MUSCLE (3.6) multiple sequence alignment


BE442875Tu01P003B06B12R1_001.ab1      ---------------AGCTGAAGACGGAATGATCACATGTAGAAACTACAGGTTTGAATT
BE442875Ld08P003B06B12R1_085.ab1      ---TTTTCTTGGTAAAGCTAAAGACCGAATGATCATGTGTAGAAGCTACAGG-TTGAATT
BE442875Ld05P003B06B12R1_065.ab1      -CGTTTTCTTGGTAAAGCTGAAGACCGAATGATCATGTGTAGAAGCTACAGG-TTGAATT
BE442875Ld03P003B06B12R1_049.ab1      ----------------GCTGAAGACCGAATGATCATGTGTAGAAGCTACAGG-TTGAATT
BE442875Ld09P003B06B12R1_009.ab1      ACGTTTTCTTGGTAAAGCTGAAGACCGAATGATCATGTGTAGAAGCTACAGG-TTGAATT
BE442875Ld01P003B06B12R1_033.ab1      ---TTTTCTTGGTAAAGCTGAAGACCGAATGATCATGTGTAGAAGCTACAGG-TTGAATT
BE442875Ld06P003B06B12R1_069.ab1      ---TTTTCTTGGTAAAGCTGAAGACCGAATGATCATGTGTAGAAGCTACAGG-TTGAATT
BE442875Ld07P003B06B12R1_081.ab1      ---TTTTCTTGGTAAAGCTGAAGACCGAATGATCATGTGTAGAAGCTACAGG-TTGAATT
BE442875Ld10P003B06B12R1_013.ab1      ---TTTTCTTGGTAAAGCTGAAGACCGAATGATCATGTGTAGAAGCTACAGG-TTGAATT
BE442875Sn25P038E05P003B121R1_07      ---------------------------AATGATC-TGTGTAGAAGCTACAGG-TTGAATT
BE442875Ld02P003B06B12R1_037.ab1      ---TTTTCTTGGTAAAGCTGAAGACCGAATGATCATGTGTAGAAGCTACAGG-TTGAATT
BE442875Ld04P003B06B12R1_053.ab1      --GTTTTCTTGGTAAAGCTGAAGACCGAATGATCATGTGTAGAAGCTACAGG-TTGAATT
                                                                 *******   ******* ******* *******

BE442875Tu01P003B06B12R1_001.ab1      ACATTTCATCAAGTCACAGAAGAAGTACAAAATTTCCTTGAAAGAAAGTTAAAATAGAAA
BE442875Ld08P003B06B12R1_085.ab1      GCATTTCATCAAGTCATGGAAGAGGTGCCAAA-TTCCTTGTAAGAAAGTTAAAATGGAAA
BE442875Ld05P003B06B12R1_065.ab1      GCATTTCATCAAGTCATGGAAGAGGTGCCAAA-TTCCTTGTAAGAAAGTTAAAATGGAAA
BE442875Ld03P003B06B12R1_049.ab1      GCATTTCATCAAGTCATGGAAGAGGTGCCAAA-TTCCTTGTAAGAAAGTTAAAATGGAAA
BE442875Ld09P003B06B12R1_009.ab1      GCATTTCATCAAGTCATGGAAGAGGTGCCAAA-TTCCTTGTAAGAAAGTTAAAATGGAAA
BE442875Ld01P003B06B12R1_033.ab1      GCATTTCATCAAGTCATGGAAGAGGTGCCAAA-TTCCTTGTAAGAAAGTTAAAATGGAAA
BE442875Ld06P003B06B12R1_069.ab1      GCATTTCATCAAGTCATGGAAGAGGTGCCAAA-TTCCTTGTAAGAAAGTTAAAATGGAAA
BE442875Ld07P003B06B12R1_081.ab1      GCATTTCATCAAGTCATGGAAGAGGTGCCAAA-TTCCTTGTAAGAAAGTTAAAATGGAAA
BE442875Ld10P003B06B12R1_013.ab1      GCATTTCATCAAGTCATGGAAGAGGTGCCAAA-TTCCTTGTAAGAAAGTTAAAATGGAAA
BE442875Sn25P038E05P003B121R1_07      GCATTTCATCAAGTCATGGAAGAGGTGCCAAA-TTCCTTTAAGGAAAGTTACAATGGAAA
BE442875Ld02P003B06B12R1_037.ab1      GCATTTCATCAAGTCATGGAAGAGGTGCCAAA-TTCCTTGTAAGAAAGTTAAAATGGAAA
BE442875Ld04P003B06B12R1_053.ab1      GCATTTCATCAAGTCATGGAAGAGGTGCCAAA-TTCCTTGTAAGAAAGTTAAAATGGAAA
                                       ***************  ***** ** * *** ******  * ******** *** ****

