CLUSTAL W (1.83) multiple sequence alignment


UCD001_D08_BG274214LD04P001E05E11F1_062.      ----------CGCCTTGAC--TCATACTCTGGAACCATAT
UCD001_E08_BG274214LD05P001E05E11F1_055.      -----TGCTCCGCCTTGAC--TCATACACTGGAAC-ATAT
UCD001_A08_BG274214LD01P001E05E11F1_053.      GTACTGCTACCGCCTTGACATCCATACTTCCGAACCATAT
UCD001_C08_BG274214LD03P001E05E11F1_054.      GTACTGCTACCGCCTTGACATCCATACCTG-GAACCATAT
UCD001_B08_BG274214LD02P001E05E11F1_061.      GTACTGCTACCGCCTTGAC--TCATACACTGGAACCATAT
UCD001_F08_BG274214LD06P001E05E11F1_063.      ----TGCTACTGCCTGACA--TCCATACTTGGAGCCATG-
UCD001_H08_BG274214LD08P001E05E11F1_064.      --------------------------------AGCCATG-
UCD001_G08_BG274214LD07P001E05E11F1_056.      ----TGCTACTGCCTGACA--TCATACATTGGAGCCATG-
                                                                              * * **  

UCD001_D08_BG274214LD04P001E05E11F1_062.      GCTCCTCTTTCTGCTTCTGAAGCTGTGACTGGCAATCTGA
UCD001_E08_BG274214LD05P001E05E11F1_055.      GCTCCTCTTTCTGCTTCTGAAGCTGTGGCTGGCAATCTGA
UCD001_A08_BG274214LD01P001E05E11F1_053.      GCTCCTCTTTCTGCTTCTGAAGCTGTGACTGGCAATCTGA
UCD001_C08_BG274214LD03P001E05E11F1_054.      GCTCCTCTTTCTGCTTCTGAAGCTGTGACTGGCAATCTGA
UCD001_B08_BG274214LD02P001E05E11F1_061.      GCTCCTCTTTCTGCTTCTGAAGCTGTGACTGGCAATCTGA
UCD001_F08_BG274214LD06P001E05E11F1_063.      GCTCGTCTGTCTGCTTCTGAAACTGTGACTGGCAATCTGA
UCD001_H08_BG274214LD08P001E05E11F1_064.      GCTCGTCTGTCTGCTTCTGAAACTGTGACTGGCAATCTGA
UCD001_G08_BG274214LD07P001E05E11F1_056.      GCTCGTCTGTCTGCTTCTGAAACTGTGACTGGCAATCTGA
                                              **** *** ************ ***** ************

UCD001_D08_BG274214LD04P001E05E11F1_062.      ATCACATGTGGGTCCCACATGTCATACTCACAGCCGGGCA
UCD001_E08_BG274214LD05P001E05E11F1_055.      ATCACATGTGGGTCCCACATGTCATACTCACAGCCGGGCA
UCD001_A08_BG274214LD01P001E05E11F1_053.      ATCACATGTGGGTCCCACATGCCATACTCACAGCCGGGCA
UCD001_C08_BG274214LD03P001E05E11F1_054.      ATCACATGTGGGTCCCACATGTCATACTCACAGCCGGGCA
UCD001_B08_BG274214LD02P001E05E11F1_061.      ATCACATGTGGGTCCCACATGTCATACTCACAGCCGGGCA
UCD001_F08_BG274214LD06P001E05E11F1_063.      ATGGCATGTGGGTTCCACATGCCATACTCACAGCCGGGCA
UCD001_H08_BG274214LD08P001E05E11F1_064.      ATGGCATGTGGGTTCCACATGCCATACTCACAGCCGGGCA
UCD001_G08_BG274214LD07P001E05E11F1_056.      ATGGCATGTGGGTTCCACATGCCATACTCACAGCCGGGCA
                                              **  ********* ******* ******************

