CLUSTAL W (1.83) multiple sequence alignment


UCD001_A11_BF292245LD01P001D06D12F1_081.      ------------------GATGACATGCTTAAGCACTTCG
UCD001_D11_BF292245LD04P001D06D12F1_090.      ------------------GATGACATGCTTAAGCACATGG
UCD001_F11_BF292245LD06P001D06D12F1_091.      ------------------GATGACATGCTTAAGCACATGG
UCD001_E11_BF292245LD05P001D06D12F1_083.      -------GATCCAGTTATGATGACATGCTTAAGCACATGG
UCD001_H11_BF292245LD08P001D06D12F1_092.      -------------GTTATGATGAC-TGCTTAAGCACATGG
UCD001_B11_BF292245LD02P001D06D12F1_089.      ------------AGTTATGATGAC-TGCTTAAGCACATGG
UCD001_C11_BF292245LD03P001D06D12F1_082.      TGAACGTGATCCAGT-ATGATGAC-TGCTTAAGCACATGG
UCD001_G11_BF292245LD07P001D06D12F1_084.      -TGACGTGATCCAGTTATGATGAC-TGCTTAAGCACATGG
                                                                ****** *********** * *

UCD001_A11_BF292245LD01P001D06D12F1_081.      TTGGGAGAATCACTACTAAGCCTGGAGGAAAGCCAGAAAT
UCD001_D11_BF292245LD04P001D06D12F1_090.      TTGGGAGAATCACTACTAAGCCTGGAGGAAAGCCAGAAAT
UCD001_F11_BF292245LD06P001D06D12F1_091.      TTGGGAGAATCACTACTAAGCCTGGAGGAAAGCCAGAAAT
UCD001_E11_BF292245LD05P001D06D12F1_083.      TTGGGAGAATCACTACTAAGCCTGGAGGAAAGCCAGAAAT
UCD001_H11_BF292245LD08P001D06D12F1_092.      TTGGGAGAATCACTACTAAGCCTGGAGGAAAGCCAGAAAT
UCD001_B11_BF292245LD02P001D06D12F1_089.      TTGGGAGAATCACTACTAAGCCTGGAGGAAAGCCAGAAAT
UCD001_C11_BF292245LD03P001D06D12F1_082.      TTGGGAGAATCACTACTAAGCCTGGAGGAAAGCCAGAAAT
UCD001_G11_BF292245LD07P001D06D12F1_084.      TTGGGAGAATCACTACTAAGCCTGGAGGAAAGCCAGAAAT
                                              ****************************************

UCD001_A11_BF292245LD01P001D06D12F1_081.      GGGTGAAGTGAGTCGTGTGATTTTTACATTGTTCTCCCTG
UCD001_D11_BF292245LD04P001D06D12F1_090.      GGGTGAAGTGAGTCGTGTGATTTTTACATTGTTCTCCCTG
UCD001_F11_BF292245LD06P001D06D12F1_091.      GGGTGAAGTGAGTCGTGTGATTTTTACATTGTTCTCCCTG
UCD001_E11_BF292245LD05P001D06D12F1_083.      GGGTGAAGTGAGTCATGTGATGTT-ACATTGTTCTCCCTG
UCD001_H11_BF292245LD08P001D06D12F1_092.      GGGTGAAGTGAGTCGTGTGATTTTTACATTGTTCTCCCTG
UCD001_B11_BF292245LD02P001D06D12F1_089.      GGGTGAAGTGAGTCGTGTGATTTTTACATTGTTCTCCCTG
UCD001_C11_BF292245LD03P001D06D12F1_082.      GGGTGAAGTGAGTCGTGTGATTTTTACATTGTTCTCCCTG
UCD001_G11_BF292245LD07P001D06D12F1_084.      GGGTGAAGTGAGTCGTGTGATTTTTACATTGTTCTCCCTG
                                              ************** ****** ** ***************

