MUSCLE (3.6) multiple sequence alignment


BE496932At01P129C05P129D111C1      ----------------------GCAGCATTTGATGGAGCGTACCACTTCC-ACATGACGT
BE496932At02P129C05P129D111C1      AGGAGAGTGGGCATACAACATGGCAGCATTTGATGGAGCGTACCACTTCCAACATGACGT
BE496932Tu01P129C05P129D111_P      -----------------------CAGCATTTGATGGAGCGTACCACTTCC-ACATGACGT
BE496932Tu02P129C05P129D111_P      --------------------------------ATGGAGCGTACCACTTCC-ACATGACGT
                                                                   ****************** *********

BE496932At01P129C05P129D111C1      ACAAGGCCTGGAGGCATGAGCCCGAGGTTTGTTTTGTCAATGGGATTCTAGAAAGAGAAA
BE496932At02P129C05P129D111C1      ACAAGGCCTGGAGGCATGAGCCCGAGGTTTGTTTTGTCAATGGGATTCTAGAAAGAGAAA
BE496932Tu01P129C05P129D111_P      ACAAGGCCTGGAGGCATGAGCCCGAGGTTTGTTTTGTCAATGGGATTCTAGAAAGAGAAA
BE496932Tu02P129C05P129D111_P      ACAAGGCCTGGAGGCCTTAGCCCGAGGTTTGTTTTGTCAATGGGATTCTAGAAAGAGAAA
                                   *************** * ******************************************

BE496932At01P129C05P129D111C1      CAGATGCTAAGATATAGTATTTTTATATATAAAAAAGAAGCTTCCTTCATTATAAGAGGT
BE496932At02P129C05P129D111C1      CAGATGCTAAGATATAGTATTTTTATATATAAAAAAGAAGCTTCCTTCATTATAAGAGGT
BE496932Tu01P129C05P129D111_P      CAGATGCTAAGATATAGTATTTTTATATATAAAAAAGAAGCTTCCTTCATTATAAGAGGT
BE496932Tu02P129C05P129D111_P      CAGATGCTAAGATATAGTATTTTTATATATAAAAAAGAAGCTTCCTTCATTATAAGAGGT
                                   ************************************************************

BE496932At01P129C05P129D111C1      AGTATTTGCTTCTTTTCTCAGGTTGGTAGTATAAGCCTCTAAAAGCAAAGAAGAATTTCA
BE496932At02P129C05P129D111C1      AGTATTTGCTTCTTTTCTCAGGTTGGTAGTATAAGCCTCTAAAAGCAAAGAAGAATTTCA
BE496932Tu01P129C05P129D111_P      AGTATTTGCTTCTTTTCTCAGGTTGGTAGTATAAGCCTCTAAAAGCAAAGAAGAATTTCA
BE496932Tu02P129C05P129D111_P      AGTATTTGCTTCTTTTCTCAGGTTGGTAGTATAAGCCTCTAAAAGCAAAGAAGAATTTCA
                                   ************************************************************

BE496932At01P129C05P129D111C1      ACACTTCAAATAAATACCCCATGGACATAGGTTATGAATACTTAAAGTCCAGTAGCGCTC
BE496932At02P129C05P129D111C1      ACACTTCAAATAAATCCCCCATGGACATAGGTTATGAATACTTAAAGTCCAGTAGCGCTC
BE496932Tu01P129C05P129D111_P      ACACTTCAAATAAATACCCCATGGACATAGGTTATGAATACTTAAAGTCCAGTAGCGCTC
BE496932Tu02P129C05P129D111_P      ACACTTCAAATAAATACCCCATGGACATAGGTTATGAATACTTAAAGTCCAGTAGCGCTC
                                   *************** ********************************************

BE496932At01P129C05P129D111C1      TTTTACCCCATGGTAATTTTTTCCTGGCGAAATGGCCTTTTTCTCTCATGGTAATATTAT
BE496932At02P129C05P129D111C1      TTTTACCCCATGGTAATTTTTTCCTGGCGAAATGGCCTTTTTCTCTCATGGTAATATTAT
BE496932Tu01P129C05P129D111_P      TTTTACCCCATGGTAATTTTTTCCTGGCGAAATGGCCTTTTTCTCTCATGGTAATATTAT
BE496932Tu02P129C05P129D111_P      TTTTACCCCATGGTAATTTTTTCCTGGCGAAATGGCCTTTTTCTCTCATGGTAATATTAT
                                   ************************************************************