BE442875Tu01P003B06B12R1_001.ab1      AGGAAAACACAGTGAGCCAATACTTACCATCACCAAATCCAAAGCATGGTATCAAGTTAT
BE442875Ld08P003B06B12R1_085.ab1      AGCCAAAAACAGTGAGTGAATACTTACCATCACCAAATCCAAAGCATGGTATCAAGTTAT
BE442875Ld05P003B06B12R1_065.ab1      AGCCAAAAACAGTGAGTGAATACTTACCATCACCAAATCCAAAACATGGTATCAAGTTAT
BE442875Ld03P003B06B12R1_049.ab1      AGCCAAAAACAGTGAGTGAATACTTACCATCACCAAATCCAAAGCATGGTATCAAGTTAT
BE442875Ld09P003B06B12R1_009.ab1      AGCCAAAAACAGTGAGTGAATACTTACCATCACCAAATCCAAAGCATGGTATCAAGTTAT
BE442875Ld01P003B06B12R1_033.ab1      AGCCAAAAACAGTGAGTGAATACTTACCATCACCAAATCCAAAGCATGGTATCAAGTTAT
BE442875Ld06P003B06B12R1_069.ab1      AGCCAAAAACAGTGAGTGAATACTTACCATCACCAAATCCAAAGCATGGTATCAAGTTAT
BE442875Ld07P003B06B12R1_081.ab1      AGCCAAAAACAGTGAGTGAATACTTACCATCACCAAATCCAAAGCATGGTATCAAGTTAT
BE442875Ld10P003B06B12R1_013.ab1      AGCCAAAAACAGTGAGTGAATACTTACCATCACCAAATCCAAAGCATGGTATCAAGTTAT
BE442875Sn25P038E05P003B121R1_07      AGCCAAAAACA-------------------------------------------------
BE442875Ld02P003B06B12R1_037.ab1      AGCCAAAAACAGTGAGTGAATACTTACCATCACCAAATCCAAAGCATGGTATCAAGTTAT
BE442875Ld04P003B06B12R1_053.ab1      AGCCAAAAACAGTGAGTGAATACTTACCATCACCAAATCCAAAGCATGGTATCAAGTTAT
                                      **  *** ***                                                 

BE442875Tu01P003B06B12R1_001.ab1      CATCATCAAAAGGTGATAGTGTTCGCCCAATAATAGAAATGGCTTGCTCATATGGATTTG
BE442875Ld08P003B06B12R1_085.ab1      CATCATCAAAAGGTGATAGTGTTCGCCCAATTATAGAGATGGCTTGCTCATATGGATTTG
BE442875Ld05P003B06B12R1_065.ab1      CATCATCAAAAGGTGATAGTGTTCGCCCAATTATAGAGATGGCTTGCTCATATGGATTTG
BE442875Ld03P003B06B12R1_049.ab1      CATCATCAAAAGGTGATAGTGTTCGCCCAATTATAGAGATGGCTTGCTCATATGGATTTG
BE442875Ld09P003B06B12R1_009.ab1      CATCATCAAAAGGTGATAGTGTTCGCCCAATTATAGAGATGGCTTGCTCATATGGATTTG
BE442875Ld01P003B06B12R1_033.ab1      CATCATCAAAAGGTGATAGTGTTCGCCCAATTATAGAGATGGCTTGCTCATATGGATTTG
BE442875Ld06P003B06B12R1_069.ab1      CATCATCAAAAGGTGATAGTGTTCGCCCAATTATAGAGATGGCTTGCTCATATGGATTTG
BE442875Ld07P003B06B12R1_081.ab1      CATCATCAAAAGGTGATAGTGTTCGCCCAATTATAGAGATGGCTTGCTCATATGGATTTG
BE442875Ld10P003B06B12R1_013.ab1      CATCATCAAAAGGTGATAGTGTTCGCCCAATTATAGAGATGGCTTGCTCATATGGATTTG
BE442875Sn25P038E05P003B121R1_07      ------------------------------------------------------------
BE442875Ld02P003B06B12R1_037.ab1      CATCATCAAAAGGTGATAGTGTTCGCCCAATTATAGAGATGGCTTGCTCATATGGATTTG
BE442875Ld04P003B06B12R1_053.ab1      CATCATCAAAAGGTGATAGTGTTCGCCCAATTATAGAGATGGCTTGCTCATATGGATTTG
                                                                                                  

