQAAVRA
ARYQQALRRYHSRKVNARSLEEGDLVLRRIQSAKNSNKLTPKWEGPYRVK
RVTRPGALRLETEDGIPVSNSWNIEHLRKFYP

>gnl|PTREP|PTREP69 Retrotransposon, LTR, Gypsy, "RLG_Daniela_AF326781-1"; (TREP231) hypotehtical protein 3
QRQEKKKTGGLVYAITLNPLDPAHLVHNGCDKGLERLQIGIRRQGPEDVG
EVEAQVAERHLHQHLLKSSRTDLARLIGHLLWDPFPESPEGRRHAFEERG
ELGAGLEVLVGGIPEILHSQLRQLLVDVCGNIHKTLHPVLHVLSESALGG
SGTHQQRLASLDLLLQGHLLLLGAVQCLGQSDQVRLKICIGILGSVKLLA
LLGEAGLQLRMAVVVLLPLNLEHGKLVTARLEIGLQLRHLRLQLLLGGLG
SVFCLFEGSAKRSLARDKLLLMAVKMDLPLHQLAFLHRQLLSGKPLLLFG
FGLLEEEGLPLLGKSRPLHCQRLESFLIVAPELLRALLDVDSRLRDKCLT
GFQLGLSGAV

>gnl|PTREP|PTREP70 Retrotransposon, LINE, unknown, "RIX_Yvonne_AY146588-1"; (TREP824) polyprotein
AHNAININIKA*RKMDVSAVFLEKLHRKVSATSLHVVVGGDFNLLCFTEE
KINDHINFARMQMFNDYIADLGLREVDRVGARFTWTNRQASPTQSILDRV
LVSPKWDLHCPLASLRAITWIGSDHVPLLLSSADERPSIPPRFRFETFWL
SQTGFVAWWPRVGWRRVPTHTPVPPSTIDVWQLCAKWGRQFMKGWGANLG
RDLRERKKALLTTIQGLDLRADVVGFSPGEWLSQYDLEDQLSVIYTE*EA
YWHLRGTQKWVLQGDANTTYFQSTANGRRRRNTIPLL*DGGTLLQPPRDI
RAHVDGFYRALFLPAPRSGLSLALNCWTGNKLVSAVENVALTALFSEGEV
WTAISSKNPSSAPGLDGLPVKLFQSF*NVIKPEIMGIFNEFYVDSIDLGC
LNCGIISLIPKVSGASDIRQFRPITVINVIFQILAKGYANRVTRLANHIT
HPN*TAFIQGRYILDGVLVLHEVLHEVRSKHLRAVFLKIDFHKAYDTISW
PFLREVLLRKGFDERWITRVMQMVSCSRTAVNINGEIGPYFPTLCGVRQC
DPFSPFLFNMVVDALAAILDKDKAA*HIHGIAPHLAGGSGISLLQYADDT
IIMVEGLETDILNLKFLLLYFQQMSGLKINFDKSDVMVMGCSHEECLSLA
NRLNCRLGSFPATYLGTPISDSRLTVADLCPSVAKLHTHIEPWQGRWLSK
AAQTILINSSLSSLLLFLMSFYSLHETLHHEIAKAQSRFYWAGDNNKQKY
HMVSWHDICKPLDQAGLGIMCSKRMNIALLSRWLWRISQVQGDL*LDIIQ
AKYLRGQPLAFCQRSGGSQFWQSLIQLLPVLHIGTSISVGSGSATLFWFD
RWAGDSPFAARFPDLFSIAVDPTISVKRALIDSGCLAFRRSFGPPESSDW
RELLDSIVLHEPALDSGPDEVRWRLEPSGQFSTKSLYQAIAPSFAPPPSR
RFGPSGLKIWIFMWQWICGRIPSRVGVMQNGRIMEVRKHNGPGTGICPLR
DVPEDSNHIFFTCMSAQFLWSCFREVVGGNWYHTNFADLFAELQISPLPS
RHIRWLEIWTLAWTHWTIRNKLVIQRIPLRWATDALFKLSGYLQLWRQLS
HPSDRDAITAFIADLRSMAVRLSPPAPPPPPEPD*

>gnl|PTREP|PTREP71 DNA transposon, TIR, CACTA, "DTC_Balduin_AY146588-2"; (TREP797) transposase
MVSVGRERAEAPSLSARGVRSSIPHAPLRRALLDSMATPSGPSSSTAVPS
RGQGKKKRGGGARGRGRGGTVTLTVPSSPLPPAVSPEHVTLGVDSSEEEA
ARTPVHEPPVHGSLAHEPRVDGPSAHETWAHETPEEHMSGWGTWSGQPEE
PSGHADDGGEPTDEEGEEGGNVYQRGATWLPSLPVTREQRWSIFPDWGEV
SAFNLFVPSAFMFLQITDVLALSCCRGWDHHESVRRPNSVLGVLIRQNFP
GFVTLPGEGWLPEVGLTWEHYLAAPAPPGEIIVGVLCKTRADVVIRKGVR
RDTRRWRIMLSTRSASAYFRTYGMRFGCRLFETTTPGMVSRSPSRRCADR
MDCWEVLVNAWCSKEWLATHKEAKDKRAQMEGVPHYQGSSNLFQYGRNWA
DKVPEVYNLYAMAHTGPSKKVKAFSVSDLDDPKNFTNISAHDKLMQYRDQ
GKARKGEDFNLSQGPIDTELLMISGGGRSHGSIAMGDGLIRCPSTLPEIK
ARQSSSAPKIRPRERPVQLAFKVSYTYSSIFLHYIVCASINDYKWSCEWC
CRLLYRVREIERRNFWRRRRRGSGSWRRRRQRCWSRGGHGMACRQGPCTS
SLW*

>gnl|PTREP|PTREP72 DNA transposon, TIR, CACTA, "DTC_Donald_AF474373-2"; (TREP751) ORF2 protein
MDPHIRNLEEKELLEDIIKDGPDVEPAESPSSYLNPGVGMEVERHEDEAD
GAGDRSNDGEGDSSTDGEAGGEIIKSGEASTSSKATKRGLTRKLDARTHY
IFEVILPTGEPKLPKDAADTFNKQCGVLVRDHVPISVREWNKRKGAADSD
YVAERYKDNLWNDLMSHFNLAECENEDAADKLRAKVKQWTLQKMAELFRS
WKKKLWKNYMKTKKVPVFEGYLAKQANHWKAFQEYKESEDVEALSEKNKI
NADKKKYHHKLGPGGYETAIPKWDKKEQDLLDKGIVPEPLRDEWELRARN
WFIAHGGSYDEKTGDLICSDGLRIPRENWKRIVKEIKEGKRKFTADREKD
FLTLVLGNDEHGGRTRGFGPSYPWWLGFARDQDTYRSRERAKKQQQDEEN
DKFNQLLARINEQQKQIDELRGVTRQEDPALDITGAPPKRKSRVGESEAP
PDDARRMIEGGPGYPVDGIKESTSCELHQKFKNISMKVTVGQALPSGPDA
RWHGREIPAGFAKVGVDEIMTGFHDMELDIAGPEYERRLGEVLGGVIL*D
KNYIKLPGSAPKTTPPPSRRRSPTPPLPPSPPHDVGQHKTSPSRSPPPDL
GRPSPPPPAPDTKRKRASKNAPPTIFKRRSPPKRKRSPLPKVPHANLPIT
PYDRTPEENARIAKEHHDAQMKKKEPEPRPEYTEKKIAFAKYFTTLPSQY
DLHHKPDDYTRTLQKEVKKSRSRASASGSKSSSTTSKKKSDVPQLGQQAK
QSIPPIKVLTENVPPPVQGQAFEIAKEWAAECGVSVEDLLASQDDRIPKA
VVAPKPQFVMGEPLVNKDDLPTNMRYLHQWYLSESKNGRTMIVLSVPREY
YGRPEEIHIDFDELFQMYNGDALDKSLMSCYCLMKILDCKSKNILNIGFI
DPDKIHIATLTDKPKETEENLLSFLID*NFYDHILFPYNFTFHWILLDIQ
IDKRRVDAFDPLSRPLKQFQSLQDMLQGVWKRFKCVTPGNFPEKLTFRAA
QCDQQPRGTHLCGYYVCETIRTFTSEHKDHRFDVSNEHSHLYFYPSFFVI
MIDIHIHLLFLYSTRP

>gnl|PTREP|PTREP74 Retrotransposon, LTR, Copia, "RLC_Angela_609E6-3"; (TREP1222) polyprotein
MARAVVPLNFNAFLEKAKLKDDGSNYTDWVRNLRIILIAAQKNYVLEAPL
GARPAAGATPDVMNVWQSKADDYSIVQCAMLYGLESGLQRRFERHGAYEM
FQELKLIFQANARIERYEVSNKFYSCKMEENSSVSEHILKMSGYNNHLIQ
MGVNLPDDCVIDRILQSLPPSYKSFMMNYNMQGMNKTIPELFAMLKAAEV
EIKKEHQVLMVNKTTSFKKKGKGKKKGNFKKNGKQVAAQEKKPKSGPKPE
TECFYCKQTGHWKRNCPKYLADKKDGKVNKGICDIHVIDVYLTNARSSTW
VFDTGSVANICNSKQGLRIKRRLAKDEVTMRVGNGSNVDVIAVGTLPLHL
PSGLVLDLNNCYLVPALSMNIISGSCLMRDGYSFKSKNNGCSIYMSNIFY
GHAPLKSGLFLLNLDSSDTHIHNVEAKRCRVDNDSATYLWHCRLGHIGVK
RMKKLHTDGLLEPLDYESLGTCEPCLMGKMTKTPFSGTMERATDLLEIIH
TDVCGPMNVEARGGYRYFLTFTDDLSRYGYIYLMKHKSETFEKFKEFQSE
VENHRNKKIKFLRSDRGGEYLSYEFGAHLKNCGIVSQLTPHGTPQRNGVS
ERRNRTLLDMVRFMMSLTDLPLSFWGYALETAAFTLNRAPSKSVETTPYE
LWFGKKPKLSFLKVWGCDAYVKKLQPDKLEPKSEKCVFIGYPKETIGYTF
YHRSEGKTFVAKFGNFLEKEFLSKEVSGRKVELDEVTVPAPLLESSTSQK
TVSATPTPISEEVNNHDHETSEQDTTKPRRSTRVRSAPEWYGNPVLEVML
LDHDEPTNYEEAMVSPDSAKWLEAMKSEMGSMYENKVWTLVDLPDDRQAI
ENKWIFKKKTDADGNVTVYKARLVAKGFRQVQGVDYDETFSPVAMLKSVR
IMLAIAAFYDYEIWQMDVKTAFLNGFLEEELYMMQPEGFVDLKGANKVCK
LQRSIYGLVQASRSWNKRFDSVINAFGFIQTLGEACIYKKVSGSSVAFLI
LYVDDILLIGNDIEFLDSIKGYLNKSFSMKDLGEAAYILGIKIYRDRSRR
LIGLSQSTYLDKILKKFKMDQAKKGFLPVLQGVKLSQTQCPTTAEDREKM
KDVPYASAIGSIMYAMLCTRPDVCLAISLAGRCQSNPGVDHWTAVKNIQK
YLKRTKDMFLIYGGDKELTVKGYVDASFDTDPDDSKSQTGYVFTLNGGAV
SWCSSKQSVIAGSTCEAEYIAASEAANEGVWMKEFISDLGVIPSASGPMK
IFCDNTGAIALAKESRFHKRTKHIKRRFNSIRDLV*VGDTEICKIHTDLN
VADPLTKPLPRAKHDQHQGSMGGRIITV

>gnl|PTREP|PTREP75 Retrotransposon, LTR, Gypsy, "RLG_Danae_231A16-1"; (TREP1226) polyprotein
MAPKKKTTVAVGPSKAGHPVPTQASSRPVAERTWGAVREHQHCPSSRSLG
GGDVRAPGNGPHAANSKEGARPSAGGAGPSKIAATPPEGDARASKTPTPG
PPLKRHATNGVITPKTPGVTAGRAPSATPGRSETSPPAEALVKMACDHGV
VIELLLTWSEVEARRDPCRFRCHQHQQKPWCARSCSSIFLPLRGNSMNGE
PLSEALSRWPTKTNRVRWSPGGRCSDGVPRTSGRKAGGAATTVHSPPPRP
VPWTPARRDVMGDKISIALSDPWTHCDQRQVLREREHEDARTTIERRRGA
RHQSDRGAGPVVNHPASESPGGLPYEVGCPAFTRELRQFQWPTHRTFKPD
VGEKYSGKTHPSEFLSIYTIAMQAAGACDDKVLANYFPLALKPNAMSWLM
HLPVDSISSWSDLCHEFVGAFTRGHQAHGQASDLHVIP*KGGESLRKYIQ
RFIRIQYNIPDVHPAAIISAFHQNVRNRKMREELAMNKVKDVAELYVLAD
RCSRAEEGRKYPSEDTGVEADSSDEDTAAPAKKGRRRNRKRKGKAVLAVE
GSGDTGSTKKTKADDPGKEIAGCVACRALAVAEKPGHSNKRYCKIHCTKG
HALQDCRQVELLAEKQRAGYERRDKEKGQDGAEGSNKKRDGQAGRRGKDK
QQERPARGRDKKPEDDDHEEDDESGDQEFQKATKAMCVDGGASLHTSHRH
LKQWAREIRAADPSFDAQRPLKWSSTPIIFDTGDHPDRTTAVGCLPLLVS
PTIRDLKVTKMLVDGGAGLNLISPVVVEKLQIPDGDLEEMGTFQGVNPGR
SQPKGKVMLHVTFGSDLNYRTERIVFDVAKIPLPYNGILGRPAVAKFMAA
SHYAYNTLKMPGPVMIITIPSDKKDALISADQLYQQAVAAAAATRALAPA
AGTLGGKKKKKTGETSDTHSSKRTSSECSAPVKDVPESSTGGNKKLRAIP
PRTKKVFVNEDGTGGAFTISSTLDNK*EDALVTFLRANVDVFAWKVSNIP
GVPREVIEHHLAVCPHARPVKQKVRKQALERQEFITEEIRKLEAAGLVRG
VLHPTWLANPVMVRKANGKWRLCIDYTYINKACPKDPFPLPRIDQIVDST
TGCDLLSFLDAYSGYHQIFMTREDEEKTAFITPCGMYCFIQMPFRLKSAG
STFARAVQIGFEPQLHRNMEAYMDDIVVKTKDRATLIPDLQETFANLRKI
NLKLNPEKCVFGVPSGKLLGFFVSQRGIEANPDKIKAIEQIEAPKRNKDV
RRLAGCVAAMGRFISKSAERALPFFKILKKAGPMEWMPEAEAALQDLKKY
LSSAPILVAPRPQEPLLLYLAATNQVVSVALVA*REVDDEVMAATEPDTD
NVETTQPVEVPPKKKMMQHPVYFVSSLLQGARSRYSSVQKLLFGLLMASR
KLCHYFQAHEITVVTRLPLQRILHNPDAMGRIVEWALELSSFGLKFESTS
TIQSRVLAEFIAEWTATPDEEAQETALPGKEASCSWIMYFDRAFSLHGAG
AGVLLVAPTGEHLKYVIQMHFPREVSTNNTAKYEGLLAGLRIATDLRIKK
LIVRGDSQLVVKQVNKDYQSPLMKAYVDEVRKLEERFDGI*AEYVPRAEN
DIANYLSKRAALKLPVEPGTFVLQLTQPSIDPSTEKNKRRKLGHGKYFPD
ELPGAAGKDVAKDTEPATGRLAPAERQALAVETAAPIAEELPLVLAVEPQ
APAWAQHTVRFLQTGELPEEREEAEKVARRSTMY*FVDDVLYRKRPNSVK
LKCIPREEGLELFAEIHEGICGSHIGSRALAGKAFRQGFFWPTALQDATT
LVTKCEACQFHSKKLHQPAQALQTIPLSWPFLVWGLDILGPFPRAVGGFE
YLYVAIDKFTKWPEVEAVRKVTAQSVVKFFKGLMCRFGVPNRVITDNGTQ
FIGRTFMQYIQDLGSKVCFASVAHPRSNGQAERTNAEVLRGLRTKTFDRL
HKSGRRWIDELPTVLWSIRTTPNRATGQTPFPLVYGAEAVLPTELIYGSP
RVLAYDDLEQEQLRQDDAMLLEEDRLRAAVKAERYQQALCRYQSRKVHAR
SLGEGDLVLRRVQSAKNSNKLTPKWEGPYRVIRVTRPGAVRLETEDAIPV
SNSWNIEHLRKFYP