BE496932At01P129C05P129D111C1      CATGCCATTTTTTTTGCAATGTTATCATGTCATTGACTTGAAGGGGAGCCTTGGCGCAGC
BE496932At02P129C05P129D111C1      CATGCCATTTTTTTTGCAATGTTATCATGTCATTGACTTGAAGGGGAGCCTTGGCGGAGC
BE496932Tu01P129C05P129D111_P      CATGCCATTTTTTTTGCAATGTTATCATGTCATTGACTTGAAGGGGAGCCTTGGCGCAGC
BE496932Tu02P129C05P129D111_P      CATGCCATTTTTTTTGCAATGTTATCATGTCATTGACTTGAAGGGGAGCCTTGGCGCAGC
                                   ******************************************************** ***

BE496932At01P129C05P129D111C1      GGTAAAGCTGTTGCCTTGTGACCATGAGGTCACGGGTTCGAGTCCTGGAAACAGCCTCTT
BE496932At02P129C05P129D111C1      GGTAAAGCTGTTGCCTTGTGACCATGAGGTCACGGGTTCGAGT------------CTCTT
BE496932Tu01P129C05P129D111_P      GGTAAAGCTGTTGCCTTGTGACCATGAGGTCACGGGTTCGAGTCCTGGAAACAGCCTCTT
BE496932Tu02P129C05P129D111_P      GGTAAAGCTGTTGCCTTGTGACCATGAGGTCACGGGTTCGAGTCCTGGAAACAGCCTCTT
                                   *******************************************            *****

BE496932At01P129C05P129D111C1      GCAGAAATGCAGGGAAAGGCTGCGTACTATAGACCCAAAGTGGCCGGACCCTGCGCAAGC
BE496932At02P129C05P129D111C1      GCAGAAATGCAGGGAAAGGCTGCGTACTATAGACCCAAAGTGGCCGGACCCTGCGCAAGC
BE496932Tu01P129C05P129D111_P      GCAGAAATGCAGGGAAAGGCTGCGTACTATAGACCCAAAGTGGCCGGACCCTGCGCAAGC
BE496932Tu02P129C05P129D111_P      GCAGAAATGCAGGGAAAGGCTGCGTACTATAGACCCAAAGTGGCCGGACCCTGCGCAAGC
                                   ************************************************************

BE496932At01P129C05P129D111C1      GGGAGCTACATGCACCGGGCTGCCCTTTTTTTTTTATCATGTCATTGACTTGCTAGTATA
BE496932At02P129C05P129D111C1      GGGAGCTACATGCACCGGGCTGCCC-TTTTTTTTTATCATGTCATTGACTTGCTAGTATA
BE496932Tu01P129C05P129D111_P      GGGAGCTACATGCACCGGGCTGCCCTTTTTTTTTTATCAGGTCATTGACTTGCTAGTAAA
BE496932Tu02P129C05P129D111_P      GGGAGCTACATGCACCGGGCTGCCCTTTTTTTTTTATCAGGCCATTGACTTGCTAGTATA
                                   ************************* ************* * **************** *

BE496932At01P129C05P129D111C1      CCTTTATCCATCTGCTACGTGTTTTGTTAGATTTCGATCTTTTTTTTCTGAAGTTACTTG
BE496932At02P129C05P129D111C1      CCTTTATCCATCTGCTACGTGTTTTGTTAGATTTCGATCTTTTTTTTCTGAAGTTACTTG
BE496932Tu01P129C05P129D111_P      CCTTTATCCATCTGCTACGGGTTTGGTTAAATTTCAATCTTTTTTTTCTGAAGTTCCTTG
BE496932Tu02P129C05P129D111_P      CCTTTATCCATCTGCTACGGGTTTTGTAAAATTTCAATCTTTTTTTTCTGAAGTTCCTTG
                                   ******************* **** ** * ***** ******************* ****

