MUSCLE (3.6) multiple sequence alignment


BE636979At02P003F05F111R1_12.ab1      ----------------------------ATCATATGTATCA----------GGCACTGAT
BE636979Ln02P003F05F111R1_12.ab1      -----------TGAGCAGATGGTACTCCATGATCTCGAACAGCAGCCAGATGGCCGTAGC
BE636979Ln04P003F05F111R1_12.ab1      ------------GAGCAGATGGTACTCCATGATCTCGAACAGCAGCCAGATGGCCGTAGC
BE636979Ln05P003F05F111R1_11.ab1      GGCCCCCAAAGTGAGCAGATGGTACTCCATGATCTCGAACAGCAGCCAGATGGCCGTAGC
BE636979Ln06P003F05F111R1_12.ab1      -----------TGAGCAGATGGTACTCCATGATCTCGAACAGCAGCCAGATGGCCGTAGC
BE636979Ln08P003F05F111R1_12.ab1      ------------GAGCAGATGGTACTCCATGACCTCGAACAGCAGCCAGATGGCAGTAGC
BE636979Tu01P003F05F111R1_11.ab1      -------AAGGTGAGCAGATGGTACTCCATGACCTCGAACAGCAGCCAGATGGCAGTAGC
BE636979Ln03P003F05F111R1_11.ab1      -----------CGAGCAGATGGTACTCCATGACCTCGAACAGCAGCCAGATGGCAGTAGC
BE636979Ln07P003F05F111R1_11.ab1      -----------TGAGCAGATGGTACTCCATGACCTCGAACAGCAGCCAGATGGCAGTAGC
                                                                  ** *  *  * **          ***  *   

BE636979At02P003F05F111R1_12.ab1      GTTTAGAAACAC-----------------TGTTCTGC-----AACAGGTATAG-AACTCC
BE636979Ln02P003F05F111R1_12.ab1      GCCAGCAAGCACCCCTCCTGAGATCTTCTTGTTCCTCCATAGAACAAGATCAGCAGCTGC
BE636979Ln04P003F05F111R1_12.ab1      GCCAGCAAGCACCCCTCCTGAGATCTTCTTGTTCCTCCATAGAACAAGATCAGCAGCTGC
BE636979Ln05P003F05F111R1_11.ab1      GCCAGCAAGCACCCCTCCTGAGATCTTCTTGTTCCTCCATAGAACAAGATCAGCAGCTGC
BE636979Ln06P003F05F111R1_12.ab1      GCCAGCAAGCACCCCTCCTGAGATCTTCTTGTTCCTCCATAGAACAAGATCAGCAGCTGC
BE636979Ln08P003F05F111R1_12.ab1      GCCAGCAAGCACCCCTCCGGAGACCTTCTTGTTCCTCCATAGAACAAGATCAGCAGCTGC
BE636979Tu01P003F05F111R1_11.ab1      GCCAGCAAGCACCCCTCCGGAGACCTTCTTGTTCCTCCATAGAACAAGATCAGCAGCTGC
BE636979Ln03P003F05F111R1_11.ab1      GCCAGCAAGCACCCCTCCGGAGACCTTCTTGTTCCTCCATAGAACAAGATCAGCAGCTGC
BE636979Ln07P003F05F111R1_11.ab1      GCCAGCAAGCACCCCTCCGGAGACCTTCTTGTTCCTCCATAGAACAAGATCAGCAGCTGC
                                      *     ** ***                 *****  *     **** *   ** * ** *