>gnl|PTREP|PTREP76 Retrotransposon, LTR, Gypsy, "RLG_Erika_231A16-2"; (TREP1228) polyprotein
MVVNLFRMAPAKSTSQNQNQDPPPPPPPPEAWQAVMAATNANT*LIMQII
QERNQSSQANQGNNQNHFATLNQFLANGPKTFSNCVEATDADDWLVDLGK
HFECSNVRPEDFVKFASFQLKDQAAEWFQQYRDSRGGRLITWDDFRRDFR
AHHIPQSVTESKREEFCNLKQGSLSVYDYNKLFQKLACFAKQDVPDEKSM
IYQFRGGLREEIQLALVLFEPLRYDEFYNMALKQEAAQLRCDASRKRVRD
TTPSSSTQVAKQQNYWLPPPPFHQSYQQKSKGGSGSSHPPNPGFQNKTSS
QASRSSAPYHRPLSEVTCNKCQQKGHYANKCFNKRRLPPPPPVRSASTAV
VKHNPKSAKVNWLNAAQAEDSPDVIMGNLPVNDIPARVLFDTGASLSFLS
KPFASMHEVHTIDLPKPIAVSSPSLFMNTKMMAPDVTITLGDYKFLSSPM
VLGNSDIDLILGMDWLSKHKAHLDCAARQIQLTHSSEDVIVFAARDNTIR
LFSLNEKGELDAISQIPVVCEYQDVFPEELPVMPPNRPVEFVIELEPGTE
PVCKRPYKLGPEELKELKKQLDVQERMGLIRPSTSPWGCGVLFVKKKDGT
DRLCVDYRPLNKKTIKNKYPLPNINELFEQLKGAQVFSKLDLRMGYHQIR
IREQDIPKTAFRTSYGSYEYTVMSFGLANAPPMFSRMMNFIFNPYTNDFV
LVYLDDILVFSKNKEDHAKHLRLVLDKLREHQFYAKFSKCEFWLDEVLYL
SHIISAKGISVDPEKVYAIVNWEPPQNVKQLRSFLGLASYCRRFIENFSK
IAKPLSNLLQKHVKYVWSPECDAAFNALKEKLITAPVLTPPDEAKPYEVF
CDASLQGLGVVLMQEKKVVAYTSRQLKPNEKNYPTHDLELAAVVHALLTW
RHLLLGRKVDIFTDHKSLKYIFTQPNLNLRQTRWVEMIQEYNPSIEYTPG
KANVIADALSRKAYCNSLILKPYQPELCEAFRKLNLQVVPQGFLANLQVS
PTLEDQIRQAQLLDAMVKKVKIGIAKSQSKYKCYRLDDKDTLFFEDRIVV
PKGELRKVIMNEAHNSLLSIHPVSTKMYQDLKQTYWWTRMKCEIAQFVNE
CDVCRRVKAEHQRPAGLLQPLAIPEWKFDHIEMDFVTGFPKSKHGNDAIF
IVIDKLTKVAHFLPIKESITVAQLAELYTSRIVSLHSIPQVISSDRGSIF
TSKFWDSFQKAMGTSIRFSTAFHPQTSGQVERVNQILEDMLRACVISFGM
KWEDCLPYAEFSYNNSFQASSGKAPFEILYGRKCRTPLNWSETGERQLLG
NDLITEAEKMCKVIRDNLKAAQSRQKSYYDSKHRDLAFEIGDHVYLRVSP
MKGTRYFGIKGKLAPRYVGPFKIVSKRGDLAYQLELPANFANVHDVFHVS
QLCKCFKTPERTVNFEDIELQEDLSYREHPVAILEETERKTRNKSIKFLK
VKWSHHSDREATWEREDHLCSEYPEFFQS

>gnl|PTREP|PTREP77 Retrotransposon, LTR, Gypsy, "RLG_Fatima_231A16-1"; (TREP3183) polyprotein
MPHPVFKDGTVVKGALAVGQTLRLGGFLMTACLASAPMMTSRAIENNLHV
SSVLTERLDPMELSSINELLDRVAALGVATDYDQIGPKPDLREINSPQVT
HHVAVVEGQCGDPSSILRTSYVRIPDPSKPNTHGGEDITQDLNLESGDGL
DSLDNIQESKFSSLEIPRPLSLRWGEASDLIPPTHPNISDLSQIRQEPEE
IVHH*WARFLLVMNRIKDCHEEDAISFFCNNCTDKGIVNAISRRDITRFT
DLASIVRKYCAMESAWKTEIKFWDNPALNANPVRNKRVHHHQILGSNTEK
QKPSTGHGTVLEGWLNGPCKIHSTEDTTPTHSLRACWILRQVAKIGEDLL
IPEATESHPRDTNTVLTVFETFASNNMRKRILRSLAEIYQVATINPWSDM
AITFNASDEPKFRTTRVPAALVLSPIVDGFRLTKVLMDGGNGLNLIYEET
LQKMEIDWNRIERSSTTFRGIIPNREARCTGKITLDVVFGTPNNYMSEEV
TFHVAPFSSGYHALLGREAFTIFQAIPHYGYMKLKMPGPNGIITLASDPD
IALRAENKIATLALEALSEALAGEELTVLRSTVNRDDVVLDKRSKSTSFK
PTDEIVKF*VHPTDPNKTASIGAHLNPDVDAALREFL*ENWDIFAWHPSD
MPGIPRRLAEHSLNILK*FKPVKKALWHFSEPKRQAMGEELAKLLEARFI
KDINHPDWLANLVMVPKKDKSWRLCVDFKDLNKAYPKDPFPLPRIDQIID
ATAGHDLLCFLDAYSGYHQIKMAESYQAATAFITPYGPFCFNTMPFGLKN
AGATYQRMIQTWLANQIGKIVEAYEDDVVIKTRHVKSLVDDLRLTFDNLR
TYDIKLNPEKCIFGVPAGKLLGFIVSGRGIEANPAKIRDLSQLDIPKDLK
QIQKLTGCVAALSRFISRLGEKALRLYRLLRRTEHFEWTNAATTGLDEIK
AILATNPVLAAPNIGEPMLLYIGATH*VVSAVLVVERETDGLKFTLQKPV
YYVSTILTPCKSWYPHYQKIAYAVFMASRKL*HYFQECSITVASEVPLND
IINNRDATGRIAKRAIELLPFNITYKPR*AIKSQVLSDFVAEWTEAELPK
EYVTYSNWIMHFDGSKMLAGLGAGVVLTSPTGYTVQYVLQIMYTDSNNAA
EYEALLHGLRMAVSMGIQRLEVRGDSNLAISQINGDFDAKDPKMAAYRNA
VLKMAARFKGLEFHHVARENNQAADVLARIGAKRDVVPPNIFLERLFKPS
VVWEGEPNNNSPDPTALPDTEHSDTIGGSANEITPSAHVIMAVIALWTEP
FLAYFTRQELPEDQNEARCIVWRSKAYKVHEGELYKKSTTGVLQRCISEE
EGRNLLAEIHAGLGGHHAAARSLVSKAFRIGFYWLMARADAQDLVQRCTG
CQLFANQSHMPPTALQTIPITWPFAVWGLDMVGPLKGGTHKQKYLLVMVD
KFTKWIEAKPIKMAESEPMIDFISGVVHRYGVPHSIITDNGTNFTADEGK
LWCKNMGIKLDYAFVYHPQTNGQVEHANGLIMSGIKPRLVRSLKESNAHW
VEELDSVLWGLRTTPNRTTGYTPFFMVYNAEAVLPCDIIHDSPRVCMYEE
REAELDRQDSLDALEEERDVAKTRSAFYQQQARRYQSREVWAKNYNVGEL
VLRLPDKKKDKLKPKWEGPFIIDQVLTGGAYRLRDASDNRLEPNPWNAAR
LRRFYA

>gnl|PTREP|PTREP78 Retrotransposon, LTR, Gypsy, "RLG_Fatima_B_609E6-1"; (TREP1231) polyprotein
MAPSIIDSDAV*GETFLPGQIFVFGGFTLRANSLGHLEQIESYAPGHQVR
FGSLNYTDDIRGDLIFDRFESLPCASRGHNEYDLALPSDNIQEIAPAAAP
TLNLEPVAPSTDGWMDPATEALSSSAIEPDIDLTLHESRVVKLLDPSPAT
GSEPPTPVPSESDWVPIMEFTSEDIFQHSPSGDILNSLRSLSLSGGSWPN
YDRQDWDADDKEIHGPPTTHLVATVDDLTDMLDFDSEDIDGMDDDAGDKE
EPLPTGHWTATSSYDIYMVDTPKEGNGDETAEDDPSKKQPKRRRQRRRSK
SRQSKSGDTGTGDNNTPDSAEDNNNPLQQDLKQEDVGASPLERAADGGVE
DDNYMPPSVDEASLSDDEFAVPEDPVEQERFKRRLMAMANSLKKKQQPLQ
PDQDLLADRWTEVLAAEEYKLERPSKSYPKCRLLPRLEEEAYDAADRPPH
GRDREAFQPKTQPAPPHHSNKKAWGNTPDLRDVLEDKAKHGRSIYGSRGR
ATMRDDKRHAGYSKSKSGWAEHSKQDPFELRRDIAQYRGAAHPLCFTDEV
MDHQIPEGFKPVNIESYDDTTDPAVWIEDFLLHIHMAHGDDLHAIKCLPL
KLKGPARHWLTSLPAESISCWEDPVAAFLDNFQGTYVRPPDADDLSHIIE
QPEESARQFWTRFLTKKNQIVDCPDAEALAAFKHNIRDEWLARHLGQEKP
KSMAALTTFMTRFCAGEDSWLARSNNISKNYGTLDTKDGYGRSRRNKHKR
RINSDNTEDTTVNAGFKGSKPGQRKKPFKRSTPGPSSLDRILDCLCQIHD
TPDKPTNHTNRDCWVFKQAGKLIAENKDKGPHSDDEEEPRQLNTGGQKRF
PPTSADGEHDIRNPHPQ

>gnl|PTREP|PTREP79 Retrotransposon, LTR, Gypsy, "RLG_Laura_719C13-1"; (TREP1238) polyprotein
MTWCQSMTLSSCTHQSLTIPSTPDADDWLRSITHKLRSANVAEADKVTYA
AYHLEGPASHWWENFEAMRPVGQITTWAEFSEAFREHHIPEGLMDRKREE
FCNFTQGRLTVDAYSREFGNLASYAPEEVSTDAKKQARFHKGLSPKLRRD
LRLHECTSF*KLVNKAISAETSQTDYDASRKHSRDFGSSSGSGAQKRRVW
IPSTALPPRFTPRPSFEAPRPSQQSAPPKHYGGPAANAAPRPNVVTCFKC
GEPGHYSRECPQNNNPNQAGKSVGHGKPAGKTFYAKPATTARGHVNYVSA
EEAHEDPNVVLGTLLVNCHLASVLFDIGASHSFISENYARLHNTTFCDMP
TSMVIQTPGSKWKTSRVSHGNEILVDRLVFLASLIALKSFDINIILGMDW
MSSHYAKIDYATRTVQLTHPSGKTVNVLTRVAKRQLYSLNANPLPDLEDV
PVVRDFPDVFPEELRGVPPDKDVEFVIDLVPGTVPISRRPYKMAPLELAE
LKNQLDESLNKGFIRPSSSPWACPVLFVKKKDGTDRMVVDYRPVNLVTIK
NKYPLPKINDLHDQLAGSSVFSKMDLRLGYHQIKIRNGDIPKTAFVTRYG
QYEYTVMSFGLTNAPATFSRLMNSVFMEYLDKFVVVYLDDILIYSKNEEE
HAEHLRLVLMKLREHRLYAKFSKCEFWLPEVTYLGHVISGKGIAVNPERV
RAVLDWTPPETVKQVRSFLGLASYCRRFIKNFSKVAKPLTDLLKKDKRFE
WTP*CEFSFQELKRRLTSAPVLVPPDFSKDFIIYCDASRQGLGCIVMQDR
QVIAYASRQLHPHEENYPTHDLELAAVVHALKT*RHYLLDNRCEIFTDHQ
SSKYIFTQPDLNLRQRRWVELISDYDLGITYTPGKANVMADALSRKSYCN
NLMLQQSQPLLHEEFRKLNLHIVPRGFLSTLVAEPTLTDQVIKAQKVDPG
ISRIKRNIKKGVVNCFSIDDQGVVYFGNRLVVPKARNLRRPVLKEAHESP
LTIHPGSTKMYQDLCQRFWWTRVKREIAQYIANCDVCRRVKAEHQRPAGT
L*ALAIPEWKWDKISMDFITGFPRTKRGNNAIFVVIDCLSKVAHFLPVRE
SITASQLADLYISRIASLHGVPLEINSHRGSLFTSRFWESFQNAMGAHLS
FSTAFHPQSSGQVERVNQILEDMLRASVISFGMSWEKRLPFAEFAYNNSY
QASLGKAPFEVLYGRKCRMPLNWSETGERQLFGPDMIQEAEEQARVIREK
LKTAQSRQKSQYDRKHKPMTFEVDEKAYLRVTPLKGTHRFGIKGKLAPRY
IGPFRILAKRGEVAYQLEQPPHLSRVHDVFHVSQLRRCFADPIRGVDHET
LDLQDNLSY*EYPVRILDQAERTTRRHSIKFLKVQWSHHSEEEATWERED
RLRLEYPTFFPEDPKSQDEILLSGGELSQPS

>gnl|PTREP|PTREP80 DNA transposon, TIR, CACTA, "DTC_TAT1_231A16-1"; (TREP1241) hypotehtical protein 
MAHRRQSAPVNFFLLFGKKHSGCAISKLPPTPPIPLPPFLPTRPNRTPPP
PQPYAAATPARPLRPLHPLRPLPPPPQPPPPRPSAPSVPCRRRAPPPPPS
PAAAAPLRPLRPLHPLPPPPRPPRPRAPTTAAPPRRRPHAPAPPPLQLPR
AVSHVCLSNATTGRPFISTLELWPLNGSLYRTDAEARAFLPLAARINFDA
PSPDPIRSASSFFFPISFFFFFFC

>gnl|PTREP|PTREP81 Retrotransposon, LTR, Gypsy, "RLG_WHAM_231A16-1"; (TREP1243) polyprotein
MKNLRDPKTKIYPSTTRGGKELPSSSALDSPSVMSKFATPTPTPASAIRS
DMSHVIDDATSTMHDTYDETTFMPDTTMPLSDFLDKQLARAREIENIESD
DTDESDDEESLVIPKGYVFDQDASLAILACQNRTELKRLLAKWSKQSLSA
RMKPDPAFATSPICVTDKDYEFSVDPDIITLVESDPFHGYESKTVVAHLT
KLNDIDTLFTKDERTRYFYILKIFPFSLKGDAKIWFNSLDPGCVRSPQDM
IYYFSAKYFPARNKQAALRDIYNFVQIEEESLSQAWERLLQLLNGLPDHP
LKKEILDIFYNGLTDASRDYPDSCAGFVFRERTSDEAEILLNSMLTNENN
WTPPEAIPDPIPKPTPKKRGILFLSPEDMQEVKKSMKEKGIKVEDVKNLP
PIEEIHGLNLPPIEEAYNLNPSPIEETRGLDNPTQVVKVNSVYRYDKAKI
PFTKFASPCLDEFDKYMAKKEDFNAYFGRQLKYNSNMLEHLGDYMANVKG
ELKLISKHASMATTQVEQVLKAQNDLLNELNSKDNDNAVRVATRTGRMTQ
EPLYPEGHPKRIEQDSQRNNIDAPSSSKKKKKKNDKTLHASSDPIVETPE
NPYDISIFDAETQSGNEPETSDNTNDNVHNDAQPSNDNDIEIEPAVDLDN
TQSKNQCYDKKDVVARKHHKEREPWVQKPMPFPPKPSKKKDDEDFERFAE
MIRPIFLRMRLTDMLKTNPYAKCMKDIITNKRKIPEAEISTMLSNYTFKG
GIPNKLGDPGVPTIPCSIKRNYVKTALCDLGAGVSVMPLSLYRRLDLKKL
TPTQISLQMADKSTTIPIGICEDVPVVVANITILTDFVILDIPEDDSMSI
ILGRSFLNTAGAVIDCTKGNVTFHVNGNEHTVHFPRKQPQVHSINSIGKI
PSIIFGGFEFPLPTVKKKYEILIIGDVHIPVEVT

