| total TREP
| |
|
|
|
|
|
|
| DNA transposons |
|
| Accession |
Classification |
Family name |
Size |
Comment |
Organism |
Submitted by |
| TREP3300
| DNA transposon, Helitron, Helitron |
DHH_Hector_AY642926-1 |
23270 |
fragment |
Hordeum vulgare |
Thomas Wicker |
| TREP3000
| DNA transposon, Helitron, Helitron |
DHH_Helios_42j2-1 |
4520 |
fragment |
Triticum aestivum |
Thomas Wicker |
| TREP3001
| DNA transposon, Helitron, Helitron |
DHH_Helios_AF521177-1 |
22223 |
fragment |
Hordeum vulgare |
Thomas Wicker |
| TREP3301
| DNA transposon, Helitron, Helitron |
DHH_Paddington_consensus-1 |
17472 |
consensus sequence |
Oryza sativa |
Thomas Wicker |
| TREP3302
| DNA transposon, Helitron, Helitron |
DHH_Paddington_OSTIGR5-101 |
16457 |
complete element |
Oryza sativa |
Thomas Wicker |
| TREP3303
| DNA transposon, Helitron, Helitron |
DHH_Paddington_OSTIGR5-102 |
17565 |
complete element |
Oryza sativa |
Thomas Wicker |
| TREP3304
| DNA transposon, Helitron, Helitron |
DHH_Paddington_OSTIGR5-103 |
17532 |
complete element |
Oryza sativa |
Thomas Wicker |
| TREP3305
| DNA transposon, Helitron, Helitron |
DHH_Paddington_OSTIGR5-104 |
13901 |
complete element |
Oryza sativa |
Thomas Wicker |
| TREP3306
| DNA transposon, Helitron, Helitron |
DHH_Paddington_OSTIGR5-105 |
13231 |
complete element |
Oryza sativa |
Thomas Wicker |
| TREP3307
| DNA transposon, Helitron, Helitron |
DHH_Paddington_OSTIGR5-106 |
16539 |
complete element |
Oryza sativa |
Thomas Wicker |
| TREP3308
| DNA transposon, Helitron, Helitron |
DHH_Paddington_OSTIGR5-107 |
17813 |
complete element |
Oryza sativa |
Thomas Wicker |
| TREP3002
| DNA transposon, TIR, HAT |
DTA_Aurec_58l25-1 |
4214 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP3003
| DNA transposon, TIR, HAT |
DTA_Harper_M801L24-1 |
4557 |
complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP718
| DNA transposon, TIR, HAT |
DTA_unnamed_AF427791-1 |
710 |
putative, fragment of CDS |
Hordeum vulgare |
Thomas Wicker |
| TREP3435
| DNA transposon, TIR, CACTA |
DTC_Alfred_consensus-1 |
8351 |
consensus sequence |
Zea mays |
Thomas Wicker |
| TREP3400
| DNA transposon, TIR, CACTA |
DTC_Aron_B_consensus-1 |
8556 |
consensus sequence |
Arabidopsis thaliana |
Thomas Wicker |
| TREP3401
| DNA transposon, TIR, CACTA |
DTC_Aron_consensus-1 |
8721 |
consensus sequence |
Arabidopsis thaliana |
Thomas Wicker |
| TREP773
| DNA transposon, TIR, CACTA |
DTC_Balduin_AY146588-1 |
9841 |
complete element, (3 bp TSD) |
Triticum monococcum |
Thomas Wicker |
| TREP797
| DNA transposon, TIR, CACTA |
DTC_Balduin_AY146588-2 |
4729 |
fragment of 3' region |
Triticum monococcum |
Thomas Wicker |
| TREP2063
| DNA transposon, TIR, CACTA |
DTC_Balduin_AY853252-1 |
10037 |
3' truncated |
Hordeum vulgare |
Marion Roeder |
| TREP760
| DNA transposon, TIR, CACTA |
DTC_Balduin_BJ218039-1 |
554 |
fragment of terminal repeat |
Triticum aestivum |
Thomas Wicker |
| TREP755
| DNA transposon, TIR, CACTA |
DTC_Balduin_BQ469151-1 |
376 |
fragment of terminal repeat |
Hordeum vulgare |
Thomas Wicker |
| TREP756
| DNA transposon, TIR, CACTA |
DTC_Balduin_BQ661452-1 |
376 |
fragment of terminal repeat |
Hordeum vulgare |
Thomas Wicker |
| TREP3412
| DNA transposon, TIR, CACTA |
DTC_Balduin_consensus-1 |
11744 |
consensus sequence |
Triticeae |
Thomas Wicker |
| TREP124
| DNA transposon, TIR, CACTA |
DTC_Balduin_EF067844-1 |
9600 |
complete element |
Hordeum vulgare |
Takao Komatsuda |
| TREP125
| DNA transposon, TIR, CACTA |
DTC_Balduin_EF067844-2 |
11734 |
complete element |
Hordeum vulgare |
Takao Komatsuda |
| TREP126
| DNA transposon, TIR, CACTA |
DTC_Balduin_EF067844-3 |
10132 |
complete element |
Hordeum vulgare |
Takao Komatsuda |
| TREP3418
| DNA transposon, TIR, CACTA |
DTC_Baldur_consensus-1 |
8955 |
consensus sequence |
Oryza sativa |
Thomas Wicker |
| TREP3402
| DNA transposon, TIR, CACTA |
DTC_Baron_consensus-1 |
8479 |
consensus sequence |
Arabidopsis thaliana |
Thomas Wicker |
| TREP3419
| DNA transposon, TIR, CACTA |
DTC_Benito_consensus-1 |
4256 |
consensus sequence |
Oryza sativa |
Thomas Wicker |
| TREP3004
| DNA transposon, TIR, CACTA |
DTC_Boris_42j2-2 |
14742 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP2222
| DNA transposon, TIR, CACTA |
DTC_Boris_464G14-2 |
4242 |
fragment |
Triticum aestivum |
Silvie Cloutier |
| TREP3005
| DNA transposon, TIR, CACTA |
DTC_Boris_59e04-1 |
8015 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP3006
| DNA transposon, TIR, CACTA |
DTC_Byron_42j2-1 |
4691 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP3007
| DNA transposon, TIR, CACTA |
DTC_Byron_42j2-2 |
2841 |
5'fragment |
Triticum aestivum |
Thomas Wicker |
| TREP3008
| DNA transposon, TIR, CACTA |
DTC_Byron_42j2-3 |
4260 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP781
| DNA transposon, TIR, CACTA |
DTC_Byron_AY146587-2 |
5096 |
complete element, (3 bp TSD) |
Triticum durum |
Thomas Wicker |
| TREP3420
| DNA transposon, TIR, CACTA |
DTC_Calvin_consensus-1 |
10759 |
consensus sequence |
Oryza sativa |
Thomas Wicker |
| TREP3510
| DNA transposon, TIR, CACTA |
DTC_Cameron_DQ885753-1 |
1218 |
complete element |
Triticeae |
David Laurie |
| TREP3421
| DNA transposon, TIR, CACTA |
DTC_Carson_consensus-1 |
1282 |
consensus sequence |
Oryza sativa |
Thomas Wicker |
| TREP1704
| DNA transposon, TIR, CACTA |
DTC_Caspar_1020F19-1 |
12029 |
complete element (3 bp TSD) |
Triticum aestivum |
Thomas Wicker |
| TREP2248
| DNA transposon, TIR, CACTA |
DTC_Caspar_103H9-1 |
1300 |
truncated |
Triticum durum |
Thomas Wicker |
| TREP1225
| DNA transposon, TIR, CACTA |
DTC_Caspar_231A16-1 |
7044 |
complete element |
Triticum monococcum |
|
| TREP3010
| DNA transposon, TIR, CACTA |
DTC_Caspar_42j2-1 |
1279 |
fragment |
Triticum aestivum |
Thomas Wicker |
| TREP3009
| DNA transposon, TIR, CACTA |
DTC_Caspar_42j2-12 |
11342 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP3011
| DNA transposon, TIR, CACTA |
DTC_Caspar_42j2-6 |
2260 |
fragment |
Triticum aestivum |
Thomas Wicker |
| TREP2204
| DNA transposon, TIR, CACTA |
DTC_Caspar_464G14-2 |
559 |
3'fragment |
Triticum aestivum |
Silvie Cloutier |
| TREP2206
| DNA transposon, TIR, CACTA |
DTC_Caspar_464G14-4 |
134 |
fragment |
