MUSCLE (3.6) multiple sequence alignment BF429128Tu01P078D05P078D111C1 ------------------------------------------------------------ BF429128Tu02P078D05P078D111C1 ------------------------------------------------------------ BF429128As02P078D05P078D111C1 -------------------GGAGGTATGTACCCACCATTAGCTTCCTATTATTAGCATGC BF429128As01P078D05P078D111C1 GAGAATTTAGCCTGATAATGGAGGTATGTACCCACCGTTAGCTTCATAATAGTAGCATGC BF429128Tu01P078D05P078D111C1 --------------------------------------------TTATTGCTGCTGAATC BF429128Tu02P078D05P078D111C1 ------------------------------------------------------------ BF429128As02P078D05P078D111C1 TAAAAGGTTTCCCTTATTATTATTATTATTTATTTATTTTCTCTTTATTGCTCCTGAATC BF429128As01P078D05P078D111C1 TAAAAGGTTTCCCTTATTATGATTATTATTTATTTATTTTCTCTTTATTGCTCCTGAATC BF429128Tu01P078D05P078D111C1 AGAGATACATAGACAAATAATATGATTATGAACAAGTTAGTTTCTTTCTCAGCTGATACC BF429128Tu02P078D05P078D111C1 --------ATAGACAAATAATATGATGATGAACAAGTTAGTTTCTTTCTCAGCTGATACC BF429128As02P078D05P078D111C1 AGAGATTCCGAGGCAACTAATATGATTATGGACAAGTATGTTTCTTTCTCAGCTGATACC BF429128As01P078D05P078D111C1 AGAGATTCAGAGGCAACTAATATGATTATGGACAAGTATGTTTCTTTCTCAGCTGATACC ** *** ********* *** ****** ********************* BF429128Tu01P078D05P078D111C1 CTCTTAATAGCATGTGACCGAATTAGAACGGCTGGTCGAATTGGTTGGCAAACCTAT-TT BF429128Tu02P078D05P078D111C1 CTCTTAATAGCATGTGACCGAATTAGAACAGCTGGTCAAATTGGTTGGCAAACCTATTTT BF429128As02P078D05P078D111C1 CTTTCAATACCATGTGACTGAATGAGAACAGCTGGTCAAATTGGTTGGCAAACCTGTGTT BF429128As01P078D05P078D111C1 CTTTCAATACCATGTGACTGAGTGGGAGCAGCTGGTCAAATTGGTTGGCAAACCTGTGTT ** * **** ******** ** * ** * ******* ***************** * ** BF429128Tu01P078D05P078D111C1 TCCTTTTTTTTGTTGCTTTGTCACTGTTAAACATTTATTCTTTCACCTACCATACATGTT BF429128Tu02P078D05P078D111C1 CCTTTTTTTTTGTTGCTTTGCCACTGTTAAACATTTATTCTTTCCCCTACCATACATGTT BF429128As02P078D05P078D111C1 TCCCCTTTTTCTTAGCTTTGTCACTGTTAAAC-------CTTTCACCTACCATACATCTT BF429128As01P078D05P078D111C1 TCCCCTTTTTCTTAGCTTTGTCACTGTTAAAC-------CTTTCACCTACCATACATCTT * ***** * ****** *********** ***** ************ ** BF429128Tu01P078D05P078D111C1 TGACTGAGCAAC-GGATTCTTGA-TTTTCCAACGAGCTCACATATGAAATGTCCTTCGCC BF429128Tu02P078D05P078D111C1 TGACTGAGCAAC-GGATTCTTGA-TTTTCCAACGAGCTCCCATATGAAATGTCCTTCGCC BF429128As02P078D05P078D111C1 TGACTGAGCAACTGAATTATTGACTTTTCCAAGTAGTTAACATATGAAATGTCCTTCGTC BF429128As01P078D05P078D111C1 TGACTGAGCAACTGAATTATTGACTTTTCCAAGTAGTTAACATATGAAATGTCCTTCGTC ************ * *** **** ******** ** * ****************** * BF429128Tu01P078D05P078D111C1 CTAAAGGGAAAACCA-TTTTCTCTTCTTTTTGCCAAGTCAGCTTCTAGATGCAAACTTGT BF429128Tu02P078D05P078D111C1 CTAAAGGGAAAACCA-TTTTCTCTTCTTTTTGCCAAGTCAGCTTCTAAATGCAAACTTGT BF429128As02P078D05P078D111C1 CTAGCGGGAAACCCATTTTTCTCTTCTTTCTGCCAAGGCAGCTTCTAGCTGCAAACTTGT BF429128As01P078D05P078D111C1 CTAGCGGGAAACCCATTTTTCTCTTCTTTCTGCCAAGGCAGCTTCTAGCTGCAAACTTGT *** ****** *** ************* ******* ********* *********** BF429128Tu01P078D05P078D111C1 CCAACTTTTGGCTTGCATGGGATGAAATCCTTAAAAGATATCAAAGAAAGAAGCCTTCCA BF429128Tu02P078D05P078D111C1 CCAACTTTTGGCTTGCAGGGGATGAAATCCTTAAAAGATATCAAAGAAAGAAGCCTTCCA BF429128As02P078D05P078D111C1 CCAACTTTTGGCTTGCATGGGATAAAATCCT--AAAGATATCAAAGAAAGAAGGCTTCCA BF429128As01P078D05P078D111C1 CCAACTTTTGGCTTGCATGGGATAAAATCCT--AAAGATATCAAAGAAAGAAGGCTTCCA ***************** ***** ******* ******************** ****** BF429128Tu01P078D05P078D111C1 GTTCCTACCTTGACACATAAAATCTTATGATTTTCCTTGCATCCTACTTTCTTGTTGATG BF429128Tu02P078D05P078D111C1 GTTCCTACCGTGACACATAAAATCTTATGATTTTCCTTGCATCCTACTTTCTTGTTGATG BF429128As02P078D05P078D111C1 GTTCCTACAGTGACACATAAAATCTTATGATTTTCCTTGCATCCTACTTTCTTGTTGATG BF429128As01P078D05P078D111C1 GTTCCTACAGTGACACATAAAATCTTATGATTTTCCTTGCATCCTACTTTCTTGTTGATG ******** ************************************************** BF429128Tu01P078D05P078D111C1 CAGTGTAGCTGCATCATGTTTCAACTCCAATGTTATGTATATAT---------------- BF429128Tu02P078D05P078D111C1 CAGTGTAGCTGCATCATGTTTCAACTCCAATGTTATGTATATAT---------------- BF429128As02P078D05P078D111C1 CAGTGGAGCTATGT----TTTCAACTCCAATGTTATGTATCTTTTTGTCCAAAGTGGGCA BF429128As01P078D05P078D111C1 CAGTGGAGCTATGT----TTTCAACTCCAATGTTATGTATCTTTTTGTCCAAAGTGGGCA ***** **** * ********************** * * BF429128Tu01P078D05P078D111C1 -----------------------------CTTTTTGTCCT--AACACCTTGAGACACCAA BF429128Tu02P078D05P078D111C1 -----------------------------CTTTTTGTCCT--AACACCTTGAGACACCAA BF429128As02P078D05P078D111C1 AAAGCTGGAGTGGCAAAAACAAAGTTTTCCCTTTTGTCCCAAAACACCTTGAGACACC-- BF429128As01P078D05P078D111C1 AAAGCTGGAGTGGCAAAAACAAAGTTTTCCCTTTTGTCCCAAAACACCTTGAGACACC-- * ******** **************** BF429128Tu01P078D05P078D111C1 TTTGAGTGAAGAAATTTGGAGAACCCACTTTTGATTGTTCACGCAAACAGCCATCCTATA BF429128Tu02P078D05P078D111C1 TTTGAGTGAAGAAATTTGGAGAACCCACTTTTGATTGTTCACGCAAACAGCCATCCTATA BF429128As02P078D05P078D111C1 ------------AATTTGGAGAACCCCCTTTTGACTGTTCACGCAAATAGCCATCTTATA BF429128As01P078D05P078D111C1 ------------AATTTGGAGAACCCCCTTTTGACTGTTCACGCANATAGCCATCTTATA ************** ******* ********** * ******* **** BF429128Tu01P078D05P078D111C1 AGGTTTCAACTCCAATGTTATATTCTTCGCATCCTAATTCACCATTGAGGCAGTTAGGAT BF429128Tu02P078D05P078D111C1 AGGTTTCAACTCCAATGTTATATTCTTCGCATCCTAATTCACCATTGAGGCAGTTAGGAT BF429128As02P078D05P078D111C1 AGGTTTCAACTCCAATGTTATATTCTTCGCATCCTAATTCACCATGGAGGCAATTAGGAT BF429128As01P078D05P078D111C1 AGGTTTCAACTCCAATGTTATATTCTTCGCATCCTAATTCACCATGGAGGCAATTAGGAT ********************************************* ****** ******* BF429128Tu01P078D05P078D111C1 GCATCGTGCCCCGTAACCTTTCCTTATGCAAGTAAAATCTTTTGTTC-AAATACTTTGTG BF429128Tu02P078D05P078D111C1 GCATCGTGCCCCGTAACCTTTCCTTATGCAAGTAAAATCTTTTGTTC-AAATACTTTGTG BF429128As02P078D05P078D111C1 GCATCGTTCCCCGTAACCTTTCCTTACGCAAGTAAAATCATCTGTTCAAAACACTTTGTG BF429128As01P078D05P078D111C1 