>gnl|PTREP|PTREP82 Retrotransposon, LTR, Gypsy, "RLG_Romani_AY188331-1"; (TREP1242) polyprotein
MPPRRDPAFAFPPELTQLIQQQNTLMQLLVQNQGNNNNNNNPPPPPPVDN
LARFLRLNPPVFSSSTEPIVAGDWLRKIGRELTTVGCTDADKVRFAAHQL
DGPTASWWENYTATFPVANVTWDQFQQAFRTTHVSAGAMSMKKREFRNLL
QGNHTVARHVDEFSKLALYAPNDVATDAAKQEKFIEGLNDELSMQLMVAT
FANYQELVDRALMIEGKQQQIENRKRKYG*GKYNSGAQQKPRFTPNSGGH
THHNHGGHSHNGGSLHKHNDPKNGNGNGGNNSQSRSNPATPSKKDLSHVT
CFKCGKTGHYANDCSELKNGNENGSSGKKPNPFTRGQVNHVNVEEVEEQP
DAVIGKFLINSFTSIVLFDTGASHSYISRGFVDKFKLPTVALKTPMLVSS
PGAEYMARRGCFQFPLTIGRHVFPSDLIILESQGLDVILGMDWLSMYGGN
IDCASKSILLTTPEGKRIKYVSRHAPRRTQVNSLSRFV*EEVPVVKDYPD
VLPE*LPGMPPDRDIEFLIELLPGTGPISKRPYRMPANDLEEIKKQIKEL
LEKGYIQPSSSPWGALVLLIEKKYGSLRMVVDYRALNEVTIKNKYPLSMI
NDFFDQLRGAKVFSKIDLRSGYH*LKIREQDIPKTALTTRYGLYEYSVMS
FGFTNAPAYFMSMMNKVFMEFLDKFVVVFIDDILVYLKNKEEHKEHLRLV
LEKLREHPYAKFSKCEFWLKEVGFLGHVISGEGIAVDPSKVQSVTEWLAP
TSVGEIRYFLGLAGYYRRFIENFSKIVKPMTELLKKDTKFKWTEECEANF
QELKKRLIIAPVLILPDIRKDFQVYCDASRQGLGGVLMQDGRVISHASLQ
LRPHELNYATHDLELATVVHALKTWRQFSYW

>gnl|PTREP|PTREP83 DNA transposon, TIR, CACTA, "DTC_Balduin_AY146588-1"; (TREP773) hypotehtical protein 
MVGAGRERGLRSSIPDAPLRRALLDSMATPPGPSSSTMVPSRGRGRKRGG
GARGRGRGGRVTATVPSSPPPPTISPEHVTARVDSSEEEATRTPVHKPPV
HWSSAHESSAHVTPEKHTSGWGTWPDQPQEAEWPCDDGGEPTDL*EKGGT
VYQRGATRLPSVPVTREHRWLIFPDGERYVSAFNIFVPCAFTFFQITNAL
ALSCCRGWDHHHSVRRPNSVLGVLCRQNFPGFVTLPGEGRLPELGLSWEH
YVAAPAPPNEIIDGVMCDTRADMVIRRRDTRRTRHMLSRTSASAYSRTYG
TRLGCRLFETTTPCVVSRRPSRRWCADRMDCWEVLVDEWCSQRWLALHKE
AKDKRAQMEGVPHHQGSSNLYQFGRNWADKVPEVYDLYAMAHTASFKKVK
AFSQSDLDDANNFTNISSHNKLVRYRDEGKARKGEDFNPSQGPIDPELLM
ISGGGRSHGSIAIGDGLIRCPSTLPEIKARQSSSAPEIRPRERPVQLAIK
VSDTY

>gnl|PTREP|PTREP84 Retrotransposon, LTR, Copia, "RLC_Ale_AF459088-1"; (TREP1307) polyprotein
MAGSSVVALNLGAPPTEKLTKGNFLLWKAQVMPALQGTQVTGLLDGSDAA
PPRTVEVAQADKTTVIEPNPLYGPWLAKHQQVLSYLLNSLTPEIRAQVIG
KESTHDLWIALTTLFAAQSQSRITNLRIAISNTKKGNMSSNSFIAKMKSL
GDELAAVGRPVTDGEMVDYILAGLHRDYDPIVAAVGAIKNSITVDDLFSQ
ISAFDQRMEMLGDGPSSYRSSANAIYRGRGQYRNRGSRGRGNRGRSRGNR
APSSSSRGGGGGNYQQRQQQPPQQQQQQQHEGDYQECQICYKFHPGCARA
CWHWYDDDHEEKKKANLVTNSYGIDTNWYADSGATEHIMGELDKLTMRER
YHGGDQIHTASGSGMEISHIGNSIVKTPKKNLHLNNVLHVPQASKTLVSV
HRFTLDNQVLIIFYPYSFVVKDLATRRVILRGKCEGGLYPLISSVSSSWS
NKQAWNVTKPSSAKWHHRLGHPSSTIVQHVLSRNNLPYESSVESVCDACQ
QAKSHQLPYPISTSVSTAPLQLIFSDVWGPTPTSVGRFSYYVSFIDDYSK
FTWIYLLKKRSDVFQVFTNFQNLVARQLNSKILAMQTDWGGEYEKLNSFF
QKIGISHHVSCPHAHQQNGSAERKHCHVVEVGLALLAHASMPLKFWDEAF
LTATYLINIRPSKVIKFENPITHLFGITPDYTSLRIFACACWPNPRPYNT
RKLAFRSKNVSL*DTVPCTKWLSVLTSLLVGVYISRDVIFDESVFPFESL
HPNAGALLLKEILLLPDFDQGGDNNCANQIDENTPASTPAVMPV*IPEEN
LVQNDQNHENQALFHVNGEEEAGAVHDDDPVARATPVRLIALDLPRGSAS
DRSPNSSSGQTD*GTATGQSAGRARATHMQTTTGPTERGQSAGSTRAECM
QPMGVSARMRPTATAGSSADRNFAAQDIFISGYVTPMTTGSSASTQSAHV
EGSSGSSVDGQIVPSSVQQQQQQLATTSRVMTRLQKGIRNPKIRKDGTIP
YGMLCISGEPAKLSDALGDPKWKKAMDEEYGALMKNKTWHLVPSQRGKNT
IDCKWVYKIKRKADGSIDRYKARLVAKGFKQRYGIDYEDTFSPVVKAATI
RLVLAIAVSRGWSLRQLDVQNAFLHGVLEEEVFMRQPPGYENQQAPHYVC
KLDKALYGLKQSPRAWFSRLSLQLKRLGFVASKANTSLFIYSKANTVMFL
LIYVDDIIVASSSQNATDALLHDLSSEFALKDLGDLHFFLGIEVKKVQDG
IMLSQEKYATELLTRMGMKDCKPSPTPLSSSEQLSAHEGEPLKEEESTKY
RSIVGALQYLTLTRPDISFVVNKVCQYLHAPTSTHWSAVKRIVRYIKHTM
SLGLQFRRSSSSLVSAFSDADWTGCVDDRKSTGGFAVFFGPNLISWSTRK
QAIVSRSSTEAEYKSLANATAEIIWVESLLDELGIKHRRVPCLWCDNLGA
TYLSANPVFHGRTKYIEIDFHFVRERVAEKKLDIRFIPSKDQIADGFTKA
LPVKLFEEYKRNLNIG

>gnl|PTREP|PTREP85 Retrotransposon, LTR, Gypsy, "RLG_Jeli_AF459088-2"; (TREP1309) polyprotein
MIFADVESKSRLKVINREVNMVALATPSYLKWSQTAITFDQSDHPTHIAT
LGRQALVVDPVVEGTRLTKVLMDGGSGLNILYAETLKGMGIPMSRLSTSN
MSFHGVIPGKKAESLGQIALDVVFGDSKNYRKEKLTFEVVDFQSAYHAIL
GRPAYARFMARPCYVYLKLKMPGPKGVITVTGNRKKAEECFQKGSKIADA
QMAVVELKEYQKTADPSELLRAKKHASESAFQSAGETKTVHIHPTDPDAA
STHISTMLDSK*EEALIQLLCENWDIFAWKPSDMPGVPRGLAEHRLRVDP
KFKPVKEHLRRSAVQKKQAIGEEVARLLAAEFIREIYHSEWLANVVMVPK
KDKSLRMCIDFKHINRACSKDHFPLPCIEQIVDSTAGCERLSFLDAYSGY
HQIRLYGPDEIKTAFITPFGCFCYVTMPFGLKNAGATFMRMIQKCLLTQI
SRNVEAYMDDIVVKSRKGSDLRADLAETFANLRRYDIKLNPSKCTFGVPG
GKLLGFLVSERGIDANPEKIGTILRMKRPVRVHDVQKLTGCLAALSRFIS
RLGEKALPLYRLMKKSDKFEWTPEADAAFAELKALLSTQPVLAAPISKEP
LLLHIAATGQVVSIVLTVEREEEGKAFKVQRLVYYVSEVLTPSKQRYPHY
QKLVYGIYMTTKKVAHYFSDHSITVVSDAPLSEILHNRDATGRVAKWAIE
LLPLDIKFKAKKAIKSQAMADFIAEWIEQQLPTQVHSEHWTMFFDGSKML
NGSGAGVVLVSPRGDKLRYVLQIHFDSFNNEAEYEALLYGLRMAISLGVR
RLMVYGDSDMVVNQVMKEWDVRSPAMTGYCNAVRKLEKKFEGLELHHIPR
LKNQAADDLAKIGSKREAIPSNVFLEHIHSPSVQEDPFTEEAPQPKSATD
PTEVEVPAVVDLIMEVLAITPDWTIPYIAYILRKELPEDEEEA*QIVRRS
KAFTVIKRQLYRESATGVGQKCITPEEGQIILNDIHSGTCGHHASSRTIV
AKAYRAGFYWPRANEMAKEIADKCGGCQFYSNMSHKPASALKTIPLIWPF
AVWGLDMVGPLRTGRSGFTHVLVAVDKFTKWIEAKPIKNLDACTAISFVR
GLTFRYGVLHSIITDNGSNIDSDKFRAFCASQGTRVDYASVAHPQSNGQA
ERANGLILKGLKPRLMRDLKHVAGAWVDELPSVLWGLRTTPNRSTGRTPF
FLVYGAEAVLPSDLLHNAPRVELYTEDEEEQARQDAVDLLEEEREMAMIR
STIYQQDLRRFHARNVKSRPFQEGDLVLRVDQQKPHKLAPTWEGPFVVTR
VLHNGAYHLYNVDRQIDEPRAWKAELLRPFYTRVLP

>gnl|PTREP|PTREP86 Retrotransposon, LTR, Copia, "RLC_TAR1_AF459088-2"; (TREP1317) polyprotein
MGVAKNLWDALEVKFGATDVSSELYAREQFHDYRMVDNRSVLDQAHEIQC
IAKELELLKCELPDKFVAGCIIAKLPPSWRNFATSLKH*LRREFSVEDVI
GHLSVEQNSRTKDSHVKEAEGSSSANVVQKNFHKFKGKNSV*QNTTFKKK
GKKKDKKRDDFFTCGSDERWANKCPNKYKKPAQDSKSVNVTLSNNDEASG
YGNMFTILSVCLSTDWWIDTGANIHVCADVSLFSSN*VARDCSVLMGNGS
HASFHGVGMVDLKFTSGKIVQLKNVQHVPAIKKNLVSGSLLCKEGFKLVF
ESNKAVMSRYGLFSGKGYDCGGLFRLSLEGFYNKVMNQIHSNVNESEVWH
SRPCHINFGCMTRLAKTDLIPSFTLAKGSKCHACVQAKQPRKPHKLAKER
HLAPLELIHSDLCEMNGVLTKHGNKYFMTLIDDSTRFCYVYLLNTKDEAL
HYFKIYKAEVENQLEKKIK*VRSDRGGE*FSNEFDLFCAEHGIIHERTPP
YSPQSNGVAERKNHTLTELVNAMLDTSGLSKAWWGEAVLTSRHVLNKVPI
KDNETTPYEQWEKKRTTLSYLRTWGCLAKVNVPIIKKRKLGPKTVDCVFL
GHAKHSVGYRVLVVKTEVPDPKVGTIIESRDATFFEDIFPMRDMQSNSRL
ESDETPEPAIPMEYYEHKSDKSSTEDDEEALVRSKIQRTVKSFGDDFIVY
LVDDDTLSSISEAYASPDADYWKDAVRSEMDSILANGTWEITDRPYGCRP
L*CKWVFKKKLMPNGTVEKHKARLVAKGYTQKEEEDFFDTYSPVARLTTI
RV*LALAASHGILVHQMDVKTAFLNGELDEEIYMQ*PDGFVVNGQERKVC
KLVKSLYGLKQAPKQWHEKFNTTLTSTGFVVNEAEKCVYYRYGGGEGFIL
CLYVDDILIFGTHLKVIEEVKSFLSHNFEMKDLGVADVILNIKLLRNPEG
GITLLQSHYVEKVLSRFGYSDCKPSATPYDPSVRIRKFEGTPVDQLRYSQ
VVGSLMYLACATRPDISFAVCKLSRFVSNSGDVHWHAVERVMRYLQGIAN
YRIQYSRYPTVLEGYSDLNWISDADEMKATSGHVFTLGGGAVSWKSCKET
ILTRSTMDAELTVLDTSCVEAEWLQELLMDLPVDDKPVPAVLMNCDNQTV
IAKAKSSKDNMKSTKHIRRRLKSIRKSRNSGVIVLDYI*TAKNMADPFTK
GLSRIVIENASREMGMRPT

>gnl|PTREP|PTREP89 Retrotransposon, LTR, Gypsy, "RLG_Erika_AF459088-1"; (TREP1305) polyprotein
MLQFSFRWIHLQYFSICVLTVVNLFRMAPAKSTSQNQNQDPPPPPPPPEA
WQAVMAATNANTQLIMQIIQERNQSSQANQGNNQNHFATLNQFLANGPKT
FSNCVEATDADDWLVDLGKHFECSNVRPEDFVKFASFQLKDQAAEWFQQY
RDSRGGRLITWDDFRRDFRAHHIPQSVTESKREEFHNLKQGSLSVYDYNK
LFQKLSRFAKQDVPDEKSMIYQFRAGLRQEIQLALVLFEPLRYDEFYNMA
LKQEAAQLRCDASRKRVRDTTPSSSTQVANQQKYWLPPPPFRQPYQQKSK
GGSGSSHPPNPGFQNKTSSQASRSSAPYHRPLSEVTCNKCQQKGHYANKY
FNQRRLPPPPPVRSASTAVVKHNPKYAKVNMVNAAQAEDSSDVIMGNLPI
NDIPARVLFDTGASHCFMSRPFASKHDFVTQVLAKPLAIVSPARQMTSRV
CVSDVTITLGDHKFLASPNVLGDSDIDLILGMDWLSKHKAHLDCAARQIQ
LTHSSKEVIVFAARDNTIRLFSLNEKGELDAISQIPVVCEYQDVFPEELP
GMPPNRPVEFVIELEPGTEPVCKRPYKLGPEELKEFKKQLDVQERMGLIW
PSTSPWGCGVLFVKKKDGTDRLCVDYRPLNKKTIKNKYPLPNINELFEQL
KGAQVFSKLDLRMGYHQIRIREQDIPKTAFRTSYGSYEYTVMSFGLANAP
PTFSRMMNFIFNPYTNDFVLVYLDDILVFSKNKEDHAKHLCLVLDKLREH
QFYAKFSKCEFWLDEVLYLGHIISAKGISVDPEKVSAIVNWEPPQNVKQL
RSFLGLASYCRRFVENFSKIVKPLSNLLQKHVKYVWSPECDIAFNALKEK
LITAPVLTPPDETKPYEVFCDASLQGLGAVLMQEKKVVAYTSRQLKPNEK
NYPTHDLELAVVVHALLTWRHLLLGRKVDIFTDHKSLKYIFTQPNLNLRQ
T*WVEMIQEYNPSIEYTPGKANVIADALSRKAYCNSLILKPYQPELCEAF
RKLNLQVVPQGFLANLQVSPTLEDQIRQAQLLDAMVKKVKIGIAKSQSKY
KCYRLDDKDTLFFEDRIVVPKGELRKVIMNEAHNSLLSIHPGSTKMYQDL
KQTYWWTQMKREIAQFVNECDVCRRVKAEHQRPAGLLQPLAIPEWKFDHI
EMDFVTGFPKSKHGNDAIFVVIDKLTKVADFLPIKESITAAQLAELYTSR
IVSLHGIPQVISSDRGSIFTSKFWDSFQKAMGTNIRFSTAFHPQTSGQVE
RVNQILEDMLRACVISFGMKWEDCLPYAEFSYNNSFQASSGKAPFEIMYG
RKCRTPLNWSETDERQLLGNDLITEEEEMCKVIHDNLKAAQSRQKSYYDS
KHRDLAFETGDHVYLRVSPMKGTSRFGIKGKLAPRYVGPFKIVSKRGDLA
YQLELPANFANVHDVFHVSQLRKCFKTPERTVNFEDIELQEDLSYREHLV
AILEETERKTRNKSIKFLKIKWSHHSDREATWEREDHLRSKYPEFFQS