Triticum aestivum |
Silvie Cloutier |
| TREP3012
| DNA transposon, TIR, CACTA |
DTC_Caspar_59e04-2 |
6092 |
fragment |
Triticum aestivum |
Thomas Wicker |
| TREP772
| DNA transposon, TIR, CACTA |
DTC_Caspar_AF325197-1 |
1483 |
fragment of 5' region |
Triticum aestivum |
Thomas Wicker |
| TREP1303
| DNA transposon, TIR, CACTA |
DTC_Caspar_AF459088-2 |
11707 |
complete element |
Triticum monococcum |
Jorge Dubcovsky |
| TREP1304
| DNA transposon, TIR, CACTA |
DTC_Caspar_AF459088-3 |
11359 |
complete element |
Triticum monococcum |
Jorge Dubcovsky |
| TREP787
| DNA transposon, TIR, CACTA |
DTC_Caspar_AF521177-1 |
9105 |
complete element, (3 bp TSD) |
Hordeum vulgare |
Thomas Wicker |
| TREP758
| DNA transposon, TIR, CACTA |
DTC_Caspar_AL816166-1 |
284 |
fragment of 5' region |
Triticum aestivum |
Thomas Wicker |
| TREP759
| DNA transposon, TIR, CACTA |
DTC_Caspar_AL816390-1 |
341 |
fragment of terminal repeat |
Triticum aestivum |
Thomas Wicker |
| TREP775
| DNA transposon, TIR, CACTA |
DTC_Caspar_AY146588-1 |
9913 |
complete element, (3 bp TSD) |
Triticum monococcum |
Thomas Wicker |
| TREP1636
| DNA transposon, TIR, CACTA |
DTC_Caspar_AY643844-2 |
12091 |
complete element (3 bp TSD) |
Hordeum vulgare |
Katherine Caldwell |
| TREP1511
| DNA transposon, TIR, CACTA |
DTC_Caspar_AY661558-1 |
11430 |
complete element (3 bp TSD) |
Hordeum vulgare |
Thomas Wicker |
| TREP1509
| DNA transposon, TIR, CACTA |
DTC_Caspar_AY661558-10 |
387 |
fragment |
Hordeum vulgare |
Thomas Wicker |
| TREP1512
| DNA transposon, TIR, CACTA |
DTC_Caspar_AY661558-2 |
4539 |
5'fragment |
Hordeum vulgare |
Thomas Wicker |
| TREP1514
| DNA transposon, TIR, CACTA |
DTC_Caspar_AY661558-4 |
11435 |
complete element (3 bp TSD) |
Hordeum vulgare |
Thomas Wicker |
| TREP1515
| DNA transposon, TIR, CACTA |
DTC_Caspar_AY661558-5 |
11633 |
complete element (3 bp TSD) |
Hordeum vulgare |
Thomas Wicker |
| TREP1516
| DNA transposon, TIR, CACTA |
DTC_Caspar_AY661558-6 |
9360 |
5'fragment |
Hordeum vulgare |
Thomas Wicker |
| TREP1517
| DNA transposon, TIR, CACTA |
DTC_Caspar_AY661558-7 |
5100 |
5'fragment |
Hordeum vulgare |
Thomas Wicker |
| TREP1518
| DNA transposon, TIR, CACTA |
DTC_Caspar_AY661558-8 |
2498 |
fragment |
Hordeum vulgare |
Thomas Wicker |
| TREP2004
| DNA transposon, TIR, CACTA |
DTC_Caspar_AY853252-1 |
3849 |
3' end |
Hordeum vulgare |
Marion Roeder |
| TREP2007
| DNA transposon, TIR, CACTA |
DTC_Caspar_AY853252-4 |
321 |
5' end |
Hordeum vulgare |
Marion Roeder |
| TREP2008
| DNA transposon, TIR, CACTA |
DTC_Caspar_AY853252-5 |
844 |
5'fragment |
Hordeum vulgare |
Marion Roeder |
| TREP2009
| DNA transposon, TIR, CACTA |
DTC_Caspar_AY853252-6 |
848 |
5'fragment |
Hordeum vulgare |
Marion Roeder |
| TREP3413
| DNA transposon, TIR, CACTA |
DTC_Caspar_consensus-1 |
11568 |
consensus sequence |
Triticeae |
Thomas Wicker |
| TREP2246
| DNA transposon, TIR, CACTA |
DTC_Caspar_EF067844-5 |
995 |
truncated |
Hordeum vulgare |
Takao Komatsuda |
| TREP788
| DNA transposon, TIR, CACTA |
DTC_Caspar_TREP788-1 |
11627 |
complete element |
Hordeum vulgare |
|
| TREP3403
| DNA transposon, TIR, CACTA |
DTC_Chester_consensus-1 |
8216 |
consensus sequence |
Arabidopsis thaliana |
Thomas Wicker |
| TREP2250
| DNA transposon, TIR, CACTA |
DTC_Clifford_103H9-3 |
284 |
truncated |
Triticum durum |
Thomas Wicker |
| TREP1801
| DNA transposon, TIR, CACTA |
DTC_Clifford_294D11-1 |
11475 |
5'fragment |
Triticum durum |
Thomas Wicker |
| TREP1802
| DNA transposon, TIR, CACTA |
DTC_Clifford_294D11-2 |
12732 |
complete element (3 bp TSD) |
Triticum durum |
Thomas Wicker |
| TREP3013
| DNA transposon, TIR, CACTA |
DTC_Clifford_42j2-7 |
3429 |
fragment |
Triticum aestivum |
Thomas Wicker |
| TREP3014
| DNA transposon, TIR, CACTA |
DTC_Clifford_59e04-1 |
7662 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP3015
| DNA transposon, TIR, CACTA |
DTC_Clifford_59e04-3 |
2900 |
3'fragment |
Triticum aestivum |
Thomas Wicker |
| TREP774
| DNA transposon, TIR, CACTA |
DTC_Clifford_AY146588-1 |
12637 |
complete element, (3 bp TSD) |
Triticum monococcum |
Thomas Wicker |
| TREP776
| DNA transposon, TIR, CACTA |
DTC_Clifford_AY146588-1 |
12664 |
complete element, (3 bp TSD) |
Triticum monococcum |
Thomas Wicker |
| TREP2065
| DNA transposon, TIR, CACTA |
DTC_Clifford_AY853252-12 |
11370 |
complete element (3 bp TSD) |
Hordeum vulgare |
Marion Roeder |
| TREP2066
| DNA transposon, TIR, CACTA |
DTC_Clifford_AY853252-13 |
1804 |
3' fragment |
Hordeum vulgare |
Marion Roeder |
| TREP2067
| DNA transposon, TIR, CACTA |
DTC_Clifford_AY853252-14 |
2654 |
5' fragment |
Hordeum vulgare |
Marion Roeder |
| TREP3414
| DNA transposon, TIR, CACTA |
DTC_Clifford_consensus-1 |
11318 |
consensus sequence |
Triticeae |
Thomas Wicker |
| TREP2244
| DNA transposon, TIR, CACTA |
DTC_Clifford_EF067844-3 |
2767 |
5' truncated |
Hordeum vulgare |
Takao Komatsuda |
| TREP770
| DNA transposon, TIR, CACTA |
DTC_Clifford_TREP770-1 |
8334 |
Ends are truncated |
Triticum tauschii |
|
| TREP771
| DNA transposon, TIR, CACTA |
DTC_Clifford_TREP771-1 |
3296 |
fragment of 3' region |
Triticum tauschii |
|
| TREP752
| DNA transposon, TIR, CACTA |
DTC_Clifford_X63357-1 |
569 |
fragment of 3' region |
Hordeum vulgare |
Thomas Wicker |
| TREP3415
| DNA transposon, TIR, CACTA |
DTC_Conan_consensus-1 |
11735 |
consensus sequence |
Triticeae |
Thomas Wicker |
| TREP2069
| DNA transposon, TIR, CACTA |
DTC_Dagobert_AY853252-1 |
7864 |
complete element (3 bp TSD) |
Hordeum vulgare |
Marion Roeder |
| TREP3404
| DNA transposon, TIR, CACTA |
DTC_Dario_consensus-1 |
8969 |
consensus sequence |
Arabidopsis thaliana |
Thomas Wicker |
| TREP748
| DNA transposon, TIR, CACTA |
DTC_Donald_AF427791-1 |
12590 |
complete element, (3 bp TSD) |
Hordeum vulgare |
Thomas Wicker |
| TREP749
| DNA transposon, TIR, CACTA |
DTC_Donald_AF474072-1 |
10540 |
complete element, (3 bp TSD) |
Hordeum vulgare |
Thomas Wicker |
| TREP750
| DNA transposon, TIR, CACTA |
DTC_Donald_AF474373-1 |
12446 |
complete element, (3 bp TSD) |
Hordeum vulgare |
Thomas Wicker |
| TREP751
| DNA transposon, TIR, CACTA |
DTC_Donald_AF474373-2 |
7376 |
complete element, (3 bp TSD) |
Hordeum vulgare |
Thomas Wicker |
| TREP1510