BE496932At01P129C05P129D111C1      ATCGAGAAACTGTAGGAACATGCAGAGAATATATATCATGGCTAAACTGTCAACATCTTG
BE496932At02P129C05P129D111C1      ATCGAGAAACTGTAGGAACATGCAGAGAATATATATCATGGCTAAACTGTCAACATCTTG
BE496932Tu01P129C05P129D111_P      ATCAAAAAACTGTAGGAACTTGCAAAAAATATTTTTCAGGGTTAACCGGCCAACATCTGG
BE496932Tu02P129C05P129D111_P      ATCAAAAAACTGTAGGAACTTGCAAAAAATATATATCAGGGTTAAACGGCCAACATCTGG
                                   *** * ************* **** * ***** * *** ** *** * * ******** *

BE496932At01P129C05P129D111C1      TCATTTAATTTTTCATGTGCAGCGCTCTAATTTGTTCATGTTTTTTTTAGGTGGGACCTA
BE496932At02P129C05P129D111C1      TCATTTAATTTTTCATGTGCAGCGCTCTAATTTGTTCATGTTTTTTTTAGGTGGGACCTA
BE496932Tu01P129C05P129D111_P      CCATTAAATTTTCCAGGGGCAGCGCTCAAATTGGTCCAGGTTTTTTTAAGGGGGGACCTA
BE496932Tu02P129C05P129D111_P      CCATTAAATTTTCCAGGGGCAGCGCTCAAATTGGTCCAGGTTTTTTTAAGGGGGAACCTA
                                    **** ****** ** * ********* **** ** ** ******** *** ** *****

BE496932At01P129C05P129D111C1      TA-----------------------------------------------ATGCA-TGTA-
BE496932At02P129C05P129D111C1      TA-----------------------------------------------ATGCATTGTA-
BE496932Tu01P129C05P129D111_P      TAAGGCTTTGTACCCANNNNNNNNNNCATCCTCGAAATGGTCTGGCTACATGCATTATAG
BE496932Tu02P129C05P129D111_P      TAAGNN-----------------------NNNNNNNNTGGTCTGGCTACATGCATTATAG
                                   **                                               ***** * ** 

BE496932At01P129C05P129D111C1      ------------------------------------------------------------
BE496932At02P129C05P129D111C1      ------------------------------------------------------------
BE496932Tu01P129C05P129D111_P      GTCCCACCTAAAAAACCATTAACAAATTAGAGCGCTGCACATGAAAAATTAAATGACAAG
BE496932Tu02P129C05P129D111_P      GTCCCACCTAAAAAACCTTGAAGGAATTAGAGCGCTGCACATGAAAAATTAAATGACCTG
                                                                                               

BE496932At01P129C05P129D111C1      ------------------------------------------------------------
BE496932At02P129C05P129D111C1      ------------------------------------------------------------
BE496932Tu01P129C05P129D111_P      ATGTTGACAGTTTAGCCATGATATATATTCTCTGCATGTTCCTACAGTTTCTCGATCAAG
BE496932Tu02P129C05P129D111_P      ATGTTGACAGTTTAGCCATGATATATATTCTCTGCATGTTCCTACAGTTTCTCGATCAAG
                                                                                               

BE496932At01P129C05P129D111C1      ------------------------------------------------------------
BE496932At02P129C05P129D111C1      ------------------------------------------------------------
BE496932Tu01P129C05P129D111_P      TAACTTCAGAAAAAAAAGATCGAAATCTAACAAAACACGTAGCAGATGGATAAAGGTATA
BE496932Tu02P129C05P129D111_P      TAACTTCAGAAAAAAAAGATCGAAATCTAACAAAACACGTAGCAGATGGATAAAGGTATA
                                                                                               

BE496932At01P129C05P129D111C1      ------------------------------------------------------------
BE496932At02P129C05P129D111C1      ------------------------------------------------------------
BE496932Tu01P129C05P129D111_P      CTAGCAAGTCAATGACATGATAAAAAAAAAAGGGCACCCCGGGGCAGGTAGCTCCCGTTG
BE496932Tu02P129C05P129D111_P      CTAGCAAGTCAATGACATGATAAAAAAAAAAGGGCACCCCGGGGCAGGTAGCTCCCGTTG
                                                                                               