UCD001_D08_BG274214LD04P001E05E11F1_062.      GTTTCCAAAGCTACGGACTTGCAATGACATGATCCAAATC
UCD001_E08_BG274214LD05P001E05E11F1_055.      GTTTCCAAAGCTACGGACTTGCAATGACATGATCCAA-TC
UCD001_A08_BG274214LD01P001E05E11F1_053.      GTTTCCAAAGCTACGGACTTGCAATGACATGATCCAAATC
UCD001_C08_BG274214LD03P001E05E11F1_054.      GTTTCCAAAGCTACGGACTTGCAATGACATGATCCAAATC
UCD001_B08_BG274214LD02P001E05E11F1_061.      GTTTCCAAAGCTACGGACTTGCAATGACATGATCCAAATC
UCD001_F08_BG274214LD06P001E05E11F1_063.      GTTTTCAAAGCTACAAACTTGCAATGGCATGATCCAA-TC
UCD001_H08_BG274214LD08P001E05E11F1_064.      GTTTTCAAAGCTACAAACTTGCAATGGCATGATCCAA-TC
UCD001_G08_BG274214LD07P001E05E11F1_056.      GTTTTCAAAGCTACAAACTTGCAATGGCATGATCCAA-TC
                                              **** *********  ********** ********** **

UCD001_D08_BG274214LD04P001E05E11F1_062.      ATTTGGAGTTCGCTGATGTTTTTGTTTTCGTGCAGGGGTC
UCD001_E08_BG274214LD05P001E05E11F1_055.      ATTTGGCGTTCCCTGATGTTTTTGTTTTCGTGCAGGGGTC
UCD001_A08_BG274214LD01P001E05E11F1_053.      ATTTGGAGTTCGCTGATGTTTTTGTTTTCGTGCAGGGGTC
UCD001_C08_BG274214LD03P001E05E11F1_054.      ATTTGGAGTTCGCTGATGTTTTTGTTTTCGTGCAGGGGTC
UCD001_B08_BG274214LD02P001E05E11F1_061.      ATTTGGAGTTCGCTGATGTTTTTGTTTTCGTGCAGGGGTC
UCD001_F08_BG274214LD06P001E05E11F1_063.      ATTTGGCGTTCCCTGATGTTTTTGTTTTGGCGCAGGGGTC
UCD001_H08_BG274214LD08P001E05E11F1_064.      ATTTGGCGTTCCCTGATGTTTTTGTTTTGGCGCAGGGGTC
UCD001_G08_BG274214LD07P001E05E11F1_056.      ATTTGGCGTTCCCTGATGTTTTTGTTCTGGCGCAGGGGTC
                                              ****** **** ************** * * *********

UCD001_D08_BG274214LD04P001E05E11F1_062.      CTGGCATCGCGGTGAT-AACCTTGTCGTGGATCATCACGG
UCD001_E08_BG274214LD05P001E05E11F1_055.      CTGGCATCGCGGTGAT-GACCTTGTCATGGATCATCACGG
UCD001_A08_BG274214LD01P001E05E11F1_053.      CTGGCATCGCGGTGAT-GACCTAGGCGTGAATCATCACGG
UCD001_C08_BG274214LD03P001E05E11F1_054.      CTGGCATCGCGGTGATAGACCTTGTCGTGGATCATCACGG
UCD001_B08_BG274214LD02P001E05E11F1_061.      CTGGCATCGCGGTGAT-GACCTTGTAGTGGATCATCACGG
UCD001_F08_BG274214LD06P001E05E11F1_063.      CTGGCATCGCGGTGATAGACCTTGTCGTGGATCATCACGG
UCD001_H08_BG274214LD08P001E05E11F1_064.      CTGGCATCGCGGTGAT-GACCTTGTAGAGGATAATCACGG
UCD001_G08_BG274214LD07P001E05E11F1_056.      CTAGCATCGCGGTGAT-GACCTTGTCGTGGATCATCACGG
                                              ** *************  **** *    * ** *******