| DNA transposon, TIR, CACTA |
DTC_Donald_AY661558-11 |
10878 |
3' fragment 14 bp truncated? |
Hordeum vulgare |
Thomas Wicker |
| TREP1513
| DNA transposon, TIR, CACTA |
DTC_Donald_AY661558-3 |
9497 |
3'fragment, 14 bp truncated? |
Hordeum vulgare |
Thomas Wicker |
| TREP2064
| DNA transposon, TIR, CACTA |
DTC_Donald_AY853252-11 |
8296 |
complete element (3 bp TSD) |
Hordeum vulgare |
Marion Roeder |
| TREP2055
| DNA transposon, TIR, CACTA |
DTC_Donald_AY853252-15 |
3200 |
fragment |
Hordeum vulgare |
Marion Roeder |
| TREP2005
| DNA transposon, TIR, CACTA |
DTC_Donald_AY853252-2 |
11944 |
complete element (no TSD) |
Hordeum vulgare |
Marion Roeder |
| TREP2006
| DNA transposon, TIR, CACTA |
DTC_Donald_AY853252-3 |
7220 |
complete element (3 bp TSD) |
Hordeum vulgare |
Marion Roeder |
| TREP2010
| DNA transposon, TIR, CACTA |
DTC_Donald_AY853252-7 |
2861 |
fragment |
Hordeum vulgare |
Marion Roeder |
| TREP2011
| DNA transposon, TIR, CACTA |
DTC_Donald_AY853252-8 |
2453 |
fragment |
Hordeum vulgare |
Marion Roeder |
| TREP3016
| DNA transposon, TIR, CACTA |
DTC_Donald_consensus-1 |
14374 |
consensus sequence |
Triticeae |
Thomas Wicker |
| TREP3017
| DNA transposon, TIR, CACTA |
DTC_Donald_M801L24-1 |
10485 |
complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP3436
| DNA transposon, TIR, CACTA |
DTC_DOPPIA_consensus-1 |
9537 |
consensus sequence |
Zea mays |
Thomas Wicker |
| TREP3422
| DNA transposon, TIR, CACTA |
DTC_Dorian_consensus-1 |
9874 |
consensus sequence |
Oryza sativa |
Thomas Wicker |
| TREP2247
| DNA transposon, TIR, CACTA |
DTC_Eddy_EF067844-6 |
997 |
truncated |
Hordeum vulgare |
Takao Komatsuda |
| TREP769
| DNA transposon, TIR, CACTA |
DTC_Eddy_Z66528-1 |
331 |
fragment of terminal repeat |
Hordeum vulgare |
Thomas Wicker |
| TREP3405
| DNA transposon, TIR, CACTA |
DTC_Eloy_consensus-1 |
4234 |
consensus sequence, non-autonomous |
Arabidopsis thaliana |
Thomas Wicker |
| TREP3437
| DNA transposon, TIR, CACTA |
DTC_En1_consensus-1 |
8287 |
consensus sequence |
Zea mays |
Thomas Wicker |
| TREP778
| DNA transposon, TIR, CACTA |
DTC_Enac_AY146588-1 |
11361 |
non-autonomous, complete element |
Triticum monococcum |
Thomas Wicker |
| TREP777
| DNA transposon, TIR, CACTA |
DTC_Enac_AY146588-2 |
11397 |
non-autonomous, complete element |
Triticum monococcum |
Thomas Wicker |
| TREP3438
| DNA transposon, TIR, CACTA |
DTC_Eric_B_consensus-1 |
7926 |
consensus sequence |
Zea mays |
Thomas Wicker |
| TREP3423
| DNA transposon, TIR, CACTA |
DTC_Eric_consensus-1 |
10606 |
consensus sequence |
Oryza sativa |
Thomas Wicker |
| TREP3018
| DNA transposon, TIR, CACTA |
DTC_Fergat_103H9-1 |
2874 |
complete element |
Triticum durum |
Thomas Wicker |
| TREP3019
| DNA transposon, TIR, CACTA |
DTC_Fergat_42j2-4 |
2371 |
5'fragment |
Triticum aestivum |
Thomas Wicker |
| TREP2242
| DNA transposon, TIR, CACTA |
DTC_Francis_EF067844-1 |
5202 |
complete element |
Hordeum vulgare |
Takao Komatsuda |
| TREP3407
| DNA transposon, TIR, CACTA |
DTC_Garth_B_consensus-1 |
6968 |
consensus sequence, non-autonomous |
Arabidopsis thaliana |
Thomas Wicker |
| TREP3406
| DNA transposon, TIR, CACTA |
DTC_Garth_consensus-1 |
1746 |
consensus sequence, non-autonomous |
Arabidopsis thaliana |
Thomas Wicker |
| TREP1519
| DNA transposon, TIR, CACTA |
DTC_Gaston_AY661558-9 |
2344 |
complete non-autonomous element (3 bp TSD) |
Hordeum vulgare |
Thomas Wicker |
| TREP2068
| DNA transposon, TIR, CACTA |
DTC_Gaston_AY853252-9 |
2715 |
complete element (3 bp TSD) |
Hordeum vulgare |
Marion Roeder |
| TREP2243
| DNA transposon, TIR, CACTA |
DTC_Gaston_EF067844-2 |
1792 |
complete element |
Hordeum vulgare |
Takao Komatsuda |
| TREP3020
| DNA transposon, TIR, CACTA |
DTC_Gaston_M801L24-1 |
1723 |
complete element, non-autonomous |
Hordeum vulgare |
Thomas Wicker |
| TREP3424
| DNA transposon, TIR, CACTA |
DTC_Grover_consensus-1 |
11420 |
consensus sequence |
Oryza sativa |
Thomas Wicker |
| TREP3021
| DNA transposon, TIR, CACTA |
DTC_Hamlet_10k23-1 |
1238 |
complete element, non-autonomous |
Triticum aestivum |
Thomas Wicker |
| TREP1803
| DNA transposon, TIR, CACTA |
DTC_Hamlet_294D11-3 |
1431 |
complete element (3 bp TSD) |
Triticum durum |
Thomas Wicker |
| TREP3022
| DNA transposon, TIR, CACTA |
DTC_Hamlet_42j2-1 |
1044 |
complete element, non-autonomous |
Triticum aestivum |
Thomas Wicker |
| TREP3023
| DNA transposon, TIR, CACTA |
DTC_Hamlet_42j2-2 |
717 |
5'fragment, non-autonomous |
Triticum aestivum |
Thomas Wicker |
| TREP3024
| DNA transposon, TIR, CACTA |
DTC_Hamlet_42j2-5 |
938 |
complete element, non-autonomous |
Triticum aestivum |
Thomas Wicker |
| TREP2205
| DNA transposon, TIR, CACTA |
DTC_Hamlet_464G14-3 |
1402 |
complete element (3 bp TSD) |
Triticum aestivum |
Silvie Cloutier |
| TREP2207
| DNA transposon, TIR, CACTA |
DTC_Hamlet_464G14-5 |
859 |
fragment |
Triticum aestivum |
Silvie Cloutier |
| TREP763
| DNA transposon, TIR, CACTA |
DTC_Hamlet_AF234649-2 |
750 |
SNAC, complete element, (3 bp TSD) |
Triticum aestivum |
Thomas Wicker |
| TREP764
| DNA transposon, TIR, CACTA |
DTC_Hamlet_AF325198-1 |
1530 |
SNAC complete element, (3 bp TSD) |
Triticum aestivum |
Thomas Wicker |
| TREP1302
| DNA transposon, TIR, CACTA |
DTC_Hamlet_AF459088-1 |
1350 |
SNAC, complete element |
Triticum monococcum |
Jorge Dubcovsky |
| TREP784
| DNA transposon, TIR, CACTA |
DTC_Hamlet_AY146587-1 |
1305 |
SNAC, complete element, (3 bp TSD) |
Triticum durum |
Thomas Wicker |
| TREP785
| DNA transposon, TIR, CACTA |
DTC_Hamlet_AY146587-3 |
807 |
3' truncated |
Triticum durum |
Thomas Wicker |
| TREP780
| DNA transposon, TIR, CACTA |
DTC_Hamlet_AY146588-2 |
1371 |
SNAC, complete element, (3 bp TSD) |
Triticum monococcum |
Thomas Wicker |
| TREP753
| DNA transposon, TIR, CACTA |
DTC_Hamlet_BF618436-1 |
143 |
fragment of terminal repeat |
Hordeum vulgare |
Thomas Wicker |
| TREP3416
| DNA transposon, TIR, CACTA |
DTC_Hamlet_consensus-1 |
1385 |
consensus sequence |
Triticeae |
Thomas Wicker |
| TREP3439
| DNA transposon, TIR, CACTA |
DTC_Helios_consensus-1 |
12259 |
consensus sequence |
Zea mays |
Thomas Wicker |
| TREP2249
| DNA transposon, TIR, CACTA |
DTC_Heyjude_103H9-2 |
3772 |
complete element, hybrid with Jude |