>gnl|PTREP|PTREP8 Retrotransposon, LTR, Copia, "RLC_Angela_AY146587-1"; (TREP826) polyprotein
MARAIVLLNFNALLEKAKLKDDGSNYTDWVRNLRIILIAAQKNYVLEAQL
GARPAAGATPDVMNVWQSKADDYSIVQCAMLYGLESGLQRRFERHGAYEM
FQELKLIFQTNARIERYEVSNKFYSCKMEENSSVSEHILKMSGYNNHLIQ
LEVNLPDDCVIDRILQSLPPSYKSFVMNYNMQGMNKTIPKLFAMLKAAEV
EIKKEHQVLMVNKTTSFKKKGKGKKKGNFKKNSKQVAALEKKPKSGPKPE
TECFYCKQTGHWKRNCPKYLADKKDGKVNKGLCDIHVIDVYLTRARSSTW
VFDTGFVANICKSKQGLRNKWALAKDEVTMRVGNGSKVDVIAVGMLPLHL
PSGLILDLNNCYLVPALSMNIISGSCLMRDGYSFKSENNGCSIYMSNIFY
GHAPLKSGLFLLNLDSSNTHIHNVEAKRCRVDNESATYLWHCRLGHIGIK
RMKKLHTDGLLEPLDYESLGTCEPCLMGKMTKTPFSSTMERATDLLEIIH
TDVCGPMNIEARGGYRYFLTFTDDLSRYGYIYLMKHKSETFEKFKEFQSE
VENHRNKKKKFLRSDRGGEYLSYEFGVHLKNCGIVSQLTPPGTPQRNGVS
ECRNHTLLDMVRSMMSLTELSLSFLGYALETAASTVNRAPSKSGEPTPYE
LSVGEENQSWSFLRVWGCDAYVKKLRPDKLEPKSEKCVFIGYPKETVGYT
FYHRSEGKTFVAKNGSFLGKKFLSKEVSGRKVELDEVTIPAPLLENSISK
KTVSVTPTPVSEEANDNDHETLDQDTTEPRRSTRVRSTPEWYGNPVLEVM
LLDHDEPTNYEEAMVSPDSAKWLEAMKSEMGSMYENKVWTLVNLPDDRQA
IENKWIFKKKTDPDGNVTVYKARLVAKGFRQVQGIDYDETFSPVAMLKSV
RIMLAIAAFYEYEIWQMDVKTAFLNGFLEEELYMMQPEGFVDPKGANKVC
KLQRSIYGLVQASRSWNKRFDSVIKAFRFIRTFGEACIYKKVSGSSVTFL
ILYVDDILLIGNDIEFLDSIKGYLNKSFSMKDLGEAAYILGIKIYRDRSR
RLIGLSQSTYLDKMLKKFKMDQAKKWFLPVLQIVKLSKTQCPTTVEDREK
MKYVPYASAIGSIMYVMLCTRPDVCLAISLAGMYQSNPGVDHWTLVKNIL
KYLKRTKDMFLVYGGDKELTVKGYVDASFDTDPDDSKSQTGYVFTLNGGA
VSWCSSKQSVVAGSTCEAEYIATSEAANEGVWMKEFISDLGVIPNASGPM
KIFCDNTGAIALAKESRFHKRTKHIKRRFNSIRDLVQVGDIEICKIYTDL
NVEDPLTKPLPREKHDQHQGSMGVRIITV

>gnl|PTREP|PTREP92 Retrotransposon, LTR, Copia, "RLC_Elena_AY661558-1"; (TREP1521) polyprotein
AIAGVSSISGGYSSDDRPVKIKGSGRRCLAITEKPADFEDANTKECWRHA
MKEELGSIHDNNAWELVDLPNNEKTMELKWEFTIKKEVEGNCVKHKAKLV
FKEYMQDEGVGFKEVFVPIA*MESVRLLIALAAQKSWDVYVNQAPSFIKE
GEEHKVLKLHKVLYGRRQDLRAWNIKLDRTLISLGFEKAPLEHAMYKRGE
GRDRLLVGIYDDGLLITGADQEVTAKFKLQMKELFKMDDLRLLSCYLGPE
VHQNPEGITLCEEAYTRKVHENCGKRDCNPIDASMEPRLELSKKDMVKLL
GYSDSDKEEIVDGHKGNLGMVYFLDENVVSWLS*NQKVMTSTSSEAECQD
VWLRLHGDLMDRDPEQVVLKVDRESMFFLREDPVRRDRSKHIDTTYHYMK
DDVKNEVNYICTEDQLADLLTKALDREKFLKMRRRIGIEVAM

>gnl|PTREP|PTREP93 DNA transposon, TIR, Mutator, "DTM_HORMU_AY661558-1"; (TREP1523) transposase
MTMEAFVVEGGNR*VLRRVTGERAWASYMGFASNPNNSMYGQPMIYVEFI
STSDVAECSSGAGEAELAITVSPDAGPSEPRGGQQVAITVAPDAGPSEPT
GGQQVYDMGYWSAVVDMSEHVEGLPEALDDDDDGHSSASSESDDDEVVPP
EKAVAAAINPEFL*VMSITNEFHSVAGLDAGSLAVGQIFPDKKSAKQAIH
SYAIAIHRQHRVKSSDKKELKLICIHREAGCSGRVIAREKPGVCQTWHVT
KIEQHGCEQTGTLSEHRNVIAEYVSQVMQTIVQQSLNISIRALRATASDL
IGFPVSYSKARHAKEKIFQRLYGAYEEAYSFAPRMLHQISVANRGTQVFR
KERPNPLNPDEQILDRLFWAFA*TIQAFKHCRPVVSIDDTFLTGKYKGTL
LVAMAADANNQLLPIAYALVESENKHSWLWFLCCVKMGVIKDQEGVCIIS
DRNTGLLSVLDIIQASQDPDWG*PDLETRWCMRHLAANFYSKFKNRD*FK
LFKRMCMQKTIAKMNAIWAGINGEIERASLPAREDRRGRQTVINLSQWIS
ENCPNLYKWAQSQDTGARYGIMTSNMSEVYNGVLKGVRALPITTLIDETW
NRTVSYFADRVTVAKALVDLNKPWSEKMQRHLDDKAKSQRHGCRQVDALR
NKWEVSVRAKFVKGHHRGAKKQDVTLGATSCECTCNKPKLLGYPCSHVLR
AAADQKISVEPYVSPYFNMHNLYNTWNGEFWAWGIDMNYKQLWPEGTTWV
PDPALTRTSKGRCQSRRHRNDMDHSQLGEPRRCRVCRCAGHSRRECPYRN
NNTA

>gnl|PTREP|PTREP94 Retrotransposon, LTR, Copia, "RLC_HORPIA_AY661558-1"; (TREP1524) polyprotein
MKVILEVRHLWDVIDTGVGDFDDDRMALEAILRAVPQEMIPMLAVKDTAK
ETWDAIKTIRVGADRVRDSKAQNFRKQYEDLRFKPGESVYDFGLRLQELV
HQLDVHGDPIDDKKVILKYLRIVPKRYRQMARSIESLLDLNTMSIEELTG
RLKVCEEDDDEEPAGAANDGQLLLTREQWRAREKEDTPSGSGGGGGNRRD
KGRGHDGARDKPRGGGAQGAARDDKCRCCGKLGHWARECRKKKREEAHLV
KEGARRSPRHTLRHN*TSSSPSTHESRTASRVFLNEEQAIVRLGEDQEPV
DVPWYLDSGASNHMTGSRAAFADLDTKIVGTVRFGDNSIVDIKGRGTVVI
SVSGDEHRSLTDVYFIPKLKTSIVSLGQLDESGCPSLIHGGYMTVWDRQN
RLLAKVPRSPNRLYKVNIKIVQTDCLSVRRCDTAWTWHERLGHQNFGALR
TMSRSGMVRGLPEIGHADQLCDACLAGKQKRVSFPQAAKFRATARLELVH
ADLCGPISPATPGAKRYFLLMVDDYSRYMWLAMLTTKDEAEMAIRRIKAA
AEVQSGCVLRTLRTDRGGEFTSRSFDDFYADNGVQRHLTAPYTPQHNGVV
ERRNQTVVASARSMLKGRSVPSAFWGEAVTTAVYLLNRSFTRAVDGKTPF
ELWHGTPPSLHHLRVFGCVVHVKTARPHLKKLEDRSKKMVLLGYEPGTKA
WRVFDPLTQRVHVTRDAIFDEAASWSWEGAGIETQNGDFDIAYTPPTAAL
RGSEGAREGAPAPPPSAPAEADDEVDVEAPPATPPPTETPATPPVATPHV
PPCAGVEFATPGADNTPTAEERDSPMRRYRTLANIEEELEQDLFLAEGEE
PATLVEAQSEAGWRAAMAEEMAAIKENNTWELCDLPAGQRPIGLKWVYKL
KKNPTGEVVRHKARLVAKGYAQRAGIDFDEVFAPVARLDSVRVLLAVAAH
HSWEVHHLDVKSAFLNDDLTEVVYVSQPPGFVVSGMEGKVMRLKKAMYGL
RQAPRAWNSKLDHTLRSLGFTRWPSEHDVYARGGEGSRLLLGVYVDDLIV
TGVGTLEIAKFKQEMTDRFKMSDLGLLSYYLGIEAEVTQQNGKTTLCQSA
YAAKLLEKAGMADCATA*VPMEPCLKLSKTSSNPPVDVTLYRSNVGSLRY
LVHSRPDIAFAVGYVSRFMEKPTTEHLSAVKYLLRYIADTKNYGYVIHSS
NKQLELVGYSDSDHAGDLDDRKSTTGSLFLINGCPVT*QSAKQQVVALSS
CEAEYMAASATACQAAWLRRLLGELLSKEEETMKIYIDNQSAIQLIKNPV
FHERSKHIDTRFHYIRRYVEEGKIAVHIGTTNQLADILTKSLGRIQFQEL
RGRIGITNITED

>gnl|PTREP|PTREP95 Retrotransposon, LTR, Copia, "RLC_Inga_AY661558-2"; (TREP1527) polyprotein
MEGEEEVNHGQPEGMDLTSVTRDDLNSAMAALNTSLTSEVKTMLKELIDG
LKSSPEPALVVKPTISDSEANSSKEAAKGMQPASPHEKDGTGTHASVPPP
MTYGGPVLAPRLNPVGPPPKLVKGDFANWVFSIKSHLNHSSTNLWRIIEQ
GYYPHDPSNLTPREDADNQYNHSALFILQSAVPPEDLPHLRPFTLAKDCW
EHIMVLYKGSSSIQLSNYEVILDQADEFVMKEEEDPRDLYRRVTAIAVAL
KDHGSKDVDDTWVKRKFLKAIMPFNKAMSSVIRQRPDFHSLSSSEVLDEF
IAMSIMNETADNALARVRSKTTSPKLALKARVMLEEEEEDEEEESFPEDT
KYAYHEHMALASRQFWGNKRNSRPTFNKNNSSGFKPKQRVRTCYNCGNVS
HFVAECPYEKREDNGGKLIRKDKTKSFPIKNNFVKKPHPKGMVALEEYPS
DDDDDDDTVATTTVAIATTPSQKVSLFNAPNENHITKCLMAKGTNQVTSI
IKTNITSAPSLLNCVEDSDVGELNEHDLDKFLCTIKGETKKHFVALLEQL
GEATDLIESHEETISELHGHSRDYADEIAELSSTLEEERTLRLALEESYN
DDCTKMQKKLDHDVVLTRMLKSEKYALEVGRDRLKEEFDILDKAHKALKG
AHFALKDTHDQLQAKLTKEISTCPPFVLIDNTCATNPYCEHVHLVEENAK
LKEKLEKGLVSCRQGEKSLNDLLSTQKGVVGKEGIGLTFKSKGKIKNKSK
RSLTLMDIFVKEGEGTQKVNRNKVDYGNLKKGKAAPTNTAGKLNSSYVLC
CASDGHVYARFIGSYDEDIERAIWVPKTLVSNMKGPIKKWVPKTKPDLLQ
EFASGGVSWLLDSGATNHMTGSKDLVVDVHPSPSMPTHVQFADASSSKVL
GFGKVVVSQDLSIEKVMLVESLAYNLLSIRQLAIMGFSTFFNIDTVVLLR
SKTLKVAYVGHVENGLYVVNFSKRPTKTATCLMAKVDVGWLWHRRLAHVN
MRSLQSLLTGDHVRGLTNVSFAKDRVCSACIEGKIHETAHRPITLIYTKR
PLELLHMDLFGPPTFDSLGGRKYCLVIVDDYSRYTWVYFFKRKSETQQTV
INFANEAQRQHESKILMIRSDNGTEFKNYTLDEFLGDEGIKHQYSAPYTP
QQNGVAERKNRTLIDAARTMMAEFKSPYNFWAEAINTACHASNRLYIRKG
LNKTPYEILTGNKPNLKYFRVFGCKCFILKKGARLAKFDSRAHEGIFVGY
ATNSHAYRVLNKSTGLIEETCNVEFDENNGSQVEQSGLCDIGDEIPPEAI
RRMGIGQILPIEEPLMAEGEGQCSTQVEPSPPQAPHASDEQRDDSQQVDQ
ALGQDQLPNNGDMPTQALPQDLEPTRDQDQEQPLIQDQTSEPAQVEGQSD
QETVSQFPSGAPTTGSRRKGKQKIQVDAPLLSNEELLERRAAKNANKLKA
KSHLMKNVLGSLKRGVSTRQQLWNYCEHHAFVSYCEPQQVQEALDDEDWL
MAMHEELNNFERNQVWDLVPRPTKEHNVIGTKWIFKNKQDANGIVIRNKA
RLVAQGYSQVEGIDYGETFAPVARLESIRMLLAFASHHNFKLQQMDVKSA
FLNGPLNELVYVKQPPGFEHPKLPNHVYKLNKALYGLKQAPRAWYEYLTE
LLQDRGFEIGKIDPTLFTKRVKGDLFICQLYVDDIIFGSSNISFNEEFAA
LMTEKFEMSMMGELKFFLGFEIKQGLEGTFIKQAKYTQDMLKRSELKDVK
PVKFPMPTRCKLDSDPNGKGVDQKVYRSMIGSLLYLCASRPDIMLSVGIC
ARFQSAPKESHYMAVKRIFRYLAHTPNFGLWYPKGANFNLVGYSDSDWAG
DCVERKSTSGGCQFLGRSLVSWSSKKQNCVSLSSTEAEYVAAASCCAQLL
WMRQTLKDYGVTCDKVPLLCDNQSAIKISLNPVQHSKTKHIDIRHHFIRE
HIKLGDIEVHFIHTEEQLADIFTKPLDEARFRELRHELNIIDSSNV