UCD001_A11_BF292245LD01P001D06D12F1_081.      GGCTAAAGTACCATAGTATCCTTGATGATTTTATTGCATT
UCD001_D11_BF292245LD04P001D06D12F1_090.      GGCTAAAGTACCATAGTATCCTTGATGATTTTATTGCATT
UCD001_F11_BF292245LD06P001D06D12F1_091.      GGCTAAAGTACCATAGTATCCTTGATGATTTTATTGCATT
UCD001_E11_BF292245LD05P001D06D12F1_083.      GGCTAAAATACCATAGTCCCCTTGATGATTTCATTGCATT
UCD001_H11_BF292245LD08P001D06D12F1_092.      GGCTAAAGTACCATAGTATCCTTGATGATTTTATTGCATT
UCD001_B11_BF292245LD02P001D06D12F1_089.      GGCTAAAGTACCATAGTATCCTTGATGATTTTATTGCATT
UCD001_C11_BF292245LD03P001D06D12F1_082.      GGCTAAAGTACCATAGTATCCTTGATGATTTTATTGCATT
UCD001_G11_BF292245LD07P001D06D12F1_084.      GGCTAAAGTACCATAGTATCCTTGATGATTTTATTGCATT
                                              ******* *********  ************ ********

UCD001_A11_BF292245LD01P001D06D12F1_081.      GCACTGCATATAAACCTATAAAGAACTGAACTTGAATAAT
UCD001_D11_BF292245LD04P001D06D12F1_090.      GCACTGCATATAAACCTATAAAGAACTGAACTTGAATAAT
UCD001_F11_BF292245LD06P001D06D12F1_091.      GCACTGCATATAAACCTATAAAGAACTGAACTTGAATAAT
UCD001_E11_BF292245LD05P001D06D12F1_083.      GCACTGCATA--AACCTATAAAGAGCTGAGCTTAAACAAC
UCD001_H11_BF292245LD08P001D06D12F1_092.      GCACTGCATATAAACCTATAAAGAACTGAACTTGAATAAT
UCD001_B11_BF292245LD02P001D06D12F1_089.      GCACTGCATATAAACCTATAAAGAACTGAACTTGAATAAT
UCD001_C11_BF292245LD03P001D06D12F1_082.      GCACTGCATATAAACCTATAAAGAACTGAACTTGAATAAT
UCD001_G11_BF292245LD07P001D06D12F1_084.      GCACTGCATATAAACCTATAAAGAACTGAACTTGAATAAT
                                              **********  ************ **** *** ** ** 

UCD001_A11_BF292245LD01P001D06D12F1_081.      CATTCTATTGAGTCTGAACTTTCTTTAGTTTTTGGGGAAA
UCD001_D11_BF292245LD04P001D06D12F1_090.      CATTCTATTGAGTATGAACTTTCTTTAGTTTTTGGGGAAA
UCD001_F11_BF292245LD06P001D06D12F1_091.      CATTCTATTGAGTCTGAACTTTCTTTAGTTTTTGGGGAAA
UCD001_E11_BF292245LD05P001D06D12F1_083.      CATTCTATTGAGTCTGAACTTTCCTTAGTTTTTCGGGAGA
UCD001_H11_BF292245LD08P001D06D12F1_092.      CATTCTATTGAGTCTGAACTTTCTTTAGTTTTTGGGGAAA
UCD001_B11_BF292245LD02P001D06D12F1_089.      CATTCTATTGAGTCTGAACTTTCTTTAGTTTTTGGGGAAA
UCD001_C11_BF292245LD03P001D06D12F1_082.      CATTCTATTGAGTCTGAACTTTCTTTAGTTTTTGGGGAAA
UCD001_G11_BF292245LD07P001D06D12F1_084.      CATTCTATTGAGTCTGAACTTTCTTTAGTTTTTGGGGAAA
                                              ************* ********* ********* **** *

