MUSCLE (3.6) multiple sequence alignment


BF483101As01P003D03D09R1_062.ab1      -----------------------------------------------ATCA------CTA
BF483101Tu01P003D03D09R1_058.ab1      TATTTTGCATGTTCAACTCCTTAGATGGATCCACAAAGTCATCATCCATCAGAGATGCTA
BF483101At02P003D03D09R1_078.ab1      ----------GTTCAACTCCTTAGATGGATCCACAAAGTCATCATCCATCAGAGATGCTA
                                                                                     ****      ***

BF483101As01P003D03D09R1_062.ab1      GTG---------------------------------------------------------
BF483101Tu01P003D03D09R1_058.ab1      ATGCTGAAGCTCTTTTTGACCAATCTAAACGACGATACGTGGATATTTTCATGTTGGGTA
BF483101At02P003D03D09R1_078.ab1      ATGATGAAGCTCTTTTTGACCAATCTAAACGACGATACGTGGATATTTTCATGTTGGGTA
                                       **                                                         

BF483101As01P003D03D09R1_062.ab1      -----------------------------------------------AATTCGCGGCCGC
BF483101Tu01P003D03D09R1_058.ab1      CTTCATTTTCTAGATTCTTAAGTATCTCGGACAAAGTTTTTTCTTCCAGCTCTCCATTGC
BF483101At02P003D03D09R1_078.ab1      CTTCATTTTCTAGATTCTTAAGTATCTCGGACAAAGTTTTTTCTTCCAGCTCTCCATTGC
                                                                                     *  ** *    **

BF483101As01P003D03D09R1_062.ab1      CTGCAGG---------------------------TCGACCAT-------ATGG-------
BF483101Tu01P003D03D09R1_058.ab1      CCGCAAGCATCCTTGGCCTTTTAGCAATACCAGATTCACCATCATGGAGATGGTTAAGAA
BF483101At02P003D03D09R1_078.ab1      CCGCAGGCATCCTTGGCCTTTTAGCAATACCAGATTCACCATCATGGAGATGGTTAAGAA
                                      * *** *                           *  *****       ****       

BF483101As01P003D03D09R1_062.ab1      ----------------------------------------------------GAGAG---
BF483101Tu01P003D03D09R1_058.ab1      CTTCGGCTTCTAGATGAGGAAAGAATCTTCTTTTCTGGTCAGTGAAGGCCTTGAGAGCTA
BF483101At02P003D03D09R1_078.ab1      CTTCGTCTTCTAGATGAGGAAAGAATCTTCTTTTCTGGTCAGTGAAGGCCTTGAGAGCTA
                                                                                          *****   

BF483101As01P003D03D09R1_062.ab1      -----------------------------------------------CTCCCAACGCGTT
BF483101Tu01P003D03D09R1_058.ab1      ACCTGAAAACAACATTGAAACAAGATGAATCCCAAACCAAAAGCTTCCTCCCAAGTTTTT
BF483101At02P003D03D09R1_078.ab1      ACCTGAAAACAACATTGAAACAAGATGAATCCCAAACCAAAAGCTTCCTCCCAAGTTTTT
                                                                                     *******    **

BF483101As01P003D03D09R1_062.ab1      GGATGCATAGC-------------------------------------------------
BF483101Tu01P003D03D09R1_058.ab1      AGGTATATAGCACTTAGAAATTGTATGCATGAAAAAAGTAAGAAATAACATCGGGAGAGC
BF483101At02P003D03D09R1_078.ab1      AGGTATATAGCACTTAGAAATTGTATGCATGAAAAAA-TAAGAAATAATATCGGGAGAGC
                                       * *  *****                                                 

BF483101As01P003D03D09R1_062.ab1      ---------------------------------------------TGGAGG---------
BF483101Tu01P003D03D09R1_058.ab1      AATTTCTCCATTTAGGCATAAATCAGTGGGCAGCATAACCACATATAAAGGGAGGGAGGG
BF483101At02P003D03D09R1_078.ab1      AATTCCTCCATTTAGGCATAAACCAGTACGC-GCATAACCACATATAGAGGGAGTGAGTG
                                                                                   *  ***         

BF483101As01P003D03D09R1_062.ab1      ---------------------------ATTCTGTAGTGTCAC------------------
BF483101Tu01P003D03D09R1_058.ab1      AGTGAGAGATCCAGAAATTATCATCGTATTTTAGAGAGTAACACTATACAAAAAACATTG
BF483101At02P003D03D09R1_078.ab1      AGTGAGAGATCCAGAAATTATCATCGTATTTTAGAGAGTAACACTATACAAAAAACATTG
                                                                 *** *  ** ** **                  

BF483101As01P003D03D09R1_062.ab1      ------------------------------------------------------------
BF483101Tu01P003D03D09R1_058.ab1      AATATACATTCAATTGATTGTATGGTTGGCCATGTTCACCAAGGCGTTAGGCGCTAGTCG
BF483101At02P003D03D09R1_078.ab1      AATATACATTCAATTGATTGTATGGTTGGCCATGTTCACCAAGGCGTTAGGCGCAAGTCG
                                                                                                  

BF483101As01P003D03D09R1_062.ab1      ------------------------------CTAAATAGCTTGGCGTACTCATGGTC----
BF483101Tu01P003D03D09R1_058.ab1      GTCTGTAAAACAGTGCCTAGCACCTAATTGCTGAATAGGCAAGCAGGCTAGGGGCCCACC
BF483101At02P003D03D09R1_078.ab1      GGCTGTAAAACAGTGCCTAGCACCTAATTGCTGAATAGGCAAGCAGGCTAGGGGCCCGCC
                                                                    ** *****    **   **   ** *    

BF483101As01P003D03D09R1_062.ab1      -------------ATAGCTGTGT-------------------------------------
BF483101Tu01P003D03D09R1_058.ab1      TGGGTGGGATAAACTGGCTAGGTGACAGGGCGTCGCCTAGCATCAAGGTGGGCTTGTCAG
BF483101At02P003D03D09R1_078.ab1      TGGGTGGGATAAACTGGCTAGGTGACAGGGCGTCGCCTAGCATCAAGGTGGGCTTGTCAG
                                                    * ***  **                                     

BF483101As01P003D03D09R1_062.ab1      ------------------------------------------------------------
BF483101Tu01P003D03D09R1_058.ab1      TTACTCCCCCTGTAAAGAAATATAAGAGCATTTAGATCACTAAAG--------------T
BF483101At02P003D03D09R1_078.ab1      TTACTCCCTCTGTAAAG-AATATAAGAGTNGTTAGATCACTAAAGAATGTAAGCTACTTT
                                                                                                  

BF483101As01P003D03D09R1_062.ab1      ------------------------------------------------------------
BF483101Tu01P003D03D09R1_058.ab1      AGTGATCTAAACACTCTTAC----------------------------------------
BF483101At02P003D03D09R1_078.ab1      AGTGATCTAAAAACTCTTATATTTCTTTACAGAGGGAGTTCCTTTTAGCGCACTGATGGT
                                                                                                  

BF483101As01P003D03D09R1_062.ab1      --
BF483101Tu01P003D03D09R1_058.ab1      --
BF483101At02P003D03D09R1_078.ab1      TG