BE636979At02P003F05F111R1_12.ab1      AAGC---------ATTGGCAGGAGTTGTTTCACTGTCTGATGCGTAGGTTGATCCGTCTA
BE636979Ln02P003F05F111R1_12.ab1      AAGC--AAAAATAATTGCAAGCGTTCACATCA--GGCCAAAACACCAGCATAAACATCTA
BE636979Ln04P003F05F111R1_12.ab1      AAGC--AAAAATAATTGCAAGCGTTCACATCA--GGCCAAAACACCAGCATAAACATCTA
BE636979Ln05P003F05F111R1_11.ab1      AAGC--AAAAATAATTGCAAGCGTTCACATCA--GGCCAAAACACCAGCATAAACATCTA
BE636979Ln06P003F05F111R1_12.ab1      AAGC--AAAAATAATTGCAAGCGTTCACATCA--GGCCAAAACACCAGCATAAACATCTA
BE636979Ln08P003F05F111R1_12.ab1      AAGCAAAAAAATAATTGCAAGCGTTCACATCA--GGCCAAAACACCAGAATAAACATCTA
BE636979Tu01P003F05F111R1_11.ab1      AAGCAAAAAAATAATTGCAAGCGTTCACATCA--GGCCAAAACACCAGAATAAACATCTA
BE636979Ln03P003F05F111R1_11.ab1      AAGCAAAAAAATAATTGCAAGCGTTCACATCA--GGCCAAAACACCAGAATAAACATCTA
BE636979Ln07P003F05F111R1_11.ab1      AAGCAAAAAAATAATTGCAAGCGTTCACATCA--GGCCAAAACACCAGAATAAACATCTA
                                      ****         ****  **   *    ***  * *  *  *    *   *  * ****

BE636979At02P003F05F111R1_12.ab1      TGGTGTGTATATGCTC----TCTGCT----TGCACTCAAATTACTTCATTAACTTGTTGT
BE636979Ln02P003F05F111R1_12.ab1      -GGTGGTTAAGCAATCCAGATCTGTTCTACTGCCCCCAGAT--CTTCTCGAGCATAT--T
BE636979Ln04P003F05F111R1_12.ab1      -GGTGGTTAAGCAATCCAGATCTGTTCTACTGCCCCCAGAT--CTTCTCGAGCATAT--T
BE636979Ln05P003F05F111R1_11.ab1      -GGTGGTTAAGCAATCCAGATCTGTTCTACTGCCCCCAGAT--CTTCTCGAGCATAT--T
BE636979Ln06P003F05F111R1_12.ab1      -GGTGGTTAAGCAATCCAGATCTGTTCTACTGCCCCCAGAT--CTTCTCGAGCATAT--T
BE636979Ln08P003F05F111R1_12.ab1      -GGCGGTTAAGCAATCCAGATCTGTTCTACTGCCCCCAGAT--CGTCTGGAGCATAT--T
BE636979Tu01P003F05F111R1_11.ab1      -GGCGGTTAAGCAATCCAGATCTGTTCTACTGCCCCCAGAT--CGTCTGGAGCATAT--T
BE636979Ln03P003F05F111R1_11.ab1      -GGCGGTTAAGCAATCCAGATCTGTTCTACTGCCCCCAGAT--CGTCTGGAGCATAT--T
BE636979Ln07P003F05F111R1_11.ab1      -GGCGGTTAAGCAATCCAGATCTGTTCTACTGCCCCCAGAT--CGTCTGGAGCATAT--T
                                       ** *  **     **    **** *    *** * ** **  * **   * * * *  *

BE636979At02P003F05F111R1_12.ab1      ACATGTATATAGTGAT---------TATCTTCCTTGAATGTAAGAGATGA-AGAAATCTG
BE636979Ln02P003F05F111R1_12.ab1      AGGGGTTTAGAGTGACGACAAACTGTGCCGCCGTTTAACCGTCGCCATTA-CCAAATTCA
BE636979Ln04P003F05F111R1_12.ab1      AGGGGTTTAGAGTGACGACAAACTGTGCCGCCGTTTAACCGTCGCCATTA-CCAAATTCA
BE636979Ln05P003F05F111R1_11.ab1      AGGGGTTTAGAGTGACGACAAACTGTGCCGCCGTTTAACCGTCGCCATTA-CCAAATTCA
BE636979Ln06P003F05F111R1_12.ab1      AGGGGTTTAGAGTGACGACAAACTGTGCCGCCGTTTAACCGTCGCCATTA-CCAAATTCA
BE636979Ln08P003F05F111R1_12.ab1      AGGGGTTCAGAGTGACGACAAACTGCGCCGCCGTTTAACCGTCGCCATTACCCAAATTCA
BE636979Tu01P003F05F111R1_11.ab1      AGGGGTTTAGAGTGACGACAAACTGCGCCGCCGTTTAACCGTCGCCATTACCCAAATTCA
BE636979Ln03P003F05F111R1_11.ab1      AGGGGTTCAGAGTGACGACAAACTGCGCCGCCGTTTAACCGTCGCCATTACCCAAATTCA
BE636979Ln07P003F05F111R1_11.ab1      AGGGGTTCAGAGTGACGACAAACTGCGCCGCCGTTTAACCGTCGCCATTACCCAAATTCA
                                      *   **  * *****             *  * ** **     *  ** *   ****   