Triticum durum |
Thomas Wicker |
| TREP3025
| DNA transposon, TIR, CACTA |
DTC_Heyjude_42j2-2 |
3759 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP3408
| DNA transposon, TIR, CACTA |
DTC_Horace_consensus-1 |
7985 |
consensus sequence |
Arabidopsis thaliana |
Thomas Wicker |
| TREP3409
| DNA transposon, TIR, CACTA |
DTC_Irvin_consensus-1 |
4799 |
consensus sequence, non-autonomous |
Arabidopsis thaliana |
Thomas Wicker |
| TREP1710
| DNA transposon, TIR, CACTA |
DTC_Isaac_1020F19-1 |
5198 |
complete element (3 bp TSD) |
Triticum aestivum |
Thomas Wicker |
| TREP1811
| DNA transposon, TIR, CACTA |
DTC_Isaac_294D11-1 |
17960 |
complete element (3 bp TSD) |
Triticum durum |
Thomas Wicker |
| TREP1812
| DNA transposon, TIR, CACTA |
DTC_Isaac_294D11-3 |
10200 |
complete element (3 bp TSD) |
Triticum durum |
Thomas Wicker |
| TREP782
| DNA transposon, TIR, CACTA |
DTC_Isaac_AY146587-1 |
13135 |
complete element, (3 bp TSD) |
Triticum durum |
Thomas Wicker |
| TREP3417
| DNA transposon, TIR, CACTA |
DTC_Isaac_consensus-1 |
21226 |
consensus sequence |
Triticeae |
Thomas Wicker |
| TREP3425
| DNA transposon, TIR, CACTA |
DTC_Isidor_consensus-1 |
11265 |
consensus sequence |
Oryza sativa |
Thomas Wicker |
| TREP3440
| DNA transposon, TIR, CACTA |
DTC_Ivan_consensus-1 |
11135 |
consensus sequence |
Zea mays |
Thomas Wicker |
| TREP2245
| DNA transposon, TIR, CACTA |
DTC_Ivan_EF067844-4 |
1080 |
5' truncated |
Hordeum vulgare |
Takao Komatsuda |
| TREP3426
| DNA transposon, TIR, CACTA |
DTC_Janus_consensus-1 |
13126 |
consensus sequence |
Oryza sativa |
Thomas Wicker |
| TREP3410
| DNA transposon, TIR, CACTA |
DTC_Jeffrey_consensus-1 |
4282 |
consensus sequence, non-autonomous |
Arabidopsis thaliana |
Thomas Wicker |
| TREP3441
| DNA transposon, TIR, CACTA |
DTC_Joey_consensus-1 |
12258 |
consensus sequence |
Zea mays |
Thomas Wicker |
| TREP766
| DNA transposon, TIR, CACTA |
DTC_Jorge_231A16-1 |
14733 |
complete element, (3 bp TSD) |
Triticum monococcum |
|
| TREP1813
| DNA transposon, TIR, CACTA |
DTC_Jorge_294D11-1 |
3803 |
5'fragment |
Triticum durum |
Thomas Wicker |
| TREP3026
| DNA transposon, TIR, CACTA |
DTC_Jorge_59e04-1 |
27219 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP765
| DNA transposon, TIR, CACTA |
DTC_Jorge_AF326781-1 |
15807 |
complete element, (3 bp TSD) |
Triticum monococcum |
Thomas Wicker |
| TREP1322
| DNA transposon, TIR, CACTA |
DTC_Jorge_AF459088-1 |
4215 |
fragment |
Triticum monococcum |
Jorge Dubcovsky |
| TREP1234
| DNA transposon, TIR, CACTA |
DTC_Jorge_AY188331-2 |
1821 |
fragment |
Triticum monococcum |
Jorge Dubcovsky |
| TREP1245
| DNA transposon, TIR, CACTA |
DTC_Jorge_AY188332-1 |
211 |
putative complete element |
Triticum monococcum |
Jorge Dubcovsky |
| TREP3027
| DNA transposon, TIR, CACTA |
DTC_Jude_42j2-13 |
1219 |
fragment |
Triticum aestivum |
Thomas Wicker |
| TREP3028
| DNA transposon, TIR, CACTA |
DTC_Jude_42j2-9 |
1855 |
3'fragment |
Triticum aestivum |
Thomas Wicker |
| TREP28
| DNA transposon, TIR, CACTA |
DTC_Jude_464G14-1 |
2986 |
complete? |
Triticum aestivum |
Silvie Cloutier |
| TREP1248
| DNA transposon, TIR, CACTA |
DTC_Jude_AF325196-1 |
1363 |
fragment |
Triticum aestivum |
Thomas Wicker |
| TREP747
| DNA transposon, TIR, CACTA |
DTC_Jude_AF446141-1 |
6255 |
complete element, (3 bp TSD) |
Aegilops tauschii |
Thomas Wicker |
| TREP3029
| DNA transposon, TIR, CACTA |
DTC_Kane_EF540321-1 |
1579 |
complete element, non-autonomous |
Triticum turgidum |
Jorge Dubcovsky |
| TREP3411
| DNA transposon, TIR, CACTA |
DTC_Korbin_consensus-1 |
8253 |
consensus sequence |
Arabidopsis thaliana |
Thomas Wicker |
| TREP1717
| DNA transposon, TIR, CACTA |
DTC_Mandrake_1020F19-1 |
1930 |
3' end |
Triticum aestivum |
Thomas Wicker |
| TREP3030
| DNA transposon, TIR, CACTA |
DTC_Mandrake_42j2-1 |
3299 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP757
| DNA transposon, TIR, CACTA |
DTC_Mandrake_AF234649-1 |
1119 |
SNAC, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP746
| DNA transposon, TIR, CACTA |
DTC_Mandrake_AF446141-1 |
3411 |
complete element, (3 bp TSD) |
Aegilops tauschii |
Thomas Wicker |
| TREP783
| DNA transposon, TIR, CACTA |
DTC_Mandrake_AY146587-1 |
930 |
SNAC, complete element, (3 bp TSD) |
Triticum durum |
Thomas Wicker |
| TREP779
| DNA transposon, TIR, CACTA |
DTC_Mandrake_AY146588-1 |
898 |
SNAC, complete element, (3 bp TSD) |
Triticum monococcum |
Thomas Wicker |
| TREP2018
| DNA transposon, TIR, CACTA |
DTC_Mandrake_AY853252-1 |
2896 |
5' fragment |
Hordeum vulgare |
Marion Roeder |
| TREP2019
| DNA transposon, TIR, CACTA |
DTC_Mandrake_AY853252-2 |
1200 |
fragment |
Hordeum vulgare |
Marion Roeder |
| TREP754
| DNA transposon, TIR, CACTA |
DTC_Mandrake_BG309793-1 |
736 |
fragment of terminal repeat |
Hordeum vulgare |
Thomas Wicker |
| TREP2308
| DNA transposon, TIR, CACTA |
DTC_Manor_EF067844-1 |
7035 |
truncated |
Hordeum vulgare |
Takao Komatsuda |
| TREP2309
| DNA transposon, TIR, CACTA |
DTC_Manor_EF067844-2 |
4153 |
5' truncated |
Hordeum vulgare |
Takao Komatsuda |
| TREP2023
| DNA transposon, TIR, CACTA |
DTC_Nico_AY853252-1 |
9779 |
degenerated CDS |
Hordeum vulgare |
Marion Roeder |
| TREP3442
| DNA transposon, TIR, CACTA |
DTC_Norman_consensus-1 |
10413 |
consensus sequence |
Zea mays |
Thomas Wicker |
| TREP3443
| DNA transposon, TIR, CACTA |
DTC_Oswald_consensus-1 |
10971 |
consensus sequence |
Zea mays |
Thomas Wicker |
| TREP3309
| DNA transposon, TIR, CACTA |
DTC_Pavel_AY188332-1 |
5946 |
5'fragment |
Triticum monococcum |
Jorge Dubcovsky |
| TREP3444
| DNA transposon, TIR, CACTA |
DTC_Preston_consensus-1 |
18869 |
consensus sequence |
Zea mays |
Thomas Wicker |
| TREP3427
| DNA transposon, TIR, CACTA |
DTC_Radon_consensus-1 |
11607 |
consensus sequence |
Oryza sativa |
Thomas Wicker |
| TREP3428
| DNA transposon, TIR, CACTA |
DTC_Rufus_consensus-1 |
11216 |
consensus sequence |
Oryza sativa |
Thomas Wicker |
| TREP3429
| DNA transposon, TIR, CACTA |
DTC_Sandro_consensus-1 |
11931 |
consensus sequence |
Oryza sativa |
Thomas Wicker |
| TREP3430
| DNA transposon, TIR, CACTA |
DTC_Seamus_consensus-1 |
8871 |
consensus sequence |
Oryza sativa |
Thomas Wicker |
| TREP3031