UCD001_D08_BG274214LD04P001E05E11F1_062.      TGTACACGCTGTGGCAGATGGTGGAGATGCATGAGATAGT
UCD001_E08_BG274214LD05P001E05E11F1_055.      TGTACACGCTGTGGCAGATGGTGGAGATGCATGAGATAGT
UCD001_A08_BG274214LD01P001E05E11F1_053.      TGTACACGCTGTGGCAGATGGTGGAGATGCATGAGATAGT
UCD001_C08_BG274214LD03P001E05E11F1_054.      TGTACACGCTGTGGCAGATGGTGGAGATGCATGAGATAGT
UCD001_B08_BG274214LD02P001E05E11F1_061.      TGTACACGCTGTGGCAGATGGTGGAGATGCATGAGATAGT
UCD001_F08_BG274214LD06P001E05E11F1_063.      TGTACACGCTGTGGCAGATGGTGGAGATGCATGAGATAGT
UCD001_H08_BG274214LD08P001E05E11F1_064.      TGTACACGCTGTGGCAGATGGTGGAGATGCATGAGATAGT
UCD001_G08_BG274214LD07P001E05E11F1_056.      TGTACACGCTGTGGCAGATGGTGGAGATGCATGAGATAGT
                                              ****************************************

UCD001_D08_BG274214LD04P001E05E11F1_062.      CCCCGGGAAGCGTTTCGACCGGTACCATGAGCTCGGGCAG
UCD001_E08_BG274214LD05P001E05E11F1_055.      CCCCGGGAAGCGTTTCGACCGGTACCATGAGCTCGGGCAG
UCD001_A08_BG274214LD01P001E05E11F1_053.      CCCTGGGAAGCGTTTCGATCGGTACCATGAGCTCGGGCAG
UCD001_C08_BG274214LD03P001E05E11F1_054.      CCCCGGGAAGCGTTTCGACCGGTACCATGAGCTCGGGCAG
UCD001_B08_BG274214LD02P001E05E11F1_061.      CCCCGGGAAGCGTTTCGACCGGTACCATGAGCTCGGGCAG
UCD001_F08_BG274214LD06P001E05E11F1_063.      CCCTGGGAAGCGTTTCGATCGGTACCATGAGCTCGGGCAG
UCD001_H08_BG274214LD08P001E05E11F1_064.      CCCTGGGAAGCGTTTCGATCGGTACCATGAGCTCGGGCAG
UCD001_G08_BG274214LD07P001E05E11F1_056.      CCCTGGGAAGCGTTTCGATCGGTACCATGAGCTCGGGCAG
                                              *** ************** *********************

UCD001_D08_BG274214LD04P001E05E11F1_062.      CACGCCTTCGGCGATAAGCTCGGCCTCTGGATCGTGGTGC
UCD001_E08_BG274214LD05P001E05E11F1_055.      CACGCCTTCGGCGATAAGCTCGGCCTCTGGATCGTGGTGC
UCD001_A08_BG274214LD01P001E05E11F1_053.      CACGCCTTCGGTGATAAGCTCGGCCTCTGGATCGTGGTGC
UCD001_C08_BG274214LD03P001E05E11F1_054.      CACGCCTTCGGCGATAAGCTCGGCCTCTGGATCGTGGTGC
UCD001_B08_BG274214LD02P001E05E11F1_061.      CACGCCTTCGGCGATAAGCTCGGCCTCTGGATCGTGGTGC
UCD001_F08_BG274214LD06P001E05E11F1_063.      CACGCCTTCGGTGATAAGCTCGGCCTCTGGATCGTGGTGC
UCD001_H08_BG274214LD08P001E05E11F1_064.      CACGCCTTCGGTGATAAGCTCGGCCTCTGGATCGTGGTGC
UCD001_G08_BG274214LD07P001E05E11F1_056.      CACGCCTTCGGTGATAAGCTCGGCCTCTGGATCGTGGTGC
                                              *********** ****************************