>gnl|PTREP|PTREP96 Retrotransposon, LTR, Gypsy, "RLG_Jeli_AY661558-1"; (TREP1529) polyprotein
MHLSPSRRSPVTGLRTSVPVPAASFFSSSRPRCRPSPPSRAATSGPAVRC
SSVGCDTPRRARARPLKWRSSSRLWSRRRPSAWTQFQLSYLPSTWVAGLQ
PKFSWQIPIKVPTGLAGTSTRSANRPALAVNPTVLPVDALVRATSRSSVH
PSSTWLPLPRIVDSLQPTDSEGRRGIEQMRALLHTAQQQNSAVSQSHNRI
HNSSVHANTHRSVYSPHSHQRRRGGNRSTNPEDRRRSRTPPRGGPYGPRH
HDDRRGVQSVTRMIQGPTARGYIGQRKVDRSRAHRDGHDRDRPSGSRTIV
SGPECFSRAIRSADIPPNFRLATGISKFTGESKPETWLDDYRVAVQIGGG
DDQVAMKHLPLMLDGSARAWLNQLAPSSIYNSANLS*VFIRTFEGTCKRP
AGLVELQHCVQKQNEPLRDFIQRWTTLYHTVENVIEHQAVCAFKAGVRYR
DLYLKFGRTGDISMSKMMVIAARYANGEEEDRIRSGKHKAVADGDGNSNR
KQKQKAPSTPQAEAAAVTNAKFKGKGKAQYTPKKKQFGNSILDQPCPIHT
KMDEEGNAIFPKHTTRQCRLLIQGFGEGQPSEKDMERDDEDKEDPFPQVH
ATLMIFADVESKSRLKLVNREVNMATPTNPTFLKWSQTAITFDQSDHPAH
VPTPGRQALVVDPVVGGVRLRKVLMDGGSGLNIMYADTLKGMGILMSKLS
ESSMQFHGVVPGRKAKSLGQIALDVVFGSDKNFRKEKLTITFEVVDFQSA
YHAILGRPAYARFMARPCYVYLKLKMPGPKGVITITSNRQRAEECLLQGS
WIVDQQMAILKLDEYKKMSDPANLMRSKKRASESAFQSTSDTKKVSIHPT
DDTAAPTNISTTLDPK*EAELIQFLHENWDIFAWKPADMPGVPRELAEHR
LHVDPTARPVRERLRRSAAHKRKVIGEEVAKLLAANFIREVHHSEWLANV
VMVPKKDKSLRMCIDFKHLNKVCPKDHFPLPCIDQIVDSTAGCERLSFLD
AYSGYHQIHLYGPDELKTAFITPFGCFCYITMPFGLKNAGATFMRMIQKC
LLDQISRNVEAYMDDIVVKSRKGSDLLTDLAETFANLHRYDIKLNPAKCS
FGVPRGKLLGFFVFERGIDVNPEKIETILRMERPVRIHDVQRLTACLAAL
SRFIARLGEKALPLYRLMKKSDTFEWTDEAQIAFDDLKALLSTQTVLNAP
LSKEPLLLYIADTNHVVSTVLTVEREEEGKAYKVQRPVYYVSEVLTPSKQ
RYPHYQKLIYGIYMTAKKVAHYFQDHSVSVVSDALLSEIVHNRDASGRVA
KWAMEMLYYDIKFEAKKAIKSQALADFIAEWVEQQQPTHIYSAHWTMFFD
GSKMLNGSGAGVVITLPKGDKLKYVLQIHFDSSNNEAEYEALLYGLRMAI
TLGVRRLMVYGDSDLVVNQVMKEWDVRNPTMTAYYNAVRKLKKKFEGLEL
HHVPRLKNQAADELAKLGSTRRPVPSDVCLEHLHLPSVKEDPFTEEPVQP
KSSTDPTEVEVPVVVDLIMEIFAIIPDWTVPFIAYILRQELPEDEVQARQ
IVRRSKSFTVIDGQLYKESVSGVLQRCISPEEGQLILEEIHLGTCGHHAS
SRAIVAKAFRAGFFWLQANEMAKDMVDRCEGCQFYSNKSHKPTSALKTIP
LVWPFAVWGLDTVGPFRTGQGGFTHLLVAVDKFTKWIEAKPIKKLDALTA
IKFVRDIISRFGVPHSIITDNGTNFDSDRFKGFCIGQGIRVDFASVAHPQ
TNGQAERANGLILQGLKPRLLREVGHAADTWVNELPSVLWGLRTTLNRST
GRSPFFLVYGAEAVLPSDLLHNSPRVELFSEAEAEQARQDVVDLLE*ERE
MALTRSTIYQQDLWRFHARHVRSRTFQAHDLVLRVDQQRPHKLAPA*EGP
FIISKVMNNGAYRLYNLDRETDEPRAWNGDLLKRFYT

>gnl|PTREP|PTREP97 Retrotransposon, LTR, Gypsy, "RLG_Laura_AY661558-1"; (TREP1534) polyprotein
MSLFVRMVFTRLNRAPAHEQGEGSQASQEDLPHPPSLVEVMLEAERNKRE
TNRLLERIEQNTARQPRNAAVSLNDFVKLNPPKFHHFVDPLDADDWLCSI
SRKIRSANVSEADKVTFTTYFLEGPANLWWENFEAMRPAEPVATWADSSA
AFRLHHIREGLMDRKREEFCAFT*GKLSVDAYSREFGNLARYATEEVSTD
AKKQARFRKGLSPELRRDLRLHECASFQALVNKAISAETGHTDFEATRKN
SRDFGSSSGSAFPKRRLWVPNSSLPPRYTLRPSYVAPQTNQANPPAKAYG
GPAGNAAPRAN*VICYKCGEPGHYSRECPQNVGAKQPGKSVGQAKSGKEF
YVKPTPARGRVNYVSAEEAAEDPDVMLGTLLVNHHPASVLFDTGSSHSFI
SESYAQLHNMSFCDMPIPLVVQTLGRKWQTSRITYDNEILVDRLVFLASL
IALKSLDINIILGMDWMSAHYAKIDTHSRNVQLTHPSGEIVNVSTRVAKC
QLYSLNANPLPELEDIPVVRDFPDVFPEELPGIPPDRDVEFVIDLVPGTV
PIARRPYKMAPLELAELKKQLDEALSKGFIHPSSSPWACPVLFVKKKDGT
DRMVVDYRPVNLVTIKNKYPLPRINDLYDQLAGSSVFYKMDLRLGYHQIK
IKNGDIPKTAFVTRYGQYEYTVMSFGLTNAPATFSRLMNSIFMEYLDKFV
VVYLNDILIYSKNEQEHAEHLRLVLMKLREHRLYAKFSKCEFWLPEVTYL
GHVISGKGIAVYPERVQAVLDWTQPESVKQVRSFLGLASYCRRFVENFSK
VAKPLTELLKKDKKFEWTPQCEHSFHELKRRLTSAPVLLPPDFSKDFVIY
CDASRQGLGCIVMQDRHVIAYASRQLRPHEDNYPTHDLELASVVHALKTW
RHYLLGNRCEIFTDHQSLKYIFTQPDLNLRQRRWVELISDYDLGITYTPG
KANVMDDALSRKSNCNNLMLQQGQPLLHEDFRKLNLHIVPQGFLSTLVAK
PTLKDQIIAGQKRDKGISRIKENIFSGNAKEFSINDQGVVFFQNRLMVPK
NPHLRQLILKEAHDSPLTIHPGSTKMYQDLRQRFWWTRMKREIAEFVANC
DVCRRVKAEHQRPAGTLQPLAIPEWKWDKVSMDFITGFPKTKKGNNAIFV
VIDRLSKVAHFLPVRESITTSQLAELYISRIVSLHGVPLEINSDRGSIFT
SRFWESFQNAMGTHLSFSTAFHPQSSGQVERVNQILEDMLRACVISFGMN
WEKCLPFAEFAYNNSYQSSLGKAPFEVLYGRRCQTPLNWSETGERQFFGP
DMIQDAEEQVRIIREKLKTAQSRQKSQYDRHHKAVTFEVDEKAYLRVTPL
KGTHRFGIKGKLAPRYIGPFRILAKRGEVAYQLELPPHLSKVHDVFHVSQ
LRRCFSDPIREVDHETLDLQDNLSYREYPVRILDPAERTTRRRNLKFLKV
QWSNHSEKEATWLREDRLRLEYPALFRRLLNLGTRFF

>gnl|PTREP|PTREP98 Retrotransposon, LTR, Copia, "RLC_Rada_AY661558-1"; (TREP1536) polyprotein
DASNLWHMRLAHMSELGLTELHKKGLLKGYETGKLKFCEHCIFDKHKRVK
FNTSTRTTEGILDYVQSVSCAPSRKRSLGGASYILTIIDDYLRKVWPYFL
KHKMTSFLTFKEWKIMIERQTEKKVKLLRTDNGMEFCSNKFENYCKSEGI
VRHYTVPYTPQQHCVSKNMNMTIISRARCMLSNAGLHRRFWAEVASTACY
LINRSPSIPLNKKTPNQVWFGSPVDYSQLIVFCCTAYAHVDNGKLEPMAV
KCIFLGYKYGVKGFKLWNPETQKVVIRRNVIFNESAMLHDVSSTNVPLES
EQQPTIQHPTVHVEHVISGDTSDKENIDAHDELAVDDEYVTPNHPIVPAS
WNLARDRVRRGTNAPKRLIEECNIVSFDLSVEEEIEGNVDPFSYSDTIIS
NDSNKWMTAMHDGMKSLEKNDTWDLVLRKGLNKTPYEILTGNKPNLKSFT
VSGCKCFILKKGVHLSKFEPRAQEGIFVGNATNSCGYRVLNTSNGLIEET
CNVEFDENNGSQVEQSGLSDVGDEIPPQAIRRMGVGHFLPEGEGQCSTQV
EPSPMQDPHASEEQNEGPQPRGQDHEQDQSNDDGVS*NDAQDKVHIPEQA
QDQDQIQDLEQAHDGAQDHQDDAPQNVVPQLSMEEIVERQAAKIAAKLEH
KQHLLKTGVTTRRQLTNFVNITRLFLALNPSRYKMRSRTWSGLKPCMMKN
FERNKVWRLVPRQKEDDNVIGTKWILKNKQDANGVVISNKARLVAQGYSQ
VEGID*GEAFAPVPHFESILVFLVYASHHDFQIIYMDVKIAFLNGPLKDL
VYVKQPPGFEDP*FPNHVYILNKALYGLKQAPRRAWYEHLTEMLQDRGFE
IEKIDPTLFTKMVKGNLFICQLYVDDIIFGSPNKAFNDDFTTLMTK*FEM
SMMGKLKYFLGFEVK*QSQGTFINQAKYTQDMLKRFNMNELNPPKANTPM
PLKCYLIFDPNGKVVD*KVYRFMIRSVLYLCAFRRDIMLVVRICARFQST
PKESHFMAVKRIFR*LTHTPNFGLW*PKGASFDLIGYTESD*VGDRVKRK
STSGGCQFLGRSLISWSSKKQNYVSLSSTEAEYVAAAGYYPQIL*MRQTL
MDYGVICDKVPLYCDNESTIKISNNPIQHGKTKHIKIRHHFVRENIKRRE
IDLIHLNTNGQDT

>gnl|PTREP|PTREP99 Retrotransposon, LTR, Gypsy, "RLG_Sukkula_AY661558-7"; (TREP1556) polyprotein
MLSVFRMAPPTRQTPAREDMPPPPPPPPPPPPPPAEAWQAMMAATNANTQ
MLLQLIQERANHQQGNFQQGGNHFASLSQFLSNQPRTFTSCDQPFDAEDW
IRDMNKHSECSNVRPEDYVKFATFQLKGQASIWWQHLKDSRGGRVMSWDE
FCRDFRSHYIPSSFVEEMREKFRRLKQGNNSVYKYNVEFHELARYALQDV
PDQKSKIYQFRGGLKEDLQLALALHDPEEFDKFYNLALRAEAALLRVENS
KKRFRDSSSSSTQVVQKQQRFWVSSPPPPRHSQQPKHSGGRGSSRPPNPG
FQQRYQQQKQGPPQIQFRQPADVTCHKCGQKGHYANKCTSQLRLPPPPPG
KPPSNALVKFNPRLARVNMVNAAEAENSSDVIMGNLLVNDFPAKVLFDSG
ASHSFLSYPFAAKNDIHLQELARSFDIVSPGMLMSSRWFAPDVSIKMDNY
AFLASPYVLGKSDIDLILGMDWLAMNKASIDCEAKEVKMTHSSEDVIIFA
ARDDTVRLFSLNEKGEINPIEQVPVVCEYQDVFPEELPGMPPHREVEFVI
ELEPGTEPVCKRPYKLGPEELKELKRQLDEQERLGLIRPSSSPWGCGVLF
VKKKDGTERLCVDYRPLNKKTIKNKYPLPNINELFEQLKGAKVFSKLDLR
MGYHQIRIREEDIPKTAFRTSFGSYEYTVMSFGLPNAPPTFCRLMNYIFS
PFKNEFVFLYLDDILVFSEDEEEHEKHLRLVLDKLREYKLYAKFSKCEFW
LKEVVYLGHIISAEGIKVDPSKVQAIVEWEPPQNVKQLRSFLGLAGYCRR
FVENFSKIAKPLSSLLQKGVKYVWSPECQLAFDTLKEKLTSTPVLAPPDD
SKPYQVFCDASLQGFGAVLMQDRKVVAYTSRQLKPAEKNYPVHDLELAAV
VHALMTWRHLLLDRKVEVFTDHKSLKYIFTQPNLNLRQTRWVEMLQDFNP
SVEYTPGKANVVADALSRKAYCNSLILQPLQPGLSESFRKLNLQLVPQGF
LANLQISPTLEDQVRAAQLLDAMVKKVKIGVGKSLPKYKCFTMDARDTLF
FEDRLVVPKGDLRKVIMEEAHNSLLSIHPGSSKMYHDLKQSFWWTRMKRE
IAQFVNECDVCRRVKAEHQRPAGLLQPLPIPEWKFDHIEMDFVTGFPKSK
KGNDAIFVVIDKLSKVAHFLPVKESISAAQLAELYTSRIVSLHGVPMMIS
SDRGSIFTSKFWDSFQSAMGTKIRFSTAFHPQTSGQVERVNQVLEDMLRA
CVISFGMKWEDCLPFAEFSYNNSYQASSGKAPFEILYGRKCRTPLNWSQT
GERQILGNDMIEEAEKMCRIIRDNLRAAQSRQKSYYDGKHRDMSYELDDF
VYLKVSPMKGMQRFGIKGKLAPRFVGPFRVVGKRGDLAYQLELPATFANV
HDVFHVSQLRRCFKNPERTVHLQDIDLQPDLSYREHPVAVLEATERKTRN
KSVKFLKVQWSHHSDKEATWEREDHLRSEFPDFVQS

>gnl|PTREP|PTREP150 DNA transposon, Helitron, Helitron, "DHH_Hector_AY642926-1"; (TREP3300) hypothetical protein
MITGRYGTVTSEDPMQTNAQTIAGTSEVDNNQCQEQFPEYPNFESLQDLN
FDNEQPDEAVECTSDQCLDEDDTDSESGDELSLGHKGKSSAMDVHNVGEK
EYTEIGIEKEQLTQDDILMFLEDESIAAARTCSQEVRSHYVPVVDMTFDT
QEAAFGFYNEYASICGFSVKKAGYFCAKKEGGSAPTRITFKCNRSGKMID
EEEKEARLRKRRETRQQKTGQVPRENLIKKKTNTIDITGCKAQLIITKKN
EKWVFTTVNLEHNHDLSPPSETKYLRSHKHMTEEEKLLIRTFNAVKLPTR
KIMTILSFLRGGNTPYTKKHISNVRTAIGKETNQNDMMQVLTYFRKKQAE
DPRFYYAFKTANVSDEASKVLCIFWADGYARKMYDLYGDCLSFDTTFKTN
RYNLPFAPFVGITGHSQNCLFACSIIENETTDTFKWLFETFLHCMGGKAP
VTIITDEDAAMKTAIPMVFPNSVHRRCLFHVKKKAEEKCPRTFATKENLH
ADFSDIIHNSLTEAEFEWLWPDMIERYGIQHVKYFNLMWKKRKRFVPVYF
KKNFFPFIHSTARSEGTNAVFKDNITSTHSVISFLEEYQRISQNIQDNER
QQDSITRTTQPTFWAHSELEIQAATMYNRKIFYRFQKQIKIVVNLHVEEI
ERNVRYEVYKTEMMAAKDFRQRRFVVEVNMQQQEFSCICAKFLKDGILCS
HVLRVLSHLNMLKLPQKYYIDRWMPQDEKDIRDKRFNVPIDLTAGSQHLR
YTLLSSRLNEMASDGASTNRKYLYVVGESERVQQRLDEMTKEDEAAKGHK
THDGHTNVEDCCTGPHPNGFGDNLQDPDVAVSKGRPQTGRYKTFMETLMA
KQKIHCSRCGSETHNIATCTARNDSIVQPQGQNVPRKRASGVVEK*