BE636979At02P003F05F111R1_12.ab1      ATAACTATA---------TGGTACATGTTGTG------------------TCACAAAGCC
BE636979Ln02P003F05F111R1_12.ab1      ACACACAGACCTTCAGTTTACTGCTTATTATGAACAAACTCTAAACCCTCCAACCAAGCT
BE636979Ln04P003F05F111R1_12.ab1      ACACACAGACCTTCAGTTTACTGCTTATTATGAACAAACTCTAAACCCTCCAACCAAGCT
BE636979Ln05P003F05F111R1_11.ab1      ACACACAGACCTTCAGTTTACTGCTTATTATGAACAAACTCTAAACCCTCCAACCAAGCT
BE636979Ln06P003F05F111R1_12.ab1      ACACACAGACCTTCAGTTTACTGCTTATTATGAACAAACTCTAAACCCTCCAACCAAGCT
BE636979Ln08P003F05F111R1_12.ab1      ACACCCAAACCTTCAGTTTACTGC---TTATGAACAAACTCTAAACCCTCCAATCAAGCT
BE636979Tu01P003F05F111R1_11.ab1      ACACCCAAACCTTCAGTTTACTGC---TTATGAACAAACTCTAAACCCTCCAATCAAGCT
BE636979Ln03P003F05F111R1_11.ab1      ACACCCAAACCTTCAGTTTACTGC---TTATGAACAAACTCTAAACCCTCCAATCAAGCT
BE636979Ln07P003F05F111R1_11.ab1      ACACCCAAACCTTCAGTTTACTGC---TTATGAACAAACTCTAAACCCTCCAATCAAGCT
                                      * *   * *         *  * *   ** **                    *  **** 

BE636979At02P003F05F111R1_12.ab1      TTTTAACGGGGAGAGGGTTG---AACTGAATGCCAGAGAA---------------AACCT
BE636979Ln02P003F05F111R1_12.ab1      TTAGAACAGGCTGATGGCTG--AAATCACATAACCGAGGGTCCTATCGCTTCTATTATCT
BE636979Ln04P003F05F111R1_12.ab1      TTAGAACAGGCTGATGGCTG--AAATCACATAACCGAGGGTCCTATCGCTTCTATTATCT
BE636979Ln05P003F05F111R1_11.ab1      TTAGAACAGGCTGATGGCTG--AAATCACATAACCGAGGGTCCTATCGCTTCTATTATCT
BE636979Ln06P003F05F111R1_12.ab1      TTAGAACAGGCTGATGGCTG--AAATCACATAACCGAGGGTCCTATCGCTTCTATTATCT
BE636979Ln08P003F05F111R1_12.ab1      CTAGAACAGGCTGATAGCTGAGAAATCACATAACCGGGGGTCCTATCGCTTCTCTCATCT
BE636979Tu01P003F05F111R1_11.ab1      CTAGAACAGGCTGATAGCTGAGAAATCACATAACCGAGGGTCCTATCGCTTCTCTCATCT
BE636979Ln03P003F05F111R1_11.ab1      CTAGAACAGGCTGATAGCTGAGAAATCACATAACCGGGGGTCCTATCGCTTCTCTCATCT
BE636979Ln07P003F05F111R1_11.ab1      CTAGAACAGGCTGATAGCTGAGAAATCACATAACCGGGGGTCCTATCGCTTCTCTCATCT
                                       *  *** **  **  * **   **    **  * * *                  * **