UCD001_D08_BG274214LD04P001E05E11F1_062.      CACAGCAGCTTGTCGTCGAGGTCAGCCTGAACATTGTGTA
UCD001_E08_BG274214LD05P001E05E11F1_055.      CACAGCAGCTTGTCGTCGAGGTCAGCCTGAACATTGTGTA
UCD001_A08_BG274214LD01P001E05E11F1_053.      CACAGCAGCTTGTCGTCGAGGTCAGCTTGAACATTGTGTA
UCD001_C08_BG274214LD03P001E05E11F1_054.      CACAGCAGCTTGTCGTCGAGGTCAGCCTGAACATTGTGTA
UCD001_B08_BG274214LD02P001E05E11F1_061.      CACAGCAGCTTGTCGTCGAGGTCAGCCTGAACATTGTGTA
UCD001_F08_BG274214LD06P001E05E11F1_063.      CACAGCAGCTTGTCGTCGAGGTCAGCTTGAACATTGTGTA
UCD001_H08_BG274214LD08P001E05E11F1_064.      CACAGCAGCTTGCCGTCGAGGTCAGCTTGAACATTGTGTA
UCD001_G08_BG274214LD07P001E05E11F1_056.      CACAGCAGCTTGTCGTCGAGGTCAGCTTGAACATTGTGTA
                                              ************ ************* *************

UCD001_D08_BG274214LD04P001E05E11F1_062.      CATGGTTACCGGCGGCAACTCGCTCAAGAAGTTCCACG-A
UCD001_E08_BG274214LD05P001E05E11F1_055.      CATGGTTACCGGCGGCAACTCGCTCAAGAAGTTCCACG-A
UCD001_A08_BG274214LD01P001E05E11F1_053.      CATGGTTACCGGCGGCAACTCTCTCAAGAAGTTCCACGTA
UCD001_C08_BG274214LD03P001E05E11F1_054.      CATGGTTACCGGCGGCAACTCGCTCAAGAAGTTCCACG-A
UCD001_B08_BG274214LD02P001E05E11F1_061.      CATGGTTACCGGCGGCAACTCGCTCAAGAAGTTCCACG-A
UCD001_F08_BG274214LD06P001E05E11F1_063.      CATGGTTACCGGCGGCAACTCTCTCAAGAAGTTCCACG-A
UCD001_H08_BG274214LD08P001E05E11F1_064.      CATGGTTACCGGCGGCAACTCTCTCAAGAAGTTCCACG-A
UCD001_G08_BG274214LD07P001E05E11F1_056.      CATGGTTACCAGCGGCAACTCTCTCAAGAAGTTCCCCG-A
                                              ********** ********** ************* ** *

UCD001_D08_BG274214LD04P001E05E11F1_062.      CGTGATCTGTGACGGCAAGTGCAAGGACATCAA-GCTCAC
UCD001_E08_BG274214LD05P001E05E11F1_055.      CGTGATCTGTGACGGCAAGTGCAAGGACATCAA-GCTCAC
UCD001_A08_BG274214LD01P001E05E11F1_053.      CGTGATCTGTGACGGCAAGTGCAAGGACAT----------
UCD001_C08_BG274214LD03P001E05E11F1_054.      CGTGATCTGTGACGGCAAGTGCAAGGACATCAA-GCTCAC
UCD001_B08_BG274214LD02P001E05E11F1_061.      CGTGATCTGTGACGGCAAGTGCAAGGACATAAA-GCTCAC
UCD001_F08_BG274214LD06P001E05E11F1_063.      CGTGATCTGTGACGGCAAGTGCAAGGACATAAA-GCTCAC
UCD001_H08_BG274214LD08P001E05E11F1_064.      CGTGATCTGTGACGGCAAGTGCAAGGACATAAA-GCTCAC
UCD001_G08_BG274214LD07P001E05E11F1_056.      CGTGATCTGTGACAGCAAGGGCAAGGACATAAAAGCTCAC
                                              ************* ***** **********          

UCD001_D08_BG274214LD04P001E05E11F1_062.      TTACTTCATCATGATCTTCGCCTCTGTCCACTTCGTCCTC
UCD001_E08_BG274214LD05P001E05E11F1_055.      TTACTTCATCATGATCTTCGCCTCTGTCCACTTCGTCCTC
UCD001_A08_BG274214LD01P001E05E11F1_053.      ----------------------------------------
UCD001_C08_BG274214LD03P001E05E11F1_054.      TTACTTCATCATGATCTTCGCCTCTGTCCACTT-------
UCD001_B08_BG274214LD02P001E05E11F1_061.      TTACTTCATCATGATCTTCGCCTCTGTCCACTTCATCCTC
UCD001_F08_BG274214LD06P001E05E11F1_063.      TTACTTCATCATGATCTTCGCCTCTGTCCACTTCGTCCTC
UCD001_H08_BG274214LD08P001E05E11F1_064.      TTACTTCATCATGATCTTCGCCTCTGTCCACTTCGTCCTC
UCD001_G08_BG274214LD07P001E05E11F1_056.      TTACTTCATCAA----------------------------
                                                                                      