| DNA transposon, TIR, CACTA |
DTC_Sherlock_42j2-1 |
1645 |
fragment |
Triticum aestivum |
Thomas Wicker |
| TREP1540
| DNA transposon, TIR, CACTA |
DTC_Sherlock_AY661558-1 |
224 |
fragment |
Hordeum vulgare |
Thomas Wicker |
| TREP1541
| DNA transposon, TIR, CACTA |
DTC_Sherlock_AY661558-2 |
9890 |
3'fragment |
Hordeum vulgare |
Thomas Wicker |
| TREP1542
| DNA transposon, TIR, CACTA |
DTC_Sherlock_AY661558-3 |
9243 |
fragment |
Hordeum vulgare |
Thomas Wicker |
| TREP1543
| DNA transposon, TIR, CACTA |
DTC_Sherlock_AY661558-4 |
9497 |
3'fragment |
Hordeum vulgare |
Thomas Wicker |
| TREP1544
| DNA transposon, TIR, CACTA |
DTC_Sherlock_AY661558-5 |
9651 |
3'fragment |
Hordeum vulgare |
Thomas Wicker |
| TREP1545
| DNA transposon, TIR, CACTA |
DTC_Sherlock_AY661558-6 |
631 |
fragment |
Hordeum vulgare |
Thomas Wicker |
| TREP1546
| DNA transposon, TIR, CACTA |
DTC_Sherlock_AY661558-7 |
1633 |
fragment |
Hordeum vulgare |
Thomas Wicker |
| TREP1547
| DNA transposon, TIR, CACTA |
DTC_Sherlock_AY661558-8 |
89 |
fragment |
Hordeum vulgare |
Thomas Wicker |
| TREP2089
| DNA transposon, TIR, CACTA |
DTC_Sherlock_AY853252-2 |
315 |
3'end |
Hordeum vulgare |
Marion Roeder |
| TREP3433
| DNA transposon, TIR, CACTA |
DTC_Sherlock_consensus-1 |
9517 |
consensus sequence |
Triticeae |
Thomas Wicker |
| TREP3431
| DNA transposon, TIR, CACTA |
DTC_Sherman_consensus-1 |
13123 |
consensus sequence |
Oryza sativa |
Thomas Wicker |
| TREP3432
| DNA transposon, TIR, CACTA |
DTC_Storm_consensus-1 |
12603 |
consensus sequence |
Oryza sativa |
Thomas Wicker |
| TREP767
| DNA transposon, TIR, CACTA |
DTC_TAT1_AF325196-1 |
5828 |
complete element (3 bp TSD) |
Triticum aestivum |
Thomas Wicker |
| TREP768
| DNA transposon, TIR, CACTA |
DTC_TAT1_AF427791-1 |
7849 |
complete element, (3 bp TSD) |
Hordeum vulgare |
Thomas Wicker |
| TREP1318
| DNA transposon, TIR, CACTA |
DTC_TAT1_AF459088-1 |
14576 |
complete element |
Triticum monococcum |
Jorge Dubcovsky |
| TREP1203
| DNA transposon, TIR, CACTA |
DTC_TAT1_AF492368-1 |
271 |
fragment |
Aegilops tauschii |
Thomas Wicker |
| TREP1204
| DNA transposon, TIR, CACTA |
DTC_TAT1_AF492370-1 |
271 |
fragment |
Hordeum vulgare |
Thomas Wicker |
| TREP1205
| DNA transposon, TIR, CACTA |
DTC_TAT1_AF492371-1 |
271 |
fragment |
Aegilops tauschii |
Thomas Wicker |
| TREP1206
| DNA transposon, TIR, CACTA |
DTC_TAT1_AF492372-1 |
271 |
fragment |
Hordeum vulgare |
Thomas Wicker |
| TREP1207
| DNA transposon, TIR, CACTA |
DTC_TAT1_AF492373-1 |
271 |
fragment |
Triticum urartu |
Thomas Wicker |
| TREP1208
| DNA transposon, TIR, CACTA |
DTC_TAT1_AF492374-1 |
271 |
fragment |
Triticum monococcum |
Thomas Wicker |
| TREP1209
| DNA transposon, TIR, CACTA |
DTC_TAT1_AF492375-1 |
271 |
fragment |
Secale cereale |
Thomas Wicker |
| TREP1210
| DNA transposon, TIR, CACTA |
DTC_TAT1_AF492376-1 |
271 |
fragment |
Secale cereale |
Thomas Wicker |
| TREP1211
| DNA transposon, TIR, CACTA |
DTC_TAT1_AF492377-1 |
271 |
fragment |
Aegilops speltoides |
Thomas Wicker |
| TREP1212
| DNA transposon, TIR, CACTA |
DTC_TAT1_AF492383-1 |
271 |
fragment |
Hordeum vulgare |
Ruslan Kalendar |
| TREP761
| DNA transposon, TIR, CACTA |
DTC_TAT1_BJ247168-1 |
414 |
fragment of terminal repeat |
Triticum aestivum |
Thomas Wicker |
| TREP762
| DNA transposon, TIR, CACTA |
DTC_TAT1_BJ253225-1 |
514 |
fragment of terminal repeat |
Triticum aestivum |
Thomas Wicker |
| TREP1241
| DNA transposon, TIR, CACTA |
DTC_TAT2_231A16-1 |
4506 |
complete element |
Triticum monococcum |
|
| TREP786
| DNA transposon, TIR, CACTA |
DTC_TAT2_AY146587-1 |
3158 |
5' truncated |
Triticum durum |
Thomas Wicker |
| TREP1478
| DNA transposon, TIR, CACTA |
DTC_TAT2_AY494981-1 |
4015 |
complete element |
Triticum turgidum |
Eduard Akhunov |
| TREP2041
| DNA transposon, TIR, CACTA |
DTC_TAT3_AY853252-1 |
5267 |
complete element? |
Hordeum vulgare |
Marion Roeder |
| TREP1477
| DNA transposon, TIR, CACTA |
DTC_TAT4_AY368673-1 |
1917 |
complete element |
Triticum turgidum |
Thomas Wicker |
| TREP2221
| DNA transposon, TIR, CACTA |
DTC_TAT5_464G14-1 |
1156 |
complete element (3 bp TSD) |
Triticum aestivum |
Silvie Cloutier |
| TREP11
| DNA transposon, TIR, CACTA |
DTC_unnamed_AJ406396-1 |
640 |
fragment of transposase |
Triticum aestivum |
GenBank |
| TREP1635
| DNA transposon, TIR, CACTA |
DTC_unnamed_AY643843-1 |
2146 |
complete element (3 bp TSD) |
Hordeum vulgare |
Katherine Caldwell |
| TREP2350
| DNA transposon, TIR, CACTA |
DTC_unnamed_EF067844-1 |
2424 |
fragment |
Hordeum vulgare |
Takao Komatsuda |
| TREP3032
| DNA transposon, TIR, CACTA |
DTC_Vincent_42j2-1 |
1976 |
3'fragment |
Triticum aestivum |
Thomas Wicker |
| TREP1565
| DNA transposon, TIR, CACTA |
DTC_Vincent_AY661558-1 |
8485 |
complete element (3 bp TSD) |
Hordeum vulgare |
Thomas Wicker |
| TREP1566
| DNA transposon, TIR, CACTA |
DTC_Vincent_AY661558-2 |
7337 |
3'fragment, contains foreign gene fragment Os06g02620 |
Hordeum vulgare |
Thomas Wicker |
| TREP1567
| DNA transposon, TIR, CACTA |
DTC_Vincent_AY661558-3 |
5874 |
complete element (3 bp TSD) |
Hordeum vulgare |
Thomas Wicker |
| TREP1568
| DNA transposon, TIR, CACTA |
DTC_Vincent_AY661558-4 |
7339 |
5'fragment |
Hordeum vulgare |
Thomas Wicker |
| TREP1569
| DNA transposon, TIR, CACTA |
DTC_Vincent_AY661558-5 |
5877 |
complete element (3 bp TSD) |
Hordeum vulgare |
Thomas Wicker |
| TREP3310
| DNA transposon, TIR, CACTA |
DTC_Vincent_B_M191K21-1 |
4916 |
complete element, contains foreign gene fragments |
Hordeum vulgare |
Thomas Wicker |
| TREP2358
| DNA transposon, TIR, CACTA |
DTC_Vincent_EF067844-1 |
5813 |
complete element |
Hordeum vulgare |
Takao Komatsuda |
| TREP3033
| DNA transposon, TIR, CACTA |
DTC_Vincent_M801L24-1 |
6389 |
complete element, contains foreign gene fragments |
Hordeum vulgare |
Thomas Wicker |
| TREP3434
| DNA transposon, TIR, CACTA |
DTC_VincentTIR_consensus-1 |
1992 |
consensus sequence |
Triticeae |
Thomas Wicker |
| TREP2251
| DNA transposon, TIR, Harbinger |
DTH_Coeus_643D12-1 |
273 |
Tourist MITE, complete element? |
Triticum durum |
Eduard Akhunov |
| TREP1670
| DNA transposon, TIR, Harbinger |
DTH_Islay_296827-1 |
274 |
Tourist MITE, complete element (3 bp TSD) |
Hordeum vulgare |
|