BE636979At02P003F05F111R1_12.ab1      TGTAC----ACTAACCATGCTTGTTACG--TGGGTATCTTCCTATACATAAGTAATAA--
BE636979Ln02P003F05F111R1_12.ab1      TATCCTAAAGCTAAAGCTAGTTACTACTACTCCGTACCAAGCAATA---AAGTAACAGTT
BE636979Ln04P003F05F111R1_12.ab1      TATCCTAAAGCTAAAGCTAGTTACTACTACTCCGTACCAAGCAATA---AAGTAACAGTT
BE636979Ln05P003F05F111R1_11.ab1      TATCCTAAAGCTAAAGCTAGTTACTACTACTCCGTACCAAGCAATA---AAGTAACAGTT
BE636979Ln06P003F05F111R1_12.ab1      TATCCTAAAGCTAAAGCTAGTTACTACTACTCCGTACCAAGCAATA---AAGTAACAGTT
BE636979Ln08P003F05F111R1_12.ab1      TATCCTAAAGCTA---------GTTAGGACTCCGTACCAAGCAATAAAGCAGCAACAGTT
BE636979Tu01P003F05F111R1_11.ab1      TATCCTAAAGCTA---------GTTAGGACTCCGTACCAAGCAATAAAGCAGCAACAGTT
BE636979Ln03P003F05F111R1_11.ab1      TATCCTAAAGCTA---------GTTAGGACTCCGTACCAAGCAATAAAGCAGCAACAGTT
BE636979Ln07P003F05F111R1_11.ab1      TATCCTAAAGCTA---------GTTAGGACTCCGTACCAAGCAATAAAGCAGCAACAGTT
                                      * * *     ***           **    *  *** *   * ***    ** ** *   

BE636979At02P003F05F111R1_12.ab1      -------AGACCTACGGCTGAATATACACTTA---------------AATACTAATATAT
BE636979Ln02P003F05F111R1_12.ab1      CCCACTAAAACAAGCGAGACGAAACGCGATCAGATCGAATCGGATCTAACACCAAAGCAT
BE636979Ln04P003F05F111R1_12.ab1      CCCACTAAAACAAGCGAGACGAAACGCGATCAGATCGAATCGGATCTAACACCAAAGCAT
BE636979Ln05P003F05F111R1_11.ab1      CCCACTAAAACAAGCGAGACGAAACGCGATCAGATCGAATCGGATCTAACACCAAAGCAT
BE636979Ln06P003F05F111R1_12.ab1      CCCACTAAAACAAGCGAGACGAAACGCGATCAGATCGAATCGGATCTAACACCAAAGCAT
BE636979Ln08P003F05F111R1_12.ab1      CCCACT-AAACAAGCGAGACGAAACGCGATCAGATCGCAACGGATCTAACACCAAACAAT
BE636979Tu01P003F05F111R1_11.ab1      CCCACT-AAACAAGCGAGACGAAACGCGATCAGATCGCAACGGATCTAACACCAAACAAT
BE636979Ln03P003F05F111R1_11.ab1      CCCACT-AAACAAGCGAGACGAAACGCGATCAGATCGCAACGGATCTAACACCAAACAAT
BE636979Ln07P003F05F111R1_11.ab1      CCCACT-AAACAAGCGAGACGAAACGCGATCAGATCGCAACGGATCTAACACCAAACAAT
                                             * **   **     * *  *  * *               ** ** **   **

BE636979At02P003F05F111R1_12.ab1      GGT--ATGAAGAACTGGAAACACGAA------GAGCTTGATTTCAATACAAAATAGAGTG
BE636979Ln02P003F05F111R1_12.ab1      AATCAATTCCCAATCTGGAACACAGAGCTCGGGGGCTTACGCTTGCCGCCGCCGAGGACG
BE636979Ln04P003F05F111R1_12.ab1      AATCAATTCCCAATCTGGAACACAGAGCTCGGGGGCTTACGCTTGCCGCCGCCGAGGACG
BE636979Ln05P003F05F111R1_11.ab1      AATCAATTCCCAATCTGGAACACAGAGCTCGGGGGCTTACGCTTGCCGCCGCCGAGGACG
BE636979Ln06P003F05F111R1_12.ab1      AATCAATTCCCAATCTGGAACACAGAGCTCGGGGGCTTACGCTTGCCGCCGCCGAGGACG
BE636979Ln08P003F05F111R1_12.ab1      AATCAATTCCCAATCTGGAGCACAGGGCTCGGGGGCTTACGCTTGCCGCCGCCGAGGACG
BE636979Tu01P003F05F111R1_11.ab1      AATCAATTCCCAATCTGGAGCACAGGGCTCGGGAGCTTACGCTTGCCGCCGCCGAGGACG
BE636979Ln03P003F05F111R1_11.ab1      AATCAATTCCCAATCTGGAGCACAGGGCTCGGGGGCTTACGCTTGCCGCCGCCGAGGACG
BE636979Ln07P003F05F111R1_11.ab1      AATCAATTCCCAATCTGGAGCACAGGGCTCGGGGGCTTACGCTTGCCGCCGCCGAGGACG
                                        *  **    **   * * ***         * ****    *     *     **   *