BE496932At01P129C05P129D111C1      -------GCCAGACCA--------------------------------------------
BE496932At02P129C05P129D111C1      -------GCCAGACCAT-------------------------------------------
BE496932Tu01P129C05P129D111_P      GCGCAGGGCCCGGCCACTTTGGGTCTATAGAACGCAGCCTTTCCCGGCATTTCTGCAAAA
BE496932Tu02P129C05P129D111_P      GCCCAGGGCCCGGCCACTTTGGGTCTATAGAACGCAGCCTTTCCCGGCATTTCTGCAAAA
                                          *** * ***                                            

BE496932At01P129C05P129D111C1      -----TTTCGAG------------------------------------------------
BE496932At02P129C05P129D111C1      -----TTTCGAGGATGCTACTCCTGAACT-------------------------------
BE496932Tu01P129C05P129D111_P      GGCTGTTTCCAGGACTCAAACCCGGGACCTCAGGGTCACAAGGAAACAGTTTTACCGCTG
BE496932Tu02P129C05P129D111_P      GGTTGTTTCCAGGACTCAAACCCGGGACCTCAGGGTCACAAGGAAACAGTTTTACCGTTG
                                        **** **                                                

BE496932At01P129C05P129D111C1      ------------------------------------------------------------
BE496932At02P129C05P129D111C1      ------------------------------------------------------------
BE496932Tu01P129C05P129D111_P      CGCCAAGGCTCCCCTTCAAGTCAAGGACTTGATAACTTTGCAAAAAAAAGGGCTGGATAA
BE496932Tu02P129C05P129D111_P      CGCCAAGGCTCCCCTTCAAGTCAAGGACATGATAACTTTGCAAAAAAAAGGGCTGGATAA
                                                                                               

BE496932At01P129C05P129D111C1      ------------------------------------------------------------
BE496932At02P129C05P129D111C1      ------------------------------------------------------------
BE496932Tu01P129C05P129D111_P      TTTTACCAGGAAAAAAAAGGGCCTTTTCCCCGGGAAAAAATTACCAGGGGGAAAAAAAGC
BE496932Tu02P129C05P129D111_P      TTTTCCCTTGAAAAAAAAGGGCCTTTTCCCCGGGAAAAAATTCCCAGGGGGAAAAAAAGC
                                                                                               

BE496932At01P129C05P129D111C1      ------------------------------------------------------------
BE496932At02P129C05P129D111C1      ----------------------------------------------------GGTTAGAG
BE496932Tu01P129C05P129D111_P      GCTCCGGGACTTTAAGTATTCAAAACCTATGTCCAGGGGGTATTTATTTGAAGGGTGGAA
BE496932Tu02P129C05P129D111_P      GCTCCGGGATTTTAAGTATTCATAACCTATGTCCAGGGGGTATTTATTTAAAGGGTGGAA
                                                                                               

BE496932At01P129C05P129D111C1      ------------------------------------------------------------
BE496932At02P129C05P129D111C1      ATTTCTTCTG--------------------------------------------------
BE496932Tu01P129C05P129D111_P      ATTCTTCTTGGCTTTAAGAGGTTTATACTCCCACCCGGAAAAAAAAAGCAAATACTCCCT
BE496932Tu02P129C05P129D111_P      ATTCTTCTTTGCTTTTAAAGGCTTATACTACCACCCTGAAAAAAAAAGCAAATCCTCCCT
                                                                                               

BE496932At01P129C05P129D111C1      ------------------------------------------------------------
BE496932At02P129C05P129D111C1      ------------------------------------------------------------
BE496932Tu01P129C05P129D111_P      CTTATAAGGAAGGAAGCTTCTTTTTTATATATAAAAATCCTATTTCTAAGCATCGGTTTC
BE496932Tu02P129C05P129D111_P      CTTATAATGAAGGAAGTTTCTTTTTTATATATAAAAATACTATATCTAACCATCGGTTTC
                                                                                               

BE496932At01P129C05P129D111C1      --------------------------------------------
BE496932At02P129C05P129D111C1      --------------------------------------------
BE496932Tu01P129C05P129D111_P      TCTTTCTAAAACCC------------------------------
BE496932Tu02P129C05P129D111_P      TCTTTCTAAAATCCCTTTGACAAAACAAACCTCGGGTTCAGGCC