| TREP2081
| DNA transposon, TIR, Harbinger |
DTH_Islay_AY853252-1 |
275 |
Tourist MITE, complete element (3 bp TSD) |
Hordeum vulgare |
Marion Roeder |
| TREP1673
| DNA transposon, TIR, Harbinger |
DTH_Jura_466470-1 |
416 |
Tourist MITE, complete element (3 bp TSD) |
Hordeum spontaneum |
Thomas Wicker |
| TREP1672
| DNA transposon, TIR, Harbinger |
DTH_Jura_X60292-1 |
391 |
Tourist MITE, complete element (3 bp TSD) |
Hordeum vulgare |
Thomas Wicker |
| TREP1660
| DNA transposon, TIR, Harbinger |
DTH_Kerberos_AY643842-1 |
279 |
Tourist MITE |
Hordeum vulgare |
Katherine Caldwell |
| TREP1661
| DNA transposon, TIR, Harbinger |
DTH_Kerberos_AY643842-2 |
282 |
Tourist MITE |
Hordeum vulgare |
Katherine Caldwell |
| TREP1662
| DNA transposon, TIR, Harbinger |
DTH_Kerberos_AY643844-1 |
300 |
Tourist MITE, complete element (3 bp TSD) |
Hordeum vulgare |
Katherine Caldwell |
| TREP2104
| DNA transposon, TIR, Harbinger |
DTH_Kerberos_AY853252-1 |
288 |
Tourist MITE, fragment |
Hordeum vulgare |
Marion Roeder |
| TREP3445
| DNA transposon, TIR, Harbinger |
DTH_Kerberos_consensus-1 |
285 |
consensus sequence |
Triticeae |
Thomas Wicker |
| TREP2355
| DNA transposon, TIR, Harbinger |
DTH_Kerberos_EF067844-1 |
291 |
Tourist MITE, complete element |
Hordeum vulgare |
Takao Komatsuda |
| TREP1607
| DNA transposon, TIR, Harbinger |
DTH_Kong_109N23-1 |
350 |
fragment |
Triticum monococcum |
|
| TREP3311
| DNA transposon, TIR, Harbinger |
DTH_Kong_59e04-1 |
1300 |
fragment |
Triticum aestivum |
Thomas Wicker |
| TREP3034
| DNA transposon, TIR, Harbinger |
DTH_Kong_AC200779-1 |
2074 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP3035
| DNA transposon, TIR, Harbinger |
DTH_Kong_AC200818-1 |
1758 |
5'fragment |
Triticum aestivum |
Thomas Wicker |
| TREP3036
| DNA transposon, TIR, Harbinger |
DTH_Kong_AC200849-1 |
2164 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP3037
| DNA transposon, TIR, Harbinger |
DTH_Kong_AC216558-1 |
2075 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP3038
| DNA transposon, TIR, Harbinger |
DTH_Kong_AM050694-1 |
2082 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP3039
| DNA transposon, TIR, Harbinger |
DTH_Kong_AY188331-1 |
2086 |
complete element |
Triticum monococcum |
Jorge Dubcovsky |
| TREP3042
| DNA transposon, TIR, Harbinger |
DTH_Kong_AY914080-1 |
2436 |
complete element, non-autonomous |
Triticum monococcum |
Takao Komatsuda |
| TREP3043
| DNA transposon, TIR, Harbinger |
DTH_Kong_AY914080-2 |
1818 |
complete element, non-autonomous |
Triticum monococcum |
Takao Komatsuda |
| TREP3040
| DNA transposon, TIR, Harbinger |
DTH_Kong_consensus-1 |
2119 |
consensus sequence |
Triticeae |
Thomas Wicker |
| TREP3041
| DNA transposon, TIR, Harbinger |
DTH_Kong_DQ767614-1 |
2148 |
complete element |
Triticum monococcum |
Thomas Wicker |
| TREP1819
| DNA transposon, TIR, Harbinger |
DTH_Orpheus_294D11-1 |
242 |
Tourist MITE, complete element (3 bp TSD) |
Triticum durum |
Thomas Wicker |
| TREP3446
| DNA transposon, TIR, Harbinger |
DTH_Orpheus_AC200842-1 |
278 |
complete element |
Triticeae |
Thomas Wicker |
| TREP833
| DNA transposon, TIR, Harbinger |
DTH_Orpheus_AY146587-1 |
278 |
Tourist MITE, complete element, (3 bp TSD) |
Triticum durum |
Thomas Wicker |
| TREP834
| DNA transposon, TIR, Harbinger |
DTH_Orpheus_AY146587-2 |
278 |
Tourist MITE, complete element, (3 bp TSD) |
Triticum durum |
Thomas Wicker |
| TREP3447
| DNA transposon, TIR, Harbinger |
DTH_Orpheus_consensus-1 |
272 |
Tourist MITE, consensus sequence |
Triticeae |
Thomas Wicker |
| TREP3448
| DNA transposon, TIR, Harbinger |
DTH_OsKong_consensus-1 |
2589 |
consensus sequence |
Oryza sativa |
Thomas Wicker |
| TREP3044
| DNA transposon, TIR, Harbinger |
DTH_OsKong_OSTIGR5-101 |
2745 |
complete element |
Oryza sativa |
Thomas Wicker |
| TREP3045
| DNA transposon, TIR, Harbinger |
DTH_OsKong_OSTIGR5-102 |
2765 |
complete element |
Oryza sativa |
Thomas Wicker |
| TREP3046
| DNA transposon, TIR, Harbinger |
DTH_OsKong_OSTIGR5-103 |
2622 |
complete element |
Oryza sativa |
Thomas Wicker |
| TREP3047
| DNA transposon, TIR, Harbinger |
DTH_OsKong_OSTIGR5-104 |
2734 |
complete element |
Oryza sativa |
Thomas Wicker |
| TREP3048
| DNA transposon, TIR, Harbinger |
DTH_OsKong_OSTIGR5-105 |
1702 |
complete element |
Oryza sativa |
Thomas Wicker |
| TREP3049
| DNA transposon, TIR, Harbinger |
DTH_OsKong_OSTIGR5-106 |
2245 |
complete element |
Oryza sativa |
Thomas Wicker |
| TREP3050
| DNA transposon, TIR, Harbinger |
DTH_OsKong_OSTIGR5-107 |
1817 |
complete element |
Oryza sativa |
Thomas Wicker |
| TREP3312
| DNA transposon, TIR, Harbinger |
DTH_Pong_BK000586-1 |
5166 |
complete element |
Oryza sativa |
Thomas Wicker |
| TREP3052
| DNA transposon, TIR, Harbinger |
DTH_Rong_AY188332-1 |
1805 |
complete element, non-autonomous |
Triticum monococcum |
Jorge Dubcovsky |
| TREP3051
| DNA transposon, TIR, Harbinger |
DTH_Rong_AY951945-1 |
2418 |
complete element |
|
Jorge Dubcovsky |
| TREP2326
| DNA transposon, TIR, Harbinger |
DTH_unnamed_AY914080-1 |
1251 |
truncated |
Triticum monococcum |
Takao Komatsuda |
| TREP213
| DNA transposon, TIR, Harbinger |
DTH_unnamed_M58753-1 |
134 |
Tourist MITE, complete element (3 bp TSD) |
Hordeum vulgare |
Thomas Wicker |
| TREP3511
| DNA transposon, TIR, Harbinger |
DTH_Victor_DQ885757-1 |
276 |
complete element |
Triticeae |
David Laurie |
| TREP2226
| DNA transposon, TIR, Harbinger |
DTH_Xenon_464G14-1 |
310 |
Tourist MITE, complete element |
Triticum aestivum |
Silvie Cloutier |
| TREP3053
| DNA transposon, TIR, Harbinger |
DTH_Xenon_59e04-1 |
326 |
Tourist MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP2371
| DNA transposon, TIR, Harbinger |
DTH_Xenon_AY914081-1 |
310 |
Tourist MITE, complete element |
Triticum monococcum |
Eduard Akhunov |
| TREP3054
| DNA transposon, TIR, Harbinger |
DTH_Zong_EF067844-1 |
2396 |
complete element |
Hordeum vulgare |
Takao Komatsuda |
| TREP2217
| DNA transposon, TIR, Mutator |
DTM_Annie_AY951945-1 |
1109 |
complete element, ESTs CA595997 and TACA712521 |
Triticum monococcum |
Jorge Dubcovsky |
| TREP795
| DNA transposon, TIR, Mutator |
DTM_Apollo_AY146588-1 |
866 |
complete element, (9 bp TSD) |
Triticum monococcum |