BE636979At02P003F05F111R1_12.ab1      GTATGTAACATGTTGTTTATCCCTCTGC-----------------TTATATCATTCTAAT
BE636979Ln02P003F05F111R1_12.ab1      GCGTG-GACGGGCT-----TCTCGCGGCCGAAGAGGCGGTAGATCTTGAATCA--CTAGT
BE636979Ln04P003F05F111R1_12.ab1      GCGTG-GACGGGCT-----TCTCGCGGCCGAAGAGGCGGTAGATCTTGAATCA--CTAGT
BE636979Ln05P003F05F111R1_11.ab1      GCGTG-GACGGGCT-----TCTCGCGGCCGAAGAGGCTGTAGATCTTGAATCA--CTAGT
BE636979Ln06P003F05F111R1_12.ab1      GCGTG-GACGGGCT-----TCTCGCGGCCGAAGAGGCTGTAGATCTTGAATCA--CTAGT
BE636979Ln08P003F05F111R1_12.ab1      GCGTG-GACGGGCT-----TCTCGCGGCCGAAGAGGCGGTAGATCTTGAATC--------
BE636979Tu01P003F05F111R1_11.ab1      GCGTG-GACGGGCT-----TCTCGCGGCCG------------------------------
BE636979Ln03P003F05F111R1_11.ab1      GCGTG-GACGGGCT-----TCTCGCGGCCGAAGAGGCGGTAGATCTTGAATCA--CTAGT
BE636979Ln07P003F05F111R1_11.ab1      GCGTG-GACGGGCT-----TCTCGCGGCCGAAGAGGCGGTAGATCTTGAATCA--CTAGT
                                      *  **  **  * *     ** * * **                                

BE636979At02P003F05F111R1_12.ab1      AACATCTTGCAACCTCCTTTCATCTGAATTACA----AATGCGCATGACATGATCTATCT
BE636979Ln02P003F05F111R1_12.ab1      GAATT--CGCGGCCGCC-TGCAGGTCGACCATATGGGAGAGCTCCC-ACGCGTTGGATGC
BE636979Ln04P003F05F111R1_12.ab1      GAATT--CGCGGCCGCC-TGCAGGTCGACCATATGGGAGAGCTCCCCACGCGTTGGATGC
BE636979Ln05P003F05F111R1_11.ab1      GAATT--CGCGGCCGCC-TGCAGGTCGACCATATGGGAGAGCTCCC-ACGCGTTGGATGC
BE636979Ln06P003F05F111R1_12.ab1      GAATT--CGCGGCCGCC-TGCAGGTCGACCATATGGGAGAGCTCCCAACGCGTTGGATGC
BE636979Ln08P003F05F111R1_12.ab1      GAATTCCCGCGGCCGCCATGGCGGCCGGGAGCATGCGA------------CGTCGGGCCC
BE636979Tu01P003F05F111R1_11.ab1      ------------------------------------------------------------
BE636979Ln03P003F05F111R1_11.ab1      GAATT--CGCGGCCGCC-TGCAGGTCGACCATATGGGAGAGCTCCC-ACGCGTTGGATGC
BE636979Ln07P003F05F111R1_11.ab1      GAATT--CGCGGCCGCC-TGCAGGTCGACCATATGGGAGAGCTCCCAACGCGTTGGATGC
                                                                                                  

BE636979At02P003F05F111R1_12.ab1      TCT-----------------------------
BE636979Ln02P003F05F111R1_12.ab1      ATAGC---------------------------
BE636979Ln04P003F05F111R1_12.ab1      ATAGCTTGAGTATCTATAGTGT----------
BE636979Ln05P003F05F111R1_11.ab1      ATAG----------------------------
BE636979Ln06P003F05F111R1_12.ab1      ATAGC---------------------------
BE636979Ln08P003F05F111R1_12.ab1      ATT-----------------------------
BE636979Tu01P003F05F111R1_11.ab1      --------------------------------
BE636979Ln03P003F05F111R1_11.ab1      ATAGCTTGAGTATCTATAGTGTCACCTAATAG
BE636979Ln07P003F05F111R1_11.ab1      ATAGC---------------------------