BE442875Tu01P003B06B12R1_001.ab1      GGGTGCGGCTAATGGCATGCAGAGATTCTCCTCCGAAGGAATGCTTACCTACAGAAATCC
BE442875Ld08P003B06B12R1_085.ab1      GGGTGCCACTAATGGCATGCAGAGATTTTCTTCCAAAGGAATGCCTACCTACAGAAATTC
BE442875Ld05P003B06B12R1_065.ab1      GGGTGCCACTAATGGCATGCAGAGATTTTCTTCCAAAGGAATGCCTACCTACAGAAATTC
BE442875Ld03P003B06B12R1_049.ab1      GGGTGCCACTAATGGCATGCAGAGATTTTCTTCCAAAGGAATGCCTACCTACAGAAATTC
BE442875Ld09P003B06B12R1_009.ab1      GGGTGCCACTAATGGCATGCAGAGATTTTCTTCCAAAGGAATGCCTACCTACAGAAATTC
BE442875Ld01P003B06B12R1_033.ab1      GGGTGCCACTAATGGCATGCAGAGATTTTCTTCCAAAGGAATGCCTACCTACAGAAATTC
BE442875Ld06P003B06B12R1_069.ab1      GGGTGCCACTAATGGCATGCAGAGATTTTCTTCCAAAGGAATGCCTACCTACAGAAATTC
BE442875Ld07P003B06B12R1_081.ab1      GGGTGCCACTAATGGCATGCAGAGATTTTCTTCCAAAGGAATGCCTACCTACAGAAATTC
BE442875Ld10P003B06B12R1_013.ab1      GGGTGCCACTAATGGCATGCAGAGATTTTCTTCCAAAGGAATGCCTACCTACAGAAATTC
BE442875Sn25P038E05P003B121R1_07      ------------------------------------------------------------
BE442875Ld02P003B06B12R1_037.ab1      GGGTGCCACTAATGGCATGCAGAGATTTTCTTCCAAAGGAATGCCTACCTACAGAAATTC
BE442875Ld04P003B06B12R1_053.ab1      GGGTGCCACTAATGGCATGCAGAGATTTTCTTCCAAAGGAATGCCTACCTACAGAAATTC
                                                                                                  

BE442875Tu01P003B06B12R1_001.ab1      AGCAGGATACTTATTCAGTTAAACGACAGGGACCCTGTTGGGTAAAACGGCAGATCTGAC
BE442875Ld08P003B06B12R1_085.ab1      AGAAGAATACTTTTCCAGTTAAATGACAGGGACCTTGTTGGGTAGAACAGCAGACCTGAC
BE442875Ld05P003B06B12R1_065.ab1      AGAAGAATACTTTTCCAGTTAAATGACAGGGACCTTGTTGGGTAGAACAGCAGACCTGAC
BE442875Ld03P003B06B12R1_049.ab1      AGAAGAATACTTTTCCAGTTAAATGACAGGGACCTTGTTGGGTAGAACAGCAGACCTGAC
BE442875Ld09P003B06B12R1_009.ab1      AGAAGAATACTTTTCCAGTTAAATGACAGGGACCTTGTTGGGTAGAACAGCAGACCTGAC
BE442875Ld01P003B06B12R1_033.ab1      AGAAGAATACTTTTCCAGTTAAATGACAGGGACCTTGTTGGGTAGAACAGCAGACCTGAC
BE442875Ld06P003B06B12R1_069.ab1      AGAAGAATACTTTTCCAGTTAAATGACAGGGACCTTGTTGGGTAGAACAGCAGACCTGAC
BE442875Ld07P003B06B12R1_081.ab1      AGAAGAATACTTTTCCAGTTAAATGACAGGGACCTTGTTGGGTAGAACAGCAGACCTGAC
BE442875Ld10P003B06B12R1_013.ab1      AGAAGAATACTTTTCCAGTTAAATGACAGGGACCTTGTTGGGTAGAACAGCAGACCTGAC
BE442875Sn25P038E05P003B121R1_07      ------------------------------------------------------------
BE442875Ld02P003B06B12R1_037.ab1      AGAAGAATACTTTTCCAGTTAAATGACAGGGACCTTGTTGGGTAGAACAGCAGACCTGAC
BE442875Ld04P003B06B12R1_053.ab1      AGAAGAATACTTTTCCAGTTAAATGACAGGGACCTTGTTGGGTAGAACAGCAGACCTGAC
                                                                                                  