Thomas Wicker |
| TREP3055
| DNA transposon, TIR, Mutator |
DTM_Argo_42j2-2 |
949 |
5'fragment |
Triticum aestivum |
Thomas Wicker |
| TREP3056
| DNA transposon, TIR, Mutator |
DTM_Argo_42j2-3 |
689 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP2202
| DNA transposon, TIR, Mutator |
DTM_Argo_464G14-1 |
1030 |
complete element (9 bp TSD) |
Triticum aestivum |
Silvie Cloutier |
| TREP3057
| DNA transposon, TIR, Mutator |
DTM_Argus_42j2-1 |
342 |
fragment |
Triticum aestivum |
Thomas Wicker |
| TREP3058
| DNA transposon, TIR, Mutator |
DTM_Argus_AM050668-1 |
327 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP230
| DNA transposon, TIR, Mutator |
DTM_Charon_AF326781-1 |
1341 |
complete element, (9 bp TSD) |
Triticum monococcum |
Thomas Wicker |
| TREP232
| DNA transposon, TIR, Mutator |
DTM_Deimos_AF326781-1 |
2159 |
complete element, (9 bp TSD) |
Triticum monococcum |
Thomas Wicker |
| TREP3059
| DNA transposon, TIR, Mutator |
DTM_Gabriel_M801L24-1 |
407 |
complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP2271
| DNA transposon, TIR, Mutator |
DTM_Gerald_103H9-1 |
363 |
complete element (2 bp TSD) |
Triticum durum |
Thomas Wicker |
| TREP2272
| DNA transposon, TIR, Mutator |
DTM_Gerald_AF521177-1 |
153 |
truncated |
Hordeum vulgare |
Thomas Wicker |
| TREP2273
| DNA transposon, TIR, Mutator |
DTM_Gerald_AY485644-1 |
345 |
complete element |
Triticum monococcum |
Eduard Akhunov |
| TREP1171
| DNA transposon, TIR, Mutator |
DTM_Hermes_TREP1171-1 |
1519 |
complete element, (9 bp TSD) |
Triticum tauschii |
|
| TREP731
| DNA transposon, TIR, Mutator |
DTM_HORMU_AF427791-1 |
6162 |
putative complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP729
| DNA transposon, TIR, Mutator |
DTM_HORMU_AF427791-2 |
2230 |
fragment of 5' region |
Hordeum vulgare |
Thomas Wicker |
| TREP1247
| DNA transposon, TIR, Mutator |
DTM_HORMU_AF427791-3 |
1916 |
fragment of 5' region |
Hordeum vulgare |
Thomas Wicker |
| TREP1523
| DNA transposon, TIR, Mutator |
DTM_HORMU_AY661558-1 |
7204 |
complete element? (no TSD) |
Hordeum vulgare |
Thomas Wicker |
| TREP2072
| DNA transposon, TIR, Mutator |
DTM_HORMU2_AY853252-1 |
8917 |
|
Hordeum vulgare |
Marion Roeder |
| TREP831
| DNA transposon, TIR, Mutator |
DTM_Joseph_AY146587-1 |
5612 |
complete element, (9 bp TSD) |
Triticum durum |
Thomas Wicker |
| TREP3060
| DNA transposon, TIR, Mutator |
DTM_Murray_42j2-1 |
937 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP2024
| DNA transposon, TIR, Mutator |
DTM_Oscar_AY853252-1 |
3195 |
fragment |
Hordeum vulgare |
Marion Roeder |
| TREP1319
| DNA transposon, TIR, Mutator |
DTM_Pilifon_AF459088-1 |
4859 |
fragment |
Triticum monococcum |
Jorge Dubcovsky |
| TREP3449
| DNA transposon, TIR, Mutator |
DTM_Pilifon_AY485644-1 |
4869 |
complete element |
Triticeae |
Thomas Wicker |
| TREP3061
| DNA transposon, TIR, Mutator |
DTM_Remus_10k23-1 |
831 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP3062
| DNA transposon, TIR, Mutator |
DTM_Remus_AC200807-1 |
819 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP3063
| DNA transposon, TIR, Mutator |
DTM_Remus_AC200824-1 |
807 |
complete element |
|
Thomas Wicker |
| TREP3064
| DNA transposon, TIR, Mutator |
DTM_Remus_AC207950-1 |
820 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP3065
| DNA transposon, TIR, Mutator |
DTM_Remus_AY914084-1 |
843 |
complete element |
Triticum monococcum |
Thomas Wicker |
| TREP3066
| DNA transposon, TIR, Mutator |
DTM_Remus_AY914085-1 |
843 |
complete element |
|
Thomas Wicker |
| TREP3067
| DNA transposon, TIR, Mutator |
DTM_Remus_consensus-1 |
829 |
consensus sequence |
Triticeae |
Thomas Wicker |
| TREP3068
| DNA transposon, TIR, Mutator |
DTM_Remus_DQ767615-1 |
828 |
complete element |
Triticum monococcum |
Thomas Wicker |
| TREP805
| DNA transposon, TIR, Mutator |
DTM_Rhea_AY146588-1 |
579 |
complete element, (9 bp TSD) |
Triticum monococcum |
Thomas Wicker |
| TREP1674
| DNA transposon, TIR, Mutator |
DTM_Spring_TREP1674-1 |
241 |
complete element (9 bp TSD) |
Hordeum vulgare |
|
| TREP1652
| DNA transposon, TIR, Mutator |
DTM_Troy_AY643842-1 |
331 |
complete element (9 bp TSD) |
Hordeum vulgare |
Katherine Caldwell |
| TREP3313
| DNA transposon, TIR, Mutator |
DTM_unnamed_AY268139-1 |
1063 |
3'fragment |
Hordeum vulgare |
Thomas Wicker |
| TREP3503
| DNA transposon, TIR, Mutator |
DTM_Vacuna_AF509533-1 |
483 |
complete element |
Aegilops tauschii |
Alberto Cenci |
| TREP3504
| DNA transposon, TIR, Mutator |
DTM_Vacuna_AF509534-1 |
484 |
complete element |
Aegilops tauschii |
Alberto Cenci |
| TREP3500
| DNA transposon, TIR, Mutator |
DTM_Vacuna_AM884195-1 |
482 |
complete element |
Triticum turgidum ssp. dicoccoides |
Alberto Cenci |
| TREP3501
| DNA transposon, TIR, Mutator |
DTM_Vacuna_AM884196-1 |
484 |
complete element |
Triticum turgidum ssp. dicoccoides |
Alberto Cenci |
| TREP3512
| DNA transposon, TIR, Mutator |
DTM_Vacuna_consensus-1 |
464 |
complete element |
Triticeae |
Thomas Wicker |
| TREP3502
| DNA transposon, TIR, Mutator |
DTM_Vacuna_CT009588-1 |
484 |
complete element, present in orthologous position in Triticum aestivum CT009585 |
Triticum turgidum ssp. durum |
Alberto Cenci |
| TREP3505
| DNA transposon, TIR, Mutator |
DTM_Vacuna_CW991740-1 |
515 |
complete element |
Triticum aestivum |
Alberto Cenci |
| TREP825
| DNA transposon, TIR, Mutator |
DTM_Zeus_AY146588-1 |
1401 |
complete element, (9 bp TSD) |
Triticum monococcum |
Thomas Wicker |
| TREP3069
| DNA transposon, TIR, Mariner |
DTT_Aison_42j2-1 |
190 |
fragment |
Triticum aestivum |
Thomas Wicker |
| TREP3070
| DNA transposon, TIR, Mariner |
DTT_Aison_AC200839-1 |
215 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP3071
| DNA transposon, TIR, Mariner |
DTT_Aison_AC207943-1 |
219 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP3072
| DNA transposon, TIR, Mariner |
DTT_Aison_AM050668-1 |
219 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP3073
| DNA transposon, TIR, Mariner |
DTT_Aison_consensus-1 |
219 |
consensus sequence |
Triticeae |
Thomas Wicker |
| TREP1601
| DNA transposon, TIR, Mariner |
DTT_Antonio_109N23-1 |
108 |
Stowaway MITE, complete element (2 bp TSD) |
Triticum monococcum |
|
| TREP121