GCATCGTTCCCCGTAACCTTTCCTTACGCAAGTAAAATCATCTGTTCAAAACACTTTGTG ******* ****************** ************ * ***** *** ******** BF429128Tu01P078D05P078D111C1 GGAAGCACTACCCAACAAAAGCTTTGCGGCTCGATGCATTGCTAGAAGAAAACGTTATTT BF429128Tu02P078D05P078D111C1 GGAAGCACTACCCAACAAAAGCTTTGCGGCTCGATGCATTGCTAGAAGAAAACGTTATTT BF429128As02P078D05P078D111C1 GGAAGCACTACCCAACAAAAGCTTTGCGGCTCGATGCGTTG---------GAAGTTATTT BF429128As01P078D05P078D111C1 GGAAGCACTACCCAACAAAAGCTTTGCGGCTCTATGCGTTG---------GAAGTTATTT ******************************** **** *** * ******* BF429128Tu01P078D05P078D111C1 ACAAGCCCGAGAAGAGGCCAACAGCCTAGAGTACAATGCTCCATTTGTCCTGGCAAGCGG BF429128Tu02P078D05P078D111C1 ACAAGCCCGAGAAGAGGCCAACAGCCTAGAGTACAATGCTCCATTTGTCCTGGCAAGCGG BF429128As02P078D05P078D111C1 ACAAGCCTGAGAAGCG------AGCCCAGAGTATAATGCTTCATTTGCCTTGGCAAGCGG BF429128As01P078D05P078D111C1 ACAAGCCTGAGAAGCG------AGCCCAGAGTATAATGCTTCATTTGCCTTGGCAAGCGG ******* ****** * **** ****** ****** ****** * ********** BF429128Tu01P078D05P078D111C1 GCCAGATGTAGAACTTGACCCGCAGAGGGCCCACGTGCTAGCTTCCAATATCTAGATACA BF429128Tu02P078D05P078D111C1 GCCAGATGTAGAACTTGACCCGCAGAGGGCCCACGTGCTAGCTTCCAATATCTAGATACA BF429128As02P078D05P078D111C1 GCCAGATGTGGAACTTAACCCGC------------------------------------- BF429128As01P078D05P078D111C1 GCCAGATGTGGAACTTAACCCGC------------------------------------- ********* ****** ****** BF429128Tu01P078D05P078D111C1 ATCGGCCCCTGGAAGAGGGTCTTGTGGCAGGACTTAAAAATACTGAGGGTGCCACACAGT BF429128Tu02P078D05P078D111C1 ATCGGCCCCTGGAAGAGGGTCTTGTGGCAGGACTTAAAAATACTGAGGGTGCCACACAGT BF429128As02P078D05P078D111C1 ----------GGTAGAGGGTCTTGTGGGAGGACTTAAAAATACTGAGCGTG-CACATACT BF429128As01P078D05P078D111C1 ----------GGTAGAGGGTCTTGTGGGAGGACTTAAAAATACTGAGCGTG-CACATACT ** ************** ******************* *** **** * * BF429128Tu01P078D05P078D111C1 TACCTCTGT-GTACATGACTATGATGGAAGCACCT-TGCACAAATGAAATTTCGAGAGCT BF429128Tu02P078D05P078D111C1 TACCTCTGT-GTACATGATTATGATGGAAGCACCT-TGCACAAA---------------- BF429128As02P078D05P078D111C1 TACCTCTGTAGTACATGACTATGGTGGAAGCACCTATGCGCAAATGGAATTTCAAGAACT BF429128As01P078D05P078D111C1 TACCTCTGTAGTACATGACTATGGTGGAAGCACCTATGCGCAAATTGAATTTCAAGAACT ********* ******** **** *********** *** **** BF429128Tu01P078D05P078D111C1 TTTGTTAGTTCAGCACTTTTGTGTTATAAAAATAATTTGTTGCGGCATTT---------- BF429128Tu02P078D05P078D111C1 ------------------------------------------------------------ BF429128As02P078D05P078D111C1 TTTGCTAGTTCAGCAGTTTTGTGTT---AAAAATATTTGTT-CTGCATCTTCTTGATTAT BF429128As01P078D05P078D111C1 TTTGCTAGTTCAGCACTTTTGTGTT---AAAAATATTTGTT-CTGCATCTTCTTGATTAT BF429128Tu01P078D05P078D111C1 ---------------------------------------------- BF429128Tu02P078D05P078D111C1 ---------------------------------------------- BF429128As02P078D05P078D111C1 AAGGCTTTTCAACTTGTTCATTGTAAAAATTTCAGAGGGTCCGGAG BF429128As01P078D05P078D111C1 TATGCTTACCAACTTGTTCA--------------------------