>gnl|PTREP|PTREP151 DNA transposon, Helitron, Helitron, "DHH_Hector_AY642926-1"; (TREP3300) hypothetical protein
MEDALLDKGSEPLFESDSDIAVDKRTDSEINADLRRYLTQKKLERFNELE
DKANNGVVPKAYIRCSVPYFVDVVKTTRKSQSKVDLVKGIGFAYLLELDD
SVVPRHFTQWVADEVCVEDQIISINNRTITLNAESVLHVFGIPAGETIIS
TSDDGGKEEFLALFGLSEVPTIKFFGNKIIKEEDLSDDQFVRCFMVVALA
TFLCPTSNTKPSAKYMSALLDVGKIKDMNWCKFTQTWLLQAIKKYHKDKL
KQTSLDFIDFGPIQLQATMPRICVWKGNLIKLFSETLMDKIGAYGDCNAN
IYLSFQQHMREEGPNTCSKVKNLILEVIQIVTRATCDSEKTLKIDSSANQ
HNSTNHGHDSEATFLIPNLFLIFCHQAGFIYFTFRNHHVLQHTNSSKQKN
FSVHCTQQPRNMTCETPRPLTAIRPDGSVIDLVRITNIFWSYILFSSYCT
NYTLIFSVLFFTLKFLLFLIHILIDAFSEIFFLHQGSFNHQIVGRRLFPD
ECNVGYLLDGTEQVPVTFNDSQPVVILYAYCYASPELQILGERSLQENCL
NMLGNSDEHYNTRLLLGSTSSSIGKENVPTKRIVQPSRYLCSPYDNKDRG
SLMIHEIELYNNLMILSRSADFKGRWVVEIDNTRVSMEQLGNSFREKGWV
ESYVINVFCRKLFRDNHPRTSQRHFFFHTASWKNEASRLQWRDRLIKSFI
GAGKARDLQLCNELFFPTIHRSHWFVFLVDLSARKFIFLDSKYDGEHTFH
KEIKQMMVSCHGGEHRNRTCDYQCVVTFFSLFYKTG*

>gnl|PTREP|PTREP152 DNA transposon, Helitron, Helitron, "DTC_Helios_consensus-1"; (TREP3439) hypothetical protein
MQIGFDDDSHDGDEVTNMSSAESVDIDPFDFVYSNLPDRTHILKHAKNRD
HCKAKKFESQTDGFCCRNGQIELKEPDPIPELMRLWSSMDADSRHFRENI
RFFNGHFAFTTLGVNLDENYTNMKSGVYTFRAHGTIYHNVHSFGPCSRPE
HLQLYFYDDDPNLTHRKVATKQLDQNVVKVLVDILRANYSQQFRSLGAHK
DHLDDYMIDLNTDQRLDQRRYNRPMSSEVAAIWVEGADVAKRFDRSITLF
GNDNHRHSIGVIDGSYDPLSYPLFYPCGELGWHPKLPKRNVPWEVVQQPR
RWHDNEEDAGSLSLLCYYENNIRLICILTKGATLPVAEGNSRLCVSVRDY
YCYRLQTRTAILNPILCGARLLQQWVVDMYIKIESCRLRWYRKNQTKIRA
DLYKGVVDAITPGETRASAVGVRIVLPGTYPGGDRDMKRRHTDAMSIVHT
YGKPDIFLTMTCNPKWEEISNELLPGQTAQDRPDLVARVFYGKLEAMKEL
LFKKHILGVVVAYVYVVEFQKRGLPHAHFLLIMDASYKLVVPEQYDRVIS
AELSDKHKYPELYALVVKHMMHGPCGALNPNNVCMQQNKCKCRYPRAFNE
NTAQGKPYPVYRRRDDGHRAKVRGKVLDNRWVAPYNPYLLRMFNCHINVE
VCSSIKAVKYLYKYIYKGHDRASFSIDQPDADGIIDEIKRYVDARWVTPP
EAMWRIFGFSLWGNSPSVLQLPLHLPNMHMVAFNEQADLTNVLASENASK
SMLTEYFKANQDHPWARHILYKDFPGSFTWQRTKYWKPRVERYQIGRIVS
ANPAEGERYHLRVILNHVAGKTSFEDMLMDGILCGSFREAAERLGLIEAD
NTLDDCLTEAEQWAMPCSLRRLFATILVHCEPGDVRGLWDRHFEPMCDDY
RRAHKCTNDVEQMVLLDIRGILQSMGKDIVDFALPCIDDEFDPTGGEARE
VIEESTVEFDVNDTKLASSLNLEQRVAYDEILAAVDRSDGGVFFVDGPGG
TGKTFLYRALLAKVRSKGNIAIAIATSGVAASIMPGGRTAHSRFKIPLSC
DDGASCSFAKQSGTAKLLRMASLILWDEATMTKRQAVEALDNSMRDIMGR
RDRPFGGKTVVFGGDFRQVLPVVRRGSRSQIIDATLSSHLWKGMRQLRLV
TNMRAHNDTWFADYLLRVGNGTEEADEHGNIQLPEDICVPSTGEMNDMEK
LIDHVFPGLDENMSDPNYMTCRAILSTTNDNVDKINLRMIDRFKGEEVIY
HSFDSAQDDPYGYYAPEFLNGLTPNGLPPHALKLKLNFPVILLRNIDPAN
GLCNGTRLVVRGFERNAIDAEIMIGQHAGRRVLLPRIPLCPSDNDMFPFK
FKRKQFPLRLSFAMTINKAGQTIPIVGVYLPNPVFSHGQLYVALSRATAK
RNIKILIEKEKDKGKKQTNKSNKRKRPTLCLQRTMKNIVYKEVLTS*

>gnl|PTREP|PTREP153 DNA transposon, TIR, HAT, "DTA_Aurec_58l25-1"; (TREP3002) polyprotein
MAGSGSSQLASSSLKRKSDDMAWEFAELIDPSDPQRLKCKLCGKIMSGGV
TRMKEHIGQIKGAVTSCMQATQD*ITRAFASHKAPRRKKLAKQKREEEVK
VVITIEVNEDDQEQLNEVGEGTPKKGAMDQYLAPIDPSIPLKYKK*YTIN
DSVDKERSYKVRQYLARWMYKKKLPFNAINDDDFKQFCEALGRYGPDWKQ
PSQYMIREKMLVQEVERTRDLLKPHEVERADTGCSVMTDAWTDKKKRSIM
NLCVHCKLGTVYLGSKEVSADAHTSLYIFNYVDECIEKIGAKNVVQVVMD
NASNNMGEKVMLKDKRPKLFWTSCATHTINLMVEAVAKLKHFGSTITKAK
EMTTFLYAHHTTLVLMRSYTKKRDIVRPGVTRFASAFLTLQSLDAKRKQL
KEMCCSDTWEGCKHTRTKKGQVAHAAIMSRAFWKNVSLCIKVFEPLVKIL
RLADGDGQSMASMYGEIIEAKKAILVAVDNSDKDYKAITTAMESKMNGRL
DTPLHIAAYALNPYYSYATTSMFTNVEVMSDLMEVIEQFYLDDDEKQNKV
LNIDLPKFKKKERMFGKVVATKAISNANFNAGEWWATYGLQTPTLMHIAL
RILNLTTSSSGCERNWCVFEQVDAKRRNKLDVHHRDDLVYIQFNGRMIDK
RKEYSSSCDVLLGEDAFMAQDWICEGAYVDAMEEVDAMGASEFVELHRSS
RVRELHEVEEFVSDGEESDHGLVNEDDIEFKSDDDGVIQGANEDEEGDPM
EP*

>gnl|PTREP|PTREP154 DNA transposon, TIR, HAT, "DTA_Harper_M801L24-1"; (TREP3003) polyprotein
MASEPQEIMGIEASAPVPTSTLIVAGAVLTNMEKASVDGELQAGETEKRD
GGKAQVVEVEKKDGRRQMVSRSEMWNHFEKVMMDGVLQKGKCNYCKSDIS
AHPVINGTSALRKHFNICKRNPHRNIGDDKQAVLQINQGDSVHAWKFDPD
AIRAAFAEMIIEDELPFAFGEKSGFKKFMSKACPRFSVPSRRTCTRDVVR
AFFEQKAKLKLFFKGQCERVCLTTDGWTSQQQDSYMAVTAHFICNEWKLH
KKVISFFKVNGHKGDDIGKYLQKTLIDWGIEKVMTITVDNASNNDGGIGY
MKKELNKAKTCIAGGKYLHMRCAAHIVNLIVTDGLKELDVSIKRVRAAVR
YVKNSPNRLTKFKECADLEKLDTKAFLILDVSTRWNSTFFMLKAAICYEK
VFARYADEDPYFAVDLLSDKGKDKGVGVPDEQDWENVKKMADFLGHFAEL
TTRVSASLHVTANKFFHEIGEVNLLVRSWMESEDGLQIAMAERMKDKFDK
YWGNWHELDTSKKGKEKENFNLLIFIATTLDPRYKLSEYTQFAILEMYGE
DKGPKVCTAVSTCLRDLFEEYRVMYGPNIPSYETSASHEVQSSGGRVSMM
KSLIAKKMRLNSGGSSSSKSELDKFLAEEPEDDGPKFDILDWWKINSSRF
PILACLARDVLAVPISTVASESAFSTSGRILDDFRTSLTPFMVEALVCTQ
DWLRYGTYINIAENTEELTKLEQGNLI*

>gnl|PTREP|PTREP155 DNA transposon, TIR, CACTA, "DTC_Alfred_consensus-1"; (TREP3435) transposase
MEDREWMYTGRRGRNDVTTEWIRKTDDFVERAYGEAAKGASLVPCPCSKC
ANRKRKPKKAMVEHIWKNGFTPGYTRWIFHGEAHRTREEVLRQRVEDYDA
DAGVADMLNDYQEAQYTGGCMDDEPEPTAKAFYDMFDAAQKPLHGQTKVS
QLDAIGRVMAFKSQYSMSRDAFDGLLTVIGSLLPDDHVLPKSMYEAQKLL
RALKMTYEQIHACPKGCVLFRKEYAEAKYCPKCKSSRFMEVDSGDGQKRQ
LDIPLTILRHLPFIPRIQRLYMTEESAKQMTWHKNGKRYNPDKMVHASDG
EAWKHFDAIHREKAEEARNVRVALATDGFNPYGMSAAPYTCWPVFVIPIN
LPPGVCFQRQNIFVSLIIPGHPGNKMGVYMEPLIDELVRAWEEGVWTYDR
ATKTNFRMHVWYQYSMHDLPAYGLFCAWCVHGKFPCPVCKEALRFIWLKK
GGKYSSFDKHRQFLPPDHPFRLDIKNFTKGVVVTDRPPATMTGAEIRQQI
DGLVANTEGGFVGYGEQHMWTHKSGLTRLPYYDDLLLPHNIDVMHTEKNV
AEALWATIMDIPDKSKDNVKARVDLAALCDRPNQEMKPPSGGKTWRRPKA
DFVLSRAQRKEVLQWIKMLMFPDGYAANLSRGVNLSTMRVLGMKSHDFHI
WIERILPAMVRGYVPEHVWLALSELSYFFRQLCAKELSRTVVADLERLAP
VLLCKLEKIFPPGFFNPMQHLILHLPYEARMGGPVQGRWCYPIERCLKTI
RKKCRNKCKIEASIAEAYILEEVSNFTTTYYGDKLPSVHNPPPRYNDGDN
ESNLSIFRGQLGSASGSTTKTLTHEEWRHIMLYVLTNLEEVTPYMEQFLH
EFWRRSRDPTPQEYDTLLRKGARNGLPDFISWFKRKVGQRDPSMSAELRQ
VANGFAYRVKKYSRYDVNGYRFRTTNYDKSRPNRKTTCSGVFTPGLDDVD
YFGRIEEIYELNFYGSKPLTPVIFKCHWFDPQVTRRTHSNLGIVEIRQDS
TLPGDDVYIVAQQATQVYYLPYACQTKEHLKGWDVVYKVSPHGRLPVPND
EDYNLDPDTYDGEFFQEDGLEGRFEIDLTEAIGMDVDIEMVVDEEDDEVQ
NDNDLVILEGNDINDELASSDGVEFEMVDSDDESYDPANPDTYEDYF*

>gnl|PTREP|PTREP156 DNA transposon, TIR, CACTA, "DTC_Alfred_consensus-1"; (TREP3435) ORF2 protein
MVGGWLRRRRGRSRTADEAEQAAQQDGRRSRTTTARQQDDDDQQQDASGS
GASGSRSIYLRGPASLPQRPILRDRRSLIRPDGERSWTVVDYAGGHRRLP
NGILGLLCREHFPGLVEYAGVTGPAYTFDHYAVAPDAVDRDGREFNNKAE
RVKQELWDFFRCDAGYEARADVVATTSCKKLVVDMHYEARIQAIVTYHGS
VLGEKMIPHWCAAHPLCWEQMVDRWCSAEWDEAHNASRERRLMMQGPSHH
QGSRSLGQYAEAWGKATSDVTYNPDDGPEAYTNPAVYSRLHDYTAMAQEV
HGPDYDPSTEPIDPDVLMRVGGGKRHGRYWIADGAIDSSSTPTLSQVRAR
STGSSPAIRPRHDSSQHRIQQLETQLEEERRERQEMEARIWRSGGVSEDG
GDVPVHAEPWRRTGFRSATSIVPCS*

>gnl|PTREP|PTREP157 DNA transposon, TIR, CACTA, "DTC_Aron_consensus-1"; (TREP3401) transposase
MAGNYNYGGSGGFYRDWMYKRFDEVTGNLSAEYVAGVEEFMTFANSQPIV
QSCRGKFHCPCSVCKNEKHIISGRRVSSHLFSQGFMPDYYVWYKHGEELN
MDIGTSYTDRTYFSENHEEVGNVVEDPYVDMVNDAFNFNVGYDDNVGHDD
NYHHDGSYQNVEEPVRNHSNKFYDLLEGANNPLYDGCREGQSQLSLASRL
MHNKAEYNMSEKLVDSVCEMFTDFLPEGNQATTSHYQTEKLMRNLGLPYH
TIDVCKNNCMLFWKEDEKEDQCRFCGAQRWKPKDDRRRTKVPYSRMWYLP
IADRLKRMYQSHKTAAAMRWHAEHQSKEGEMNHPSDAAEWRYFQELHPRF
AEEPRNVYLGLCTDGFNPFGMSRNHSLWPVILTPYNLPPGMCMNTEYLFL
TILNSGPNHPRASLDVFLQPLIEELKELWCTGVDAYDVSLSQNFNLKAVL
LWTISDFPAYSMLSGWTTHGKLSCPVCMESTKSFYLPNGRKTCWFDCHRR
FLPHGHPSRRNKKDFLKGRDASSEYPPESLTGEQVYYERLASVNPPKTKD
VGGNGHEKKMRGYGKEHNWHKESILWELSYWKDLNLRHNIDVMHTEKNFL
DNIMNTLLGVKGKSKDNIMSRLDIEKYCSRPGLHIDSTGKAPFPPYTLTE
EAKQSLFQCVKHDVRFPDGYSSDLASCVDLENGKFSGMKSHDCHVFMERL
LPFIFAELLDRNVHLALSGTILTIFYGEIFLCNYLTSTYILGIGAFFRDL
CSRTLQTSRVQILKQNIVLIICNLEKIFPPSFFDVMEHLPIHLPYEAELG
GPVQYRWMYPFERFFKKLKGKAKNKRYAAGSIVESYINDEIAYFSEHYFA
DHIQTKSRFDEGEVPVYHVPGVPNIFMQVGRPSGAMHVEWLSEKDYQNAH
AYVLRN*IVQGPLNKVKTWPMYFTRGYLFHTQTHGAGRKTCNYGVCVKGE
NYADSSDEADFYGTLTDVIELEYEGIVNLRITLFKCKWYDPKIGRGTRRN
HGGVVDVLSTRKYNKYEPFILDQVCYIPYPYTKKPKNIWLSVLKVNPRGN
ISGQYENTDPTLLQTEDDEAVLQTTIEDLVIDYPVADVTPIILDYDIGDA
EPEDEFRCNLSSSDEDEIEDEDE*