| DNA transposon, TIR, Mariner |
DTT_Athos_103H9-1 |
85 |
Stowaway MITE, complete element |
Triticum durum |
Thomas Wicker |
| TREP123
| DNA transposon, TIR, Mariner |
DTT_Athos_103H9-3 |
84 |
Stowaway MITE |
Triticum durum |
Thomas Wicker |
| TREP122
| DNA transposon, TIR, Mariner |
DTT_Athos_103H9-4 |
86 |
Stowaway MITE, complete element |
Triticum durum |
Thomas Wicker |
| TREP1609
| DNA transposon, TIR, Mariner |
DTT_Athos_109N23-1 |
84 |
Stowaway MITE, complete element (2 bp TSD) |
Triticum monococcum |
|
| TREP3074
| DNA transposon, TIR, Mariner |
DTT_Athos_42j2-11 |
85 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP3075
| DNA transposon, TIR, Mariner |
DTT_Athos_42j2-12 |
85 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP3076
| DNA transposon, TIR, Mariner |
DTT_Athos_42j2-14 |
85 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP3077
| DNA transposon, TIR, Mariner |
DTT_Athos_42j2-16 |
85 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP3078
| DNA transposon, TIR, Mariner |
DTT_Athos_42j2-2 |
85 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP3079
| DNA transposon, TIR, Mariner |
DTT_Athos_42j2-4 |
85 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP3080
| DNA transposon, TIR, Mariner |
DTT_Athos_42j2-5 |
85 |
complete element |
Triticum aestivum |
Thomas Wicker |
| TREP217
| DNA transposon, TIR, Mariner |
DTT_Athos_AF326781-1 |
85 |
Stowaway MITE, complete element (2 bp TSD) |
Triticum monococcum |
Thomas Wicker |
| TREP735
| DNA transposon, TIR, Mariner |
DTT_Athos_AF427791-4 |
63 |
Stowaway MITE, putative, degenerated |
Hordeum vulgare |
Thomas Wicker |
| TREP850
| DNA transposon, TIR, Mariner |
DTT_Athos_AJ461536-1 |
115 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP851
| DNA transposon, TIR, Mariner |
DTT_Athos_AJ475374-1 |
85 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP852
| DNA transposon, TIR, Mariner |
DTT_Athos_AV910077-1 |
85 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP853
| DNA transposon, TIR, Mariner |
DTT_Athos_AV912245-1 |
85 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP854
| DNA transposon, TIR, Mariner |
DTT_Athos_AV929165-1 |
70 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP855
| DNA transposon, TIR, Mariner |
DTT_Athos_AV930097-1 |
86 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP856
| DNA transposon, TIR, Mariner |
DTT_Athos_AV931903-1 |
95 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP857
| DNA transposon, TIR, Mariner |
DTT_Athos_AV932798-1 |
85 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP858
| DNA transposon, TIR, Mariner |
DTT_Athos_AV934393-1 |
85 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP859
| DNA transposon, TIR, Mariner |
DTT_Athos_AV936022-1 |
85 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP860
| DNA transposon, TIR, Mariner |
DTT_Athos_AV937041-1 |
86 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP861
| DNA transposon, TIR, Mariner |
DTT_Athos_AV942238-1 |
95 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP862
| DNA transposon, TIR, Mariner |
DTT_Athos_AV943442-1 |
70 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP863
| DNA transposon, TIR, Mariner |
DTT_Athos_AV946465-1 |
95 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP864
| DNA transposon, TIR, Mariner |
DTT_Athos_AV946510-1 |
86 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP865
| DNA transposon, TIR, Mariner |
DTT_Athos_AV947157-1 |
86 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP1654
| DNA transposon, TIR, Mariner |
DTT_Athos_AY643844-1 |
85 |
Stowaway MITE |
Hordeum vulgare |
Katherine Caldwell |
| TREP2000
| DNA transposon, TIR, Mariner |
DTT_Athos_AY853252-1 |
85 |
Stowaway MITE, complete element (2 bp TSD) |
Hordeum vulgare |
Marion Roeder |
| TREP2001
| DNA transposon, TIR, Mariner |
DTT_Athos_AY853252-2 |
73 |
Stowaway MITE, fragment |
Hordeum vulgare |
Marion Roeder |
| TREP2002
| DNA transposon, TIR, Mariner |
DTT_Athos_AY853252-3 |
73 |
Stowaway MITE, fragment |
Hordeum vulgare |
Marion Roeder |
| TREP866
| DNA transposon, TIR, Mariner |
DTT_Athos_BE193974-1 |
61 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP867
| DNA transposon, TIR, Mariner |
DTT_Athos_BE427704-1 |
85 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP868
| DNA transposon, TIR, Mariner |
DTT_Athos_BE428816-1 |
85 |
Stowaway MITE, complete element |
Triticum turgidum |
Thomas Wicker |
| TREP869
| DNA transposon, TIR, Mariner |
DTT_Athos_BE429642-1 |
85 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP870
| DNA transposon, TIR, Mariner |
DTT_Athos_BE455911-1 |
66 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP871
| DNA transposon, TIR, Mariner |
DTT_Athos_BE516055-1 |
85 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP872
| DNA transposon, TIR, Mariner |
DTT_Athos_BE587851-1 |
85 |
Stowaway MITE, complete element |
Secale cereale |
Thomas Wicker |
| TREP873
| DNA transposon, TIR, Mariner |
DTT_Athos_BE705232-1 |
85 |
Stowaway MITE, complete element |
Secale cereale |
Thomas Wicker |
| TREP874
| DNA transposon, TIR, Mariner |
DTT_Athos_BE705442-1 |
85 |
Stowaway MITE, complete element |
Secale cereale |
Thomas Wicker |
| TREP875
| DNA transposon, TIR, Mariner |
DTT_Athos_BF292198-1 |
86 |
Stowaway MITE, complete element |
Aegilops speltoides |
Thomas Wicker |
| TREP876
| DNA transposon, TIR, Mariner |
DTT_Athos_BF478657-1 |
85 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP877
| DNA transposon, TIR, Mariner |
DTT_Athos_BF485294-1 |
85 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP878
| DNA transposon, TIR, Mariner |
DTT_Athos_BG415487-1 |
68 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP879
| DNA transposon, TIR, Mariner |
DTT_Athos_BG904862-1 |
85 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP880
| DNA transposon, TIR, Mariner |
DTT_Athos_BG907379-1 |
85 |
Stowaway MITE, complete element |
Triticum aestivum |
Thomas Wicker |
| TREP881
| DNA transposon, TIR, Mariner |
DTT_Athos_BI957093-1 |
86 |
Stowaway MITE, complete element |
Hordeum vulgare |
Thomas Wicker |
| TREP882
| DNA transposon, TIR, Mariner |
DTT_Athos_BJ208036-1 |
85 |
Stowaway MITE, complete element |
Triticum aesti |