UCD001_A11_BF292245LD01P001D06D12F1_081.      AGT-----AACCAGAGGCTTGTGCATGCAGGCTTCCGTCG
UCD001_D11_BF292245LD04P001D06D12F1_090.      AGT-----AACCAGAGGCTTGTGCTTGCAGGCTTCCGTCG
UCD001_F11_BF292245LD06P001D06D12F1_091.      AGT-----AACCAGAGGCTTGTGCTTGCAGGCTTCCGTCG
UCD001_E11_BF292245LD05P001D06D12F1_083.      AGTGATCTAATCAGAGGCTTGTGCTTGCAGGCTTCCGTCG
UCD001_H11_BF292245LD08P001D06D12F1_092.      AGT-----AACCAGAGGCTTGTGCTTGCAGGCTTCCGTCG
UCD001_B11_BF292245LD02P001D06D12F1_089.      AGT-----AACCAGAGGCTTGTGCTTGCAGGCTTCCGTCG
UCD001_C11_BF292245LD03P001D06D12F1_082.      AGT-----AACCAGAGGCTTGTGCTTGCAGGCTTCCGTCG
UCD001_G11_BF292245LD07P001D06D12F1_084.      AGT-----AACCAGAGGCTTGTGCTTGCAGGCTTCCGTCG
                                              ***     ** ************* ***************

UCD001_A11_BF292245LD01P001D06D12F1_081.      TAGAGCGATACAACAGGCCGCTTCCTAAGGTGAGAACATC
UCD001_D11_BF292245LD04P001D06D12F1_090.      TAGAGCGATACAACAGGCCGCTTCCTAAGGTGAGAACATC
UCD001_F11_BF292245LD06P001D06D12F1_091.      TAGAGCGATACAACAGGCCGCTTCCTAAGGTGAGAACATC
UCD001_E11_BF292245LD05P001D06D12F1_083.      TAGAGCGATACAACAGGCCGCTTCCTAAGGTGAGAACATC
UCD001_H11_BF292245LD08P001D06D12F1_092.      TAGAGCGATACAACAGGCCGCTTCCTAAGGTGAGAACATC
UCD001_B11_BF292245LD02P001D06D12F1_089.      TAGAGCGATACAACAGGCCGCTTCCTAAGGTGAGAACATC
UCD001_C11_BF292245LD03P001D06D12F1_082.      TAGAGCGATACAACAGGCCGCTTCCTAAGGTGAGAACATC
UCD001_G11_BF292245LD07P001D06D12F1_084.      TAGAGCGATACAACAGGCCGCTTCCTAAGGTGAGAACATC
                                              ****************************************

UCD001_A11_BF292245LD01P001D06D12F1_081.      CGAAGCCGAACCTGGGCAGAGCAGGCAGCTACCTCCAGGA
UCD001_D11_BF292245LD04P001D06D12F1_090.      CGAAGCCGAACCTGGGCAGAGCAGGCAGCTACCTCCAGGA
UCD001_F11_BF292245LD06P001D06D12F1_091.      CGAAGCCGAACCTGGGCAGAGCAGGCAGCTACCTCCAGGA
UCD001_E11_BF292245LD05P001D06D12F1_083.      CGAAGCCGAACCTGGGCAGAGCAGGCAGCTACCTCCAGGA
UCD001_H11_BF292245LD08P001D06D12F1_092.      CGAAGCCGAACCTGGGCAGAGCAGGCAGCTACCTCCAGGA
UCD001_B11_BF292245LD02P001D06D12F1_089.      CGAAGCCGAACCTGGGCAGAGCAGGCAGCTACCTCCAGGA
UCD001_C11_BF292245LD03P001D06D12F1_082.      CGAAGCCGAACCTGGGCAGAGCAGGCATCTACCTCCAGGA
UCD001_G11_BF292245LD07P001D06D12F1_084.      CGAAGCCGAACCTGGGCAGAGCAGGCAGCTACCTCCAGGA
                                              *************************** ************