>gnl|PTREP|PTREP158 DNA transposon, TIR, CACTA, "DTC_Balduin_consensus-1"; (TREP3412) transposase
MSDRAWMYTGHPSQKDMTDEWFIKTKEFVESAFSNGQEKTWCPCSRCENK
KKTEAVMGKHLQMSGFTPDYTVWTFHGESAQRNRVEVVRRRTDEYGTGIE
DMVQDFDDARDSDDEMEESAKAFYEMLESSKRPLHEHTELCQLDAIAQVM
ALKAQFNLGRECYDAMMTLFGRFLPKGHVMPANLYQSDKILRALKMPYEK
IHACEKGCALFRNEYADLNYCPICKSSRYVVVDNGMGEKRQTKIPVSVLR
YMPIVPRLQRLFMVEETARQMTWHKFGKRTELDADGNLMMVHTSDGDAWK
DFDGLHEDKAADPRNPRVGISTDGFNPFGMTATQYSCWPVFVIPLNLPPG
QIMQRKNIFLTLIIPGPNYPGKNMNVYMQPLKDELEEAWDNGVKTYDAAR
KENFKMHVWYMYSMHDLPAYALFVGWCVHGRFPCPQCKAALEFHWLQAGR
KYSCFDLHRQFLDPDHQFRKDKKNFIKGKVVKNSAPPALTGQQILDQLNA
LEPDPERPGYFKGYNSKHAWTHKPCFWDLPYFKDLLLPHNIDMMHTEKNI
AEALFGTLFGIDGKSKDNTKARVDQETLCDRPLQNMREPKGKQNWSKPKA
WFNLGRPAMREILLWVQKQLMFPDGYAANLKRGASLEKLKIFGLKSHDWH
IWLERVMPVMLRGFIPEDEWLVLAELSYFFRVLCAKELSPGVVEDMEELA
PELFCKLEKIFPPGFFNPMQHLILHLPTEARLGGPVQNRWCYATERMQKT
LRGKCKNKRRIEASMAEAFITEEAANFVTAHYEAKNHHLHNPKPRYNVGD
PKKGGSNLSLFKGKLAPAGVSQPISLDIEEWRTISLYIFNNLIEVRPYID
RYVVKFSYGAVIENDSVEEYELLAKTGGGYPGFISWFKQTSMDAELRQVA
NGFDYKVRSFEKYDINGYRFRTFGKELSMPDRKSKNFGVSAIGEGGIEYY
GRVEAIYELHFYGENPPNVVVFKCYWFEPNKTRRTHEHVGLVEINQNTHL
VVPDVYIMAQQATQVFYLPWACQTDENLEGWYVVYEVPPHVRPPPPNEED
YEPHINPDTYDGEFFQESRLSKNRFKNRYTSSQNMEVDSDNESYFIPEAE
QEELELEEVTDADDLSMLDRLQEGLSHVDAVEPDEPVIHYDMCDSDDDYA
FIDDTYRDY*

>gnl|PTREP|PTREP159 DNA transposon, TIR, CACTA, "DTC_Balduin_consensus-1"; (TREP3412) ORF2 protein
MVDPFAEEATGTPVQVPGVHGHSSHETPVEEQPRVEVHSAQE*PEETTVP
EASPDVERHGWEPWPDRTELPDWTEGPGGSGGGDGGDELTDSEGDVQVDG
ATVYKRGSTRLPVAPATREQRPVIKPEGDRGWVHPLGVRSPNTVLGVLCR
TNFPGFVTLPGEGQVPTLGFTWEHYQAAQAPPEEIIDGVLCHTRAEMTLY
RCEDGYEEEAARVLEVECRRLLQNLRHEARPQAIRYYYATRVFLISFIGV
ALKILSNNLQVPPRWCADKMDCWEALVDEWCTGSWRAIHENAKDRCSQMV
GVPHHQGSANLLQFGRNWMPHLYDLYGMAHTASYKKAKAFCESDLDDPSS
FTNISSHQKLVAYRDAGKATKGDDFNPSQEPLDPELVMISGGGRPHGSID
IGDGIIRCPLTLLEIKARQSSRCPEITPRLGPVELAIEVEWFFRLLFRKR
ERQSRLLLRKRDWQARLLFRLLLMRGTRPRHDCLRRRGPEMRRVSGPYTS
FLWYAFFSH*

>gnl|PTREP|PTREP160 DNA transposon, TIR, CACTA, "DTC_Baldur_consensus-1"; (TREP3418) transposase
MTSREWMYSGWTRGKAPTNEWIDNTTQFLNRAFSMQEVVKDGTIKCPCAQ
CRNYFRHKRDTIELHLCKYGYKENYGIWTSHGERPVINDNDPGPSLIDHE
GFGESDRMDNMLVDLASAQPPESSEEPAHYAKAFYRMVASADELIHENTT
HSCLSAVARLLAMKSQYNMSVAHYDDVLGIIHEFLPPESKLAKDFYRSKK
LLEGLGMPYVKIDVCYNNCMLYYKEDEHKEKCDFCGTSRYENGQNKTPRK
VLRYLPIKDRLQRLYAHEEIARLLQSHSRSQSGNMVHPCDGEAWQQFDED
FQDFAQDPRNVRLALATDGFTPYSLGAAPYSCWPVFITPLNFPPGVCMRP
EYTFLTLVIPGPEHPGKKLSVLMQPLVDELLKLWEGVETWDASRKQNFTM
RAIFLWSIHDFPAYGIFAGWSTHGRLACPICMGDSQSFQLRNGRKPCWFD
CHRRFLPNEHEFRTQLNAFRKNTFMLDEPPRILTGEEIKEEMYACVDDTE
NFGKTHHWTHISCFWQLPYFDKLKLRHNIDLMHNEKNVAESIWNTCFDIQ
DKTKDNVKARKDLAEICSRPLLQLVSKGNGKWHKPRASFCIDRNDKTTIL
KWFQELKFPDGYAANIRRGVNLLQRKIFGLKSHDYHVFMERLLPVAFRGF
IPESVWKCLAELSFFYRQLCAKELNKDTIRSLEENVAVLICKLEKIFPPG
FFNPMQHLIIHLPYEARLGGPVQFRWNYPYERFIQKLRKKVRNKARVEGS
IVEAYLVEETSNFLSLYFNPKVRSARNKMHRYDDGSSQFDSTCNLEIFQY
PGRCISPRGCRALTIEQYKAATLYILTNTPEMDDFFKYYDSNHLRHCLSF
NLQSTKTNTNICHLQCMKSSSIHNALRQMSYGFRSTVSTYGVYDINGYRF
RSEKYESKKSGLTTTNSGVCVSCVGENNDVLEYYGIIKDILKISWEGSMN
LELVLFDCYWFDPTSTGVRRTDNLGLVEIKHTSRLSTFEPFVMASQVTQV
YYLPYPCTTRRDLSEWWVVHHVNPRGYVQKVENTNNDSNPNDDQTQDVSF
YQEDGLEGTFIIDLGADLGNMTPPILDEITNAKDLEFLEKQTQAEDNYDE
DDNEEEEEEEEEEEEEEEEEENDEEDEGTQPPAYDPNDF*

>gnl|PTREP|PTREP161 DNA transposon, TIR, CACTA, "DTC_Baldur_consensus-1"; (TREP3418) ORF2 protein
MNSIHRKRLARQQQGRNISTRSNASATNAKNRVPEMINGGGSSNSGANSS
QRLCAGNSSNTDNASQATNISGSGMSSAPPNKRGRKKGSRTALKVPPRGR
KIALKPRGDEQFEYVTYPLLKSDPKYGTHMGIILKREYPGIIEEKDENGL
IISSRPATSWFDYYEKEDDSGVTKADKVKQEFWNAFCVSEADKVEADRVL
ENYAAKSVRQMMYQLRVDSVKVYHDKIGEQIDDALARPKELEVDEYKDGP
VDWCRDNGFSYLADYWCTEEFKAKRKRGQQARLNSEDVAQNRGGSRPFTE
TQQYMGVKFGPEKATTLNTFSAMKTGFKNIDNDGNIGPIPSQKAQKRVTD
YLTGLRAKYPDDWQQRDLDENVLYSTNGGLPHGRVQIANGAVRKANILAV
AKSTNVRPANSIAFQNMARQNEQLLRENQYMRKKQERTDKLLLALYEKLG
EQVPQELDCPVEEEDPFAQGTSSSHVVSQPVEDNGNNNSDGCNTASGNGG
NNNGDNNCNGNNTSSLNANDGSNIGGNNNSGGCNTSTS*

>gnl|PTREP|PTREP162 DNA transposon, TIR, CACTA, "DTC_Baron_consensus-1"; (TREP3402) transposase
MIVCPCKDCRNVERKSGSDVVDHLVRRGMDEAYKLRADWYHHGDVDSVAD
CESNFSRWNAEILELYQAAQGFDADLGEIAEDEDIREDEFLAKLADAEIP
LYPSCLNHSKLSAIVTLFRIKTKNGWSDKSFNELLGTLPEMLPADNVLHT
SLYEVKKFLRSFDMGYEKIHACVNDCCLFRKRYKNLENCPKCNASRWKSN
MQTGEAKKGVPQKVLRYFPIIPRFKRMFRSEEMAKDLRWHYSNKSTDGKL
RHPVDSVTWDKMNDKYPEFAIEERNLRLGLSTDGFNPFNMKNTRYSCWPV
LLVNYNLPPDLCMKKENIMLSLLIPGPQQPGNSIDVYLEPLIEDLNHLWK
KGELTYDAFSKTTFTLKAMLLWTISDFPAYGNLAGCKVKGKMGCPLCGKG
TDSMWLKYSRKHVFMCHRKGLAPTHSYRNKKAWFDGKIEHGRKARILTGR
EVSQTLKNFKNDFGNAKESGRKRKRNDCIESVTDSDDESSESEEDEELEV
DEDELSRWKKRSIFFKLSYWEVNDLPVRHNLDVMHVERNVGASIVSTLLH
CGKSKDGLNARKDLQDLGVRKDLHPNAQGKRTYLPAAPWSLSKSEKKTFC
KRLFEFKGPDGYCSNISRGVSLEDCKIMGLKSHDYHVLMQQLLPVALMGL
LPKGPRTAIIRLCSFFNHLCQRVIDIEVISVMEAEIVETLCMFERFFPPT
FFDIMVHLTVHLGREARLGGPVHFRWMYPFERYMKVLKDFVRNPARPEGC
IAESYLAEECMRFCSDFLKKTTSVEEKPERNTEYENNSILEGRPISAGTS
FMLTEVDKNIAHLAVIQNMAAFDPYVDMHLQYLQDTNPRCKRDASFLWNM
HAKNFASWIKEQANTIKWLAYGPRCSARSYSGYIVNGQRFHTRSLERQSQ
NSGVYYEATAMCRSSAKDTAQVVDLVSYYGTVTDIILLDYNVFYVPIFRC
QWAVRGNGVKVEDGFTLVNLNHSQVSFLKDPFILASQAKQVFYSRVDDSS
SWYVAMKGSSRRYSKEDAQEGNAEIGPLPADIDMDAEMDEAEYARSDCEG
IYVPNVDSYSFYESLFYALHALCLLLLFWFQISFLEV*

>gnl|PTREP|PTREP163 DNA transposon, TIR, CACTA, "DTC_Baron_consensus-1"; (TREP3402) ORF2 protein
MKNIAKDPTVREIVEYTIMGDPVGPGSVKLASYVGTLVREHVPITIETWK
DVSQDMKTVLWKSVQARFELDEEFQRVAVLKQMGSLWRSYKSRTVKDINL
APNNQQRMNLRPMNISPTEWRKFVKVKTSAAFKVVSEKYKERRRNQIPHT
TSRKGMVRLAEDMKLESGDPSEVTRLKVWVKSRTKKDGTPVNTNAAEKIV
KDHLSQLLGPDNPGRLRAMGRGMSKTKLACLQVKSKCMTDMEEKQVLLMK
KSVNRRTNPKCLLVNWSGPEDIIGEGRILSSDPDDVVNDCRLGPVDLKVL
VEAANTPDAFLWRPAPNMYTITEAVGQMIAWPASKCVLVEKDIEIEDIVP
LGLRGNSQNKCKLLDLSTDEVIVAEGRWQTQEQNALVNGLPLGPSAVKVF
VDKVLMPETFVWRPTMEMTYLEDCLKAFISWPVHKENMKCKLMDITGKKR
VVAEGRWATNDPKQKVHFVPLGDNVVKVWVDIVKVSDVKVWRPSDEVEIM
EDALGTAIAWPEDKVIMS*

>gnl|PTREP|PTREP164 DNA transposon, TIR, CACTA, "DTC_Calvin_consensus-1"; (TREP3420) transposase
MDRQWMYADRRSKEFIDGVHYFLRVAEANRQRGFICCPCNKCKNQKEYSA
SRTIHFHLFESGFMPSYNCWTSHGEQGVEMEEDEVEDDNIPDFAQYVGFE
GNQTGEEEIAADGNDVADDLGQMLQDAREDCESEKEAHKLDKMLEDHRTS
LYPGCEQGHKKLDTTLELLQWKAKNGVSDKAFGDLLKLVKNILPGGNKLP
ETTYEAKKIVCPLGLEVHKIHACPNDCILYRGEEYENLEACPVCKALRYK
IRRDDPGEVDGQLTKKRIPAKVMWYFPIIPRLRRLFRNKGNARMLRWHAE
ERQQDGMLRHPADGSQWRNIDRKFKEFGKDARNIRFGLSTDGMNPFGEMS
SGHSTWPVTMCIYNLPPWLCMKRKYIMMPIIIQGPKQPGNDIDVYLRPLV
EDLKQLWKKEGVPVWDEDKQEEFNLRALLFVTINDWPALSNLSGQSNKGY
KACTHCMDETESTYLKHCRKVVYMGHRRFLAANHPVRKKGKHFEHKADHR
TKPKHRSGKTVFAMVKDLKVVFGKGPGSQHIESEDGHAAMWKKNSIFWEL
PYWEFLDVRHAIDVMHLTKNLCVNLLGFLGVYGKSKDTLEARNDLKHMEQ
RGDLHPEPKEKGSHYLSPASYTLSKAEKESMFECLESIKVPSGYSTNIKR
IISTKEKKFTNLKSHDCHVLMTQLLPVVIRGILPDNVRATITKLCAFMNA
ISQKVIDPDRLEALQNEVVQCLVSFELIFPPSFFNIMTHLLCHLVKEIRI
LGPMYLHNMFPFERYMGVLKKYVRNRARPEASIAKGYGTEEVIEFCVEFI
EDLRPIGVPESRHEGRLRGKGTLGRKAIMTVDNNLFRKAHFTVLQHSSLV
APYIEEHLALVRARNIGKSDAWITRHHIDTFPAWLRQHLMGNESINQQLA
FLARGPSGSIATFQGYEINGYTFYTRAQDMKSTNQNSAVRVDAMGHDGTT
ATYYGAIEDIWELDYGPLKVPLFRCQWVRLTGGGVMIDDSGMTTVDLNKV
GYSDEPFVLANDVTQVFFVKDMSSKGKKGRGPDEPKRQVVLPGKRKIVGV
EDKTDEDYDQLDGQPPFTVTIDPSILLSNEDTPYSRSDHKEGTIVRRKYV
RSTVTADVMP*

