MUSCLE (3.6) multiple sequence alignment


BG313152Tu01P003E05E111F1_09.ab1      -----------------TTCCATTTTTT-TGTTCTGA--------------ACATGGTAA
BG313152Ln04P003E05E111F1_10.ab1      -----------------TTCCATTTTTT-TGTTCTGA--------------ACATGGTAA
BG313152Ln03P003E05E111F1_09.ab1      ------------------TCCATTTTTTATGTTCTGAACATTGGTGATTGGACATGGTAA
BG313152Ln02P003E05E111F1_10.ab1      ------------------TCCATTTTTTATGTTCTGAACATTGGTGATTGGACATGGTAA
BG313152Ln08P003E05E111F1_10.ab1      ---GTGTATGTAGATACTTCCATTTTTTATGTTCTGAACATTGGTGATTGGACATGGTAA
BG313152Ln01P003E05E111F1_09.ab1      ------------------TCCATTTTTTATGTTCTGAACATTGGTGATTGGACATGGTAA
BG313152Ln05P003E05E111F1_09.ab1      TGTCAGTGTATGTAATCTTCCATTTTTTATGTTCTGAACATTGGTGATTGGACATGGTAA
BG313152Ln06P003E05E111F1_10.ab1      -----GTGTATGTAATCTTCCATTTTTT-TGTTCTGA--------------ACATGGTAA
BG313152Ln07P003E05E111F1_09.ab1      -----GTGTATGTAATCTTCCATTTTTT-TGTTCTGA--------------ACATGGTAA
                                                        ********** ********              *********

BG313152Tu01P003E05E111F1_09.ab1      TATGCCTTATTAATCCTATGTTCTACTTCCCTTTCATTCCTGTCCTGACTGAACTTTTCT
BG313152Ln04P003E05E111F1_10.ab1      TATGCCTTATTAATCCTATGTTCTACTTCCCTTTCATTCCTGTCCTGACTGAACTTTTCT
BG313152Ln03P003E05E111F1_09.ab1      TATGCCTTATTAATCCTATGTTCTACTTCCCTTCCATTCCTGTCCTGACTGAACTTTTCT
BG313152Ln02P003E05E111F1_10.ab1      TATGCCTTATTAATCCTATGTTCTACTTCCCTTCCATTCCTGTCCTGACTGAACTTTTCT
BG313152Ln08P003E05E111F1_10.ab1      TATGCCTTATTAATCCTATGTTCTACTTCCCTTCCATTCCTGTCCTGACTGAACTTTTCT
BG313152Ln01P003E05E111F1_09.ab1      TATGCCTTATTAATCCTATGTTCTACTTCCCTTCCATTCCTGTCCTGACTGAACTTTTCT
BG313152Ln05P003E05E111F1_09.ab1      TATGCCTTATTAATCCTATGTTCTACTTCCCTTCCATTCCTGTCCTGACTGAACTTTTCT
BG313152Ln06P003E05E111F1_10.ab1      TATGCCTTATTAATCCTATGTTCTACTTCCCTTTCATTCCTGTCCTGACTGAACTTTTCT
BG313152Ln07P003E05E111F1_09.ab1      TATGCCTTATTAATCCTATGTTCTACTTCCCTTTCATTCCTGTCCTGACTGAACTTTTCT
                                      ********************************* **************************