BE442875Tu01P003B06B12R1_001.ab1      GGTGACAGTGATACAGAAGTAACATTACCTGACCAATCGTTGCTTTTGGTGAAGTCAATG
BE442875Ld08P003B06B12R1_085.ab1      -GTGACAGTGACAAGGAAGTAACATTACCTGACCATTCATTGCTTTTGGTGAAGTCAATA
BE442875Ld05P003B06B12R1_065.ab1      -GTGACAGTGACAAGGAAGTAACATTACCTGACCATTCATTGCTTTTGGTGAAGTCAATA
BE442875Ld03P003B06B12R1_049.ab1      -GTGACAGTGACAAGGAAGTAACATTACCTGACCATTCATTGCTTTTGGTGAAGTCAATA
BE442875Ld09P003B06B12R1_009.ab1      -GTGACAGTGACAAGGAAGTAACATTACCTGACCATTCATTGCTTTTGGTGAAGTCAATA
BE442875Ld01P003B06B12R1_033.ab1      -GTGACAGTGACAAGGAAGTAACATTACCTGACCATTCATTGCTTTTGGTGAAGTCAATA
BE442875Ld06P003B06B12R1_069.ab1      -GTGACAGTGACAAGGAAGTAACATTACCTGACCATTCATTGCTTTTGGTGAAGTCAATA
BE442875Ld07P003B06B12R1_081.ab1      -GTGACAGTGACAAGGAAGTAACATTACCTGACCATTCATTGCTTTTGGTGAAGTCAATA
BE442875Ld10P003B06B12R1_013.ab1      -GTGACAGTGACAAGGAAGTAACATTACCTGACCATTCATTGCTTTTGGTGAAGTCAATA
BE442875Sn25P038E05P003B121R1_07      ------------------------------------------------------------
BE442875Ld02P003B06B12R1_037.ab1      -GTGACAGTGACAAGGAAGTAACATTACCTGACCATTCATTGCTTTTGGTGAAGTCAATA
BE442875Ld04P003B06B12R1_053.ab1      -GTGACAGTGACAAGGAAGTAACATTACCTGACCATTCATTGCTTTTGGTGAAGTCAATA
                                                                                                  

BE442875Tu01P003B06B12R1_001.ab1      CCAAAAATCAGATTTGATGATT--------------------------------------
BE442875Ld08P003B06B12R1_085.ab1      CCGAGAATCAGATTTGATGATTCAAGGCCAGCTTCAATC----GAATTCCCGCGGCCGCC
BE442875Ld05P003B06B12R1_065.ab1      CCGAGAATCAGATTTGATGATTCAAGGCCAGCTTCAATC----GAATTCCCGCGGCCGCC
BE442875Ld03P003B06B12R1_049.ab1      CCGAGAATCAGATTTGATGATTCAAGGCCAGCTTCAATC----GAATTCCCGCGGCCGCC
BE442875Ld09P003B06B12R1_009.ab1      CCGAGAATCAGATTTGATGATTCAAGGCCAGCTTCAATC----GAATTCCCGCGGCCGCC
BE442875Ld01P003B06B12R1_033.ab1      CCGAGAATCAGATTTGATGATTCAAGGCCAGCTTCAATC----GAATTCCCGCGGCCGCC
BE442875Ld06P003B06B12R1_069.ab1      CCGAGAATCAGATTTGATGATTCAAGGCCAGCTTCAATC----GAATTCCCGCGGCCGCC
BE442875Ld07P003B06B12R1_081.ab1      CCGAGAATCAGATTTGATGATTCAAGGCCAGCTTCAATC----GAATTCCCGCGGCCGCC
BE442875Ld10P003B06B12R1_013.ab1      CCGAGAATCAGATTTGATGATTCAAGGCCAGCTTCAATC----GAATTCCCGCGGCCGCC
BE442875Sn25P038E05P003B121R1_07      ------------------------------------------------------------
BE442875Ld02P003B06B12R1_037.ab1      CCGAGAATCAGATTTGATGATTCAAGGCCAGCTTCAATCACTAGTGAATTCGCGGCCGCC
BE442875Ld04P003B06B12R1_053.ab1      CCGAGAATCAGATTTGATGATTCAAGGCCAGCTTCAATCACTAGTGAATTCGCGGCCGCC
                                                                                                  