>gnl|PTREP|PTREP165 DNA transposon, TIR, CACTA, "DTC_Calvin_consensus-1"; (TREP3420) ORF2 protein
MADRDEEQILYDTIAEGSSQYWNEEEGNEDPNQYLNEEGNVERDAEGNQQ
GHVERDVEGNQEEEASGSQPSVGQKRARGQRGAAKKLEGRHIITEVEEDG
RPSAPAEAAKNYVRHSGWVVRDNVPVSTVYWRRTRARGDHESFVPDSEKE
MLWTTMLETFTLPAGTEDKVKRWTLKKMAEQFQSFKGDLYQKYILKGQTP
NFDTFPKLRDHWDEFVAYKTGEQGQAMMERNKENAAKKKYHHHLGSGGYS
VAMPKWEQMEASLIERGIEPATANWPERSKFWYYAHGGTLNPADGSLVFG
DQIREAARRLTDAVEASSQGTFRPDRDRDELTLALQTPEHPGRTRGKGVI
PWKIGFKEDIHTYRSRMRSKRDTEAKIADLEFRVSSYELNMQEEVARKVD
ERMAAHRSHDPQPTIPPAMVSPSGNRSSCASTGQVGSQSMDAMQTQDEST
CPVDDITQRTPCELHIPFKNLSIKVASGMAIPTDPSGTYHCRPIPAGYSK
VEVELVEGAYEDLELDYPGGDGETHLRDTSHAIILWRRRYIILPGRQAAS
RAPSPPAPPSPPQDPAPSPPHAPPAPSPPQAPASTPPQDPAPTPPRAPTP
TPPQAPLPAPSKSRAPPAPPPAHTRATKKAKVDAAKNKDPGYDCTQEELD
AYVASEVKRQFKPRSPEKKIPIDPSVRNFFRGMSASVKEAIKLSDYERTL
KKASSGKSKPVPQLGEQPNQEIEPLVTGKEMTIEQFITDTGLTTDQLLGV
APIEKAEVKYMYELGKPLVKPELLQSLPTQMYKFHQLYMEMSATGREMIG
ARIRDTDFLQGDDILWINFKGIYELYQLDALDVSIMSCWILMEIQRARRR
RVFDTGFIDPRKVNVAMLDQYPQETEDNLVHLLKAQHYKTFILLPYNTEF
HWVLLLFDLEACTVNVYDSMDKKESTFDKVFELIDRAWYRFRHLVRGKWR
ERLRRKFKFPCAKQKQGTNLCGYYVCEYCHCLADQIITTRELDFIRMRDN
LTTHKEFIAAVQEQLMGFINEEILDPKGEFYYDGNTIHRSLASELAASTT
TSKS*

>gnl|PTREP|PTREP166 DNA transposon, TIR, CACTA, "DTC_Caspar_consensus-1"; (TREP3413) transposase
MSHPWMYGDRRTTAYREGVHSFRDAADANKHGGGYMFCPCVECRNEKDYT
SSRVIQSHLLRSGFMSGYNVWTKHGERGVMMEDDDEEEENDDDNYRSMFP
EYADTAMEDNEEEDQDEEREPDEPADDLGRVISDARRGCDTEKERLQFEQ
MLQDHNKLLYPTCEDGQKKLGSTLELLKWKAETGVTDSSFEKLLVLMKKM
LPRKNELPASTYEAKKLVCPLGLDVQKIHACPNDCILYRGEKYENMDKCP
VCTALRYKIRKDDPGDIEGEPPRKRVPAKVMWYAPIIPRLKRLFRNKDHA
KLLRWHMEDRMKDDKLRHTADGLQWRKIETEFPRFAADARNLWLGLSTDG
MNPFGEQSCSHSTWPVTLCIYNLPPWLCMKRKFIMMPVLIQGPKQPGNDI
DVYLRPLVDELLQLWAEPGVRVWDEHKQEEFDLRALLFVTINDWPALSNI
SGQSNKGYNACTHCLDQTESIYLDKCRKNVYPYNRRFLPPKHPLKKKGKH
FNGKAEPRGKPVIRTGAEVFDMVKDLKVIFGKGPGSQPVPNGPDKRVPMW
KKKSIFWELPYWEVHEVRSVIDVMHLTKNLCVNILGFLGLYGKSKDTPEA
REDQERHKGRDGMHPGQFQGRASYALTKEEKEIFFEVLFSIKVPTGFSSN
IKGIVNMKDKKFQNLKSHDCHVLMTQLLPVALRGILPENVRLAIVKVCAF
LNAISQKVIDRESLSGLQIDVVQCLVSFELLFPPSFFNIMTHLLVHLVEE
IRILGPVFLHNMFPFERFMGVLKKYVRNRARPEGSISKGYGTEDVIEFCV
DFLPDLKPIGVPESRYEGRLTGKGTLGRKAKVCMDGHSFSQAHYTVLHNS
TVVAPYIVRHKNILRSENPGKADSWIKGEHEKTFGSWLQTHLMNDDTVGD
ELYCLARPPSSTICTFQGYEINGNTFYTVAQDKKSTNQNSGVRFDATDEN
GHCLETYYGYIEEIWELDYGPTFKIPLFRCKWVKLTGGGVVVDQKYGMTT
VDLNNLAYMDEPFVLANDVAQVFYVKDMSTKTRKRNQQKKISSDEPKRHI
VLSGKRNIVGVDDKTDMSEDYNKFHEIPPFKVKTDPSILLNDEDSPWLRP
RRKQK*

>gnl|PTREP|PTREP167 DNA transposon, TIR, CACTA, "DTC_Caspar_consensus-1"; (TREP3413) ORF2 protein
MDPHIRNLEEEELLEDIIKDGPDVEPAESPSSYLNPSGYGMEVERHEDEA
DGAGDRSNDGEGDSSTDGEAGEEIIKSGEVYIASTSSKATKRGPTRKLDA
RTHYTFEVILPTGEPKLPKNAADTFKKQCGVLVRDHVPISVREWNKRKGA
ADSDYVAERYKDNLWNDLMSHFNLPECENEDAADKLRAKVKQWTLKKMAE
LFRSWKKKLWKNYLKTKKVPVFEGYLAKQANHWKEFQEYKESEDAQALSE
KNKINADKKKYHHKLGPGGYETAIPKWDKKEQDLLDKGIVPEPLRDEWEL
RARNWFLAHGGSYDEKTGDLICSDGLRIPRENWKRIVKEIKEGKRKFTAD
REKDLLTLVLGNDEYGGRTRGFGPSYPWWLGFARDQDTYRSRERAKKRQQ
DEENDKFNQLLARINEQQKQIDELRGVARQEDPALDITGAPSKRKSSVAE
SEAPPDDARRMIEGGPGYPVDGIKESTSCELHQKFKNISMKVAVGQALPS
GPDARWHGREIPAGFAKVGVDEIMTVFHDMELDIAGPEDERTLGEVLGGV
ILWDKNYIKLPGSAPRTTPPPSRRRSPTPPLPPSPPHDVGQHSTSPSRSP
PPDLGRPSPPPPAPDTKPEPATDTKRERATKNAPPPPAPDTKPEPATDTK
RERATKNAPPPPLRIQGQHNTSPSRSPPPDLGHPSPPPPAPDTKRERATK
NAPPTIPKRRSPPKRKRSPLPKVRHANLPIRPYDRTPEENARIAKEHHDA
QMKKKEPEPRPEYTEKQIAFAKYFTTLPSQYDLHHKPDDYTRTLQKEVKK
SRSRASASGSKSSSTTSKKKSDVPQLGQQAKQSIPPLKVLTENVPPTVQG
QAFEIAKEWAAECGVSVEDLLASQDDRIPKAVVAPKPQFVMGEPLVSKDD
LPTNMRYLHQWYLSESKNGRTMIVVSVPREYYGRPEQIHIDFDELFQMYN
GDALDKSLMSCYCLCRMKILDCKSKNILNIGFIDPDKIHIVTLTDKPKET
EENLLRFLTDQNFCDHILFPYNFRFHWILLDIQIDKGRVDAFDPLSRINE
KLSKSLSLSGRVWKRFKCVTPGNFPEKLTFRAAQVSHLCGYYVCETIRTF
TSEHKDHRFDVSNEHSHLYFYPSFFVIMIDIHIHLLFLYSTRP*

>gnl|PTREP|PTREP168 DNA transposon, TIR, CACTA, "DTC_Chester_consensus-1"; (TREP3403) transposase
MVICPCSDCRNVDRHLGSVVVDHLVRKGMDEAYKKRMDWYHHGEIISGDA
EDNTVNECNEEILELYRAAECLDDELADDVEGEAEDKKEDEFLAKLADAE
TPLYPSCANHSKLSAIVSLYRIKTQNGWSDKSFNDLLETLPKMLPADNVL
HTSMYDVKKFLKSFDMGYEKIHACINDCCLFRKKFKKLDACPKCKASGWK
QNMHTGQIKRGVPQKVLRYFPIIPRLKRMFRSEVQAKELRWHSTNKSSDG
KLRYPVDSVTWEQVNAKYPAFAPEERNIRLGLSTDGFNPFNMKNSTYSCW
PVLLVNYNMAPDLCMKKENIMLTLLIPGPQQPGNSIDVYLEPLIEDLIHL
WNEGEVTYDAFSKSTFNLKAMLLWTISDFPAYGNLAGCNVKGKMGCPLCG
KNTDSMWLPNCRKHVYMSHRKGLPSNHSYQSKKSWFDGKAEHGRKGRILT
GRNISIMLRNFKNDFGNMKEKGKKRVRTGSVIETSSISESEDSESDEEEE
VELDEEELSRWKRRSIFFKLPYWEVYLPVRHNLDVMHVERNVCASIVATL
LHCGKSKDGLKTRKDLQLLGIRKGLHPTERGKRIYLPPAPWSLSKQEKKV
FCKRLYDFKGPDGYCSNISTCISLAECKVMGLKSHDYHVLMQQLLQVAVR
GLLPKGPRIAIIRLSAFFNKLCQRVIDMEQITVLETEIVETLCMFERFFP
PSFFDIMVHLCVHLGREARLGGPVHFKWMYPFERYMKVMKDYVRNPARPE
GCIAESYLADECMEFCRAFLRKSTSVEEKKVRNIEYENNSILEGRPISAG
TSLILTDSEKKIAHLAVIQNTAMFDPYVDMHLEFLQNSNVRCRRDASVLW
STHTHNFADWLKKQHEDVLKWLAYGPRNIARSYSGYIVNGLRFHTDKVDR
LSQNSGVFYEATAMCRSSVKDTSQVADWVTYYGRVTDIILLDYNIFYVPI
FRCQWAVRGNGVKVEDGFTLVNLFQSQVSFARDPFILASQAKQIFYSRED
DSSN*FVVMRGSSRRYNEEGEELGDVGPLPSVVDMTIEDQNDESQNARSD
SEGIYV*

>gnl|PTREP|PTREP169 DNA transposon, TIR, CACTA, "DTC_Chester_consensus-1"; (TREP3403) ORF2 protein
MKDIAKDPNSRIRVDFTDLGEPCGPGSVKLSSYIGSLVREHVPVTIEDWR
KIGEERRTVLWKSVQVRFELDGEYEKGAVIKNMGCLWRSYKSRLVRDVNN
AANNAERMKLRPKNISIAEWRKFVKLKTSPEFQVLSEQYKERRRSQIPHT
CSRKEMVRLAEELKQESSEPFEVTRLKLWVKSRTKKDGTAVNTLAAETIV
*DLLTQVLGPDKPGRL*AMGRGMSMSKLACFQVKNKHMAEMQKNQYQLQK
QSVKNRSKPRCVLHDWAGGDDIVAEGILLSSDRNDYLDNTPLGPGAYKVL
VETAFKPEASLWRPVPKMFTIGEAVETVIAWSQNCTIVLDDEMTADDSVP
KSPSTDSVNKCRLLD*CKDEEIVAEGRWQTKDRHALVNGLPIGQRAVKIF
IDQVLEPETFLWRPTLDLSTLDDCLKSFVAWPVNRENQKCMLMDITGLKR
VVAEGRWSSNDPDMKVHYKPLGPNGVRVWVDVVRENDAEVWRPSDAVECM
EDALGTTVAWPVDKVVLV*

>gnl|PTREP|PTREP170 DNA transposon, TIR, CACTA, "DTC_Clifford_consensus-1"; (TREP3414) transposase
MNRQWMYGDRHTREYIKGVHEFLDAAEANKQNGFMCCPCTECGNTRSYSN
RKVLHSHLLYKGFMPHYNVWTRHREIGVMMEDGEEDYDDNYVPPEYGDAA
TGGAGEDEEEPDDVPNDAATGEAAEDQEEPTMCPDDDDLRRVIVDARTQC
ESQKEKLKFDHMLEDHKKRVYPNCEDGNTKLGTVLELLQ*KAENAVPDKG
FEKLLKILKKKLSKDNELPDSTYATKKVVCPLGLEVEKIHTCPNDCNLYR
GAYKDLNACPVCGALRYKIRRDDPGDVDDEPPRKRVPAKVMWYAPIIPRL
KRLFRNEEHAKLMRWHSENRKKDGKLRAPADGSQWRKIERKYWDEFAEDP
RNVWFALSADGINPFGEQSSNHSTWPVTLCMYNLPPWMCMKRKFIMMPVL
IQGPKQPGNEIDVYLRPLVEELLQLWNENGVRTWDEHRQEEFNLKSLLFV
TINDWPALSNLSGQTNKGYHACTHCLDDTESIYLDKCRKNVYLGHRRFLP
TNHQCEKGKHFKGEADHRKKPAMRTGDDVLAMVNDLHYVIFGKGPGGLAV
PNDAEGHAPMWKKKSIFWDLPYWKDLEVRSSIDVMHVTKNLCVNLLGFLG
VYGKTKDTPEAREDLQRLHEKDGMPPKQYEGPASYALTKEEKEIFFECLL
SMKVTTGFSSNIKGIINMPEKKFQNLKSHDCHVIMTQLLPVALRGLLPEN
VRLAIVKLCAFLNAISQKVIDPEIIPRLRSDVAQCLVSFELVFPPSFFNI
MTHVLVHLVDEISSWPVFLHNMFPFERFMGVLKKYVRNRARPEGSIYLPK
SRYEGRLTGKGTLGRDSIICRDGYSWSQAHYTVLQNSTLVTPYVDEHKNS
LRSKHPEQCDDWITCEHIRTFSSWLETRLRGDNTVCDELYLLSRGPSLTV
LTYKGYEINGNTFYTIPDQKSTNQNSGVRFDAATESGKDTYYGYIVDIWE
LDYGPDFKVPLFKCKWVNLLGGGVQVDPQYGMTTVDLKNLGYTDEPFVLA
NDVAQVIYVKDMSTKPRKEDKEANTSYDEPKRHIVLSGKRDILGVEARQT
CLKIMKSFMKFLPSMSRLTQAS*

>gnl|PTREP|PTREP171 DNA transposon, TIR, CACTA, "DTC_Clifford_consensus-1"; (TREP3414) ORF2 protein
MDTPRDEAKEALLGDIIAEGSDAVSLFLNDTDGLEGEGYDSGYGDLMPVQ
EGDHEDGSGDPMPVQEGDRDDGSGDRTSTTSVKRRGPKKKLSSDERFEII
AIAPDGQPIEPIRTKNAFVAQCGVLVRDKIPISIQQWFKPATEDPEVSYV
NDMQKNDLWTELKSNFTLPPEDDPEKPVKEQLIKSFALKRMAELFRRWKK
ELNKFVENNETPEFKGRYEKIRDHWPAFVAHKTSEKSKKMSATNKQNAAK
KKLHHRTGSGGYLVARPKWAKAENDLVDKGIEPETISWPDRCRTWFFGAG
GTLDPVTGKCIWTDDQMDIPVRKLKQYIEAAQQGTFFPDRENDELTMALG
NPEHPGRTRGTPGSIPWKVGFPDAGGYKCHERRKKVEQTQLQALHARVDA
IEEREANRSKRTAEASPEATPPSQRRSSVASTELLQPEHVLTAPASYPVD
AITESQNCHLMTQWMNLKVKAAVGSVFPTEPGATFHCRPIPEGYARVMVD
EITEGFEDLQLDHPTGEGETRLGSALKTPCLWRKELINLPNWTPPPPPPP
PASQGTPPPPPPPPPASDDQGPRPAPSPARGGTPPAPARPSSQPPPSPPR
QQGRKRPAAAPAAPARRSPSPPPRKQVKKTAASSARPASSSTARGGRTYR
FGPSLKSPEKLPYERTPEENAKIARTEVDDWFQGLKAKRHPPPEEKVDPV
KVKRTLAALAKPPKSPPKGNYERIIAKTFAEAERSGSTVSDQRLKERRAG
KQIAQLGEQAKQSCPPLKVPSDIVDPRMVPGYGNLDDYLPDDVHYDFMEV
QIH