UCD001_D08_BG274214LD04P001E05E11F1_062.      TCCCAGCTGCCAAACTTCAGCTCCATCTCGGGCATCTCCC
UCD001_E08_BG274214LD05P001E05E11F1_055.      TCCCAGCTGCCAAACTTCAACTCCATCTCGGGCATCTCCC
UCD001_A08_BG274214LD01P001E05E11F1_053.      ----------------------------------------
UCD001_C08_BG274214LD03P001E05E11F1_054.      ----------------------------------------
UCD001_B08_BG274214LD02P001E05E11F1_061.      TCCCAGCTGCCAA---------------------------
UCD001_F08_BG274214LD06P001E05E11F1_063.      TCACAGCTCCCAAACTTCAACTCCATCTCTGGCATCTCCC
UCD001_H08_BG274214LD08P001E05E11F1_064.      TCCCAGCTCCCAAACTTCAACTCCATCTCTGGCATCTCCC
UCD001_G08_BG274214LD07P001E05E11F1_056.      ----------------------------------------
                                                                                      

UCD001_D08_BG274214LD04P001E05E11F1_062.      TCGCCGCAGCCGTCATGGTCACTCAGCTAAATCACTAGTG
UCD001_E08_BG274214LD05P001E05E11F1_055.      TCACCGCAGCCGTCATG-TCACTCAGCTAAATCACTAGTG
UCD001_A08_BG274214LD01P001E05E11F1_053.      ----------------------------------------
UCD001_C08_BG274214LD03P001E05E11F1_054.      ----------------------------------------
UCD001_B08_BG274214LD02P001E05E11F1_061.      ----------------------------------------
UCD001_F08_BG274214LD06P001E05E11F1_063.      TCGCCGCAGCCGTCATGTCACTCAGCTAAATCACTAGTGA
UCD001_H08_BG274214LD08P001E05E11F1_064.      TCGCTGCAGGC-----------------------------
UCD001_G08_BG274214LD07P001E05E11F1_056.      ----------------------------------------
                                                                                      

UCD001_D08_BG274214LD04P001E05E11F1_062.      AATTCGCGGCCGCCTGCAGGTCGACCATATGGGAGAGCTC
UCD001_E08_BG274214LD05P001E05E11F1_055.      AATTCGCGGCCGCCTGCAGGTCGACCATATGAGAAAGCTC
UCD001_A08_BG274214LD01P001E05E11F1_053.      ----------------------------------------
UCD001_C08_BG274214LD03P001E05E11F1_054.      ----------------------------------------
UCD001_B08_BG274214LD02P001E05E11F1_061.      ----------------------------------------
UCD001_F08_BG274214LD06P001E05E11F1_063.      ATTCGCGGCCGCCTGCAGGTCGACCATATGGGAGAGCTCC
UCD001_H08_BG274214LD08P001E05E11F1_064.      ----------------------------------------
UCD001_G08_BG274214LD07P001E05E11F1_056.      ----------------------------------------
                                                                                      

UCD001_D08_BG274214LD04P001E05E11F1_062.      CCAA---
UCD001_E08_BG274214LD05P001E05E11F1_055.      CCAACGC
UCD001_A08_BG274214LD01P001E05E11F1_053.      -------
UCD001_C08_BG274214LD03P001E05E11F1_054.      -------
UCD001_B08_BG274214LD02P001E05E11F1_061.      -------
UCD001_F08_BG274214LD06P001E05E11F1_063.      CA-----
UCD001_H08_BG274214LD08P001E05E11F1_064.      -------
UCD001_G08_BG274214LD07P001E05E11F1_056.      -------