BE442875Tu01P003B06B12R1_001.ab1      ------------------------------------------------------------
BE442875Ld08P003B06B12R1_085.ab1      ATGGCGGCCGGGAGCATGCGACGTCGGGCCCAATTCG--------------------CCC
BE442875Ld05P003B06B12R1_065.ab1      ATGGCGGCCGGGAGCATGCGACGTCGGGCCCAATTCG--------------------CCC
BE442875Ld03P003B06B12R1_049.ab1      ATGGCGGCCGGGAGCATGCGACGTCGGGCCCAATTCG--------------------CCC
BE442875Ld09P003B06B12R1_009.ab1      ATGGCGGCCGGGAGCATGCGACGTCGGGCCCAATTCG--------------------CCC
BE442875Ld01P003B06B12R1_033.ab1      ATGGCGGCCGGGAGCATGCGACGTCGGGCCCAATTCG--------------------CCC
BE442875Ld06P003B06B12R1_069.ab1      ATGGCGGCCGGGAGCATGCGACGTCGGGCCCAATTCG--------------------CCC
BE442875Ld07P003B06B12R1_081.ab1      ATGGCGGCCGGGAGCATGCGACGTCGGGCCCAATTCG--------------------CCC
BE442875Ld10P003B06B12R1_013.ab1      ATGGCGGCCGGGAGCATGCGACGTCGGGCCCAATTCG--------------------CCC
BE442875Sn25P038E05P003B121R1_07      ------------------------------------------------------------
BE442875Ld02P003B06B12R1_037.ab1      TGCAGGTC---GACCATATGGGAGAGCTCCCAACGCGTTGGATGCATAGCTTGAGTATTC
BE442875Ld04P003B06B12R1_053.ab1      TGCAGGTC---GACCATATGGGAGAGCTCCCAACGCGTTGGATGCATAGCTTGAGTATTC
                                                                                                  

BE442875Tu01P003B06B12R1_001.ab1      --------------------------------
BE442875Ld08P003B06B12R1_085.ab1      TATAGTGAGTCGTAT-----------------
BE442875Ld05P003B06B12R1_065.ab1      TATAGTGAGTCGTATTACAATT----------
BE442875Ld03P003B06B12R1_049.ab1      TATAGTGAGTCGTATTACAATTCAC-------
BE442875Ld09P003B06B12R1_009.ab1      TATAGTGAGTCGTATTACAATT----------
BE442875Ld01P003B06B12R1_033.ab1      TATAGTGAGTCGTATTACAATT----------
BE442875Ld06P003B06B12R1_069.ab1      TATAGTGAGTCGTATTACAATT----------
BE442875Ld07P003B06B12R1_081.ab1      TATAGTGAGTCGTATTACAATTC---------
BE442875Ld10P003B06B12R1_013.ab1      TATAGTGAGTCGTATTACAATTCA--------
BE442875Sn25P038E05P003B121R1_07      --------------------------------
BE442875Ld02P003B06B12R1_037.ab1      TATAGTGTCACCTAAATAGCTTGGCGTAA---
BE442875Ld04P003B06B12R1_053.ab1      TATAGTGTCACCTAAATAGCTTGGCGTAATCA