UCD001_A11_BF292245LD01P001D06D12F1_081.      ACCCTGAACGTCGGGCACATCCAGGAGATCATCAATC---
UCD001_D11_BF292245LD04P001D06D12F1_090.      ACCCTGAACGTCGGGCACATCCAGGAGATCATCAATC---
UCD001_F11_BF292245LD06P001D06D12F1_091.      ACCCTGAACGTCGGGCACATCCAGGAGATCATCAATC---
UCD001_E11_BF292245LD05P001D06D12F1_083.      ACCCTGAACGTCGGGCACATCCAGGAGATCATCAATC---
UCD001_H11_BF292245LD08P001D06D12F1_092.      ACCCTGAACGTCGGGCACATCCAGGAGATCATCAATC---
UCD001_B11_BF292245LD02P001D06D12F1_089.      ACCCTGAACGTCGGGCACATCCAGGAGATCATCAATC---
UCD001_C11_BF292245LD03P001D06D12F1_082.      ACCCTGAACGTCGGGCACATCCAGGAGATCATCAATCGCT
UCD001_G11_BF292245LD07P001D06D12F1_084.      ACCCTGAACGTCGGGCACATCCAGGAGATCATCAATCACT
                                              *************************************   

UCD001_A11_BF292245LD01P001D06D12F1_081.      -GAATTCCCGCGGCCGCCATGGCGGCCGGGAGCATGCGAC
UCD001_D11_BF292245LD04P001D06D12F1_090.      -GAATTCCCGCGGCCGCCATGGCGGCCGGGAGCATGCGAC
UCD001_F11_BF292245LD06P001D06D12F1_091.      -GAATTCCCGCGGCCGCCATGGCGGCCGGGAGCATGCGAC
UCD001_E11_BF292245LD05P001D06D12F1_083.      -GAATTCCCGCGGCCGCCATGGCGGCCGGGAGCATGCGAC
UCD001_H11_BF292245LD08P001D06D12F1_092.      -GAATTCCCGCGGCCGCCATGGCGGCCGGGAGCATGCGAC
UCD001_B11_BF292245LD02P001D06D12F1_089.      -GAATTCCCGCGGCCGCCATGGCGGCCGGGAGCATGCGAC
UCD001_C11_BF292245LD03P001D06D12F1_082.      AGTGAATTCGCGGCCGGC-TG-------------------
UCD001_G11_BF292245LD07P001D06D12F1_084.      AGTGAATTCGCGGCCGCC-TGCAGGTCGACCATATGGGAG
                                               *      ******** * **                   

UCD001_A11_BF292245LD01P001D06D12F1_081.      GTCGGGCCCAATTCGCCCTATAGTGAGTCGTATTA-----
UCD001_D11_BF292245LD04P001D06D12F1_090.      GTCGGGCCCAATTCGCCCTATAGTGAGTCGTATTA-----
UCD001_F11_BF292245LD06P001D06D12F1_091.      GTCGGGCCCAATTCGCCCTATAGTGAGTCGTAT-------
UCD001_E11_BF292245LD05P001D06D12F1_083.      GTCGGGCCCAATTCGCCCTATAGTGAGTCGTATTA-----
UCD001_H11_BF292245LD08P001D06D12F1_092.      GTCGGGCCCAATTCGCCCTATAGTGAGTCG----------
UCD001_B11_BF292245LD02P001D06D12F1_089.      GTCAGGCCCAATTCGCCCTATAGTGAG-------------
UCD001_C11_BF292245LD03P001D06D12F1_082.      ----------------------------------------
UCD001_G11_BF292245LD07P001D06D12F1_084.      AGCT--CCCAACGCGTTGGATGCATAGCTTGAGGATTCTA
                                                                                      

UCD001_A11_BF292245LD01P001D06D12F1_081.      --------------------------------
UCD001_D11_BF292245LD04P001D06D12F1_090.      --------------------------------
UCD001_F11_BF292245LD06P001D06D12F1_091.      --------------------------------
UCD001_E11_BF292245LD05P001D06D12F1_083.      --------------------------------
UCD001_H11_BF292245LD08P001D06D12F1_092.      --------------------------------
UCD001_B11_BF292245LD02P001D06D12F1_089.      --------------------------------
UCD001_C11_BF292245LD03P001D06D12F1_082.      --------------------------------
UCD001_G11_BF292245LD07P001D06D12F1_084.      TAGAGTCACGTAAATAGCTGGGGCGTACTCAT