BG313152Tu01P003E05E111F1_09.ab1      TTTACCCTTATGCGTCCCTTAAATCTGCTGAAGAAAGAGGAATATGGTATGCGTTCTATC
BG313152Ln04P003E05E111F1_10.ab1      TTTACCCTTATGCGTCCCTTAAATCTGCTGAAGAAAGAGGAATATGGTATGCGTTCTATC
BG313152Ln03P003E05E111F1_09.ab1      TTTCCCCTTATGCGTCCCTTAAATCTGCTGAAGAAAGAGGAATATGGTATGCGTTCTATC
BG313152Ln02P003E05E111F1_10.ab1      TTTCCCCTTATGCGTCCCTTAAATCTGCTGAAGAAAGAGGAATATGGTATGCGTTCTATC
BG313152Ln08P003E05E111F1_10.ab1      TTTCCCCTTATGCGTCCCTTAAATCTGCTGAAGAAAGAGGAATATGGTATGCGTTCTATC
BG313152Ln01P003E05E111F1_09.ab1      TTTCCCCTTATGCGTCCCTTAAATCTGCTGAAGAAAGAGGAATATGGTATGCGTTCTATC
BG313152Ln05P003E05E111F1_09.ab1      TTTCCCCTTATGCGTCCCTTAAATCTGCTGAAGAAAGAGGAATATGGTATGCGTTCTATC
BG313152Ln06P003E05E111F1_10.ab1      TTTCCCCTTATGCGTCCCTTAAATCTGCTGAAGAAAGAGGAATATGGTATGCGTTCTATC
BG313152Ln07P003E05E111F1_09.ab1      TTTACCCTTATGCGTCCCTTAAATCTGCTGAAGAAAGAGGAATATGGTATGCGTTCTATC
                                      *** ********************************************************

BG313152Tu01P003E05E111F1_09.ab1      TTAGCTTCTTGTCCAGTGAGAGGAAATTATAAATACTGTTCGTTGTCGTCTTAGCATCTC
BG313152Ln04P003E05E111F1_10.ab1      TTAGCTTCTTGTCCAGTGAGAGGAAATTATAAATACTGTTCGTTGTTGTCTTAGCATCTC
BG313152Ln03P003E05E111F1_09.ab1      TTAGCTTCTTGTCCAGCGAGAGGAAATTATAAATACTGTTCGTTGTTGTCTTAGCATCTC
BG313152Ln02P003E05E111F1_10.ab1      TTAGCTTCTTGTCCAGTGAGAGGAAATTATAAATACTGTTCGTTGTTGTCTTAGCATCTC
BG313152Ln08P003E05E111F1_10.ab1      TTAGCTTCTTGTCCAGTGAGAGGAAATTATAAATACTGTTCGTTGTTGTCTTAGCATCTC
BG313152Ln01P003E05E111F1_09.ab1      TTAGCTTCTTGTCCAGTGAGAGGAAATTATAAATACTGTTCGTTGTTGTCTTAGCATCTC
BG313152Ln05P003E05E111F1_09.ab1      TTAGCTTCTTGTCCAGTGAGAGGAAATTATAAATACTGTTCGTTGTCGTCTTAGCATCTC
BG313152Ln06P003E05E111F1_10.ab1      TTAGCTTCTTGTCCAGTGAGAGGAAATTATAAATACTGTTCGTTGTTGTCTTAGCATCTC
BG313152Ln07P003E05E111F1_09.ab1      TTAGCTTCTTGTCCAGTGAGAGGAAATTATAAATACTGTTCGTTGTTGTCTTAGCATCTC
                                      **************** ***************************** *************

BG313152Tu01P003E05E111F1_09.ab1      ATTCTTGAAAACTGAAAAGCAGCGAGATTAGCTTTATTAATTTCAGGCACATGTATGACT
BG313152Ln04P003E05E111F1_10.ab1      ATTCTTGAAAACTGAAAAGCAGCGAGATTAGCTTTATTAATTTCAGGCACATGTATGACT
BG313152Ln03P003E05E111F1_09.ab1      ATTCTTGAAAACTGAAAAGCAGCGAG---AGCTTTATTAATTTCAGGCACATGTATGACT
BG313152Ln02P003E05E111F1_10.ab1      ATTCTTGAAAACTGAAAAGCAGCGAG---AGCTTTATTAATTTCAGGCACATGTATGACT
BG313152Ln08P003E05E111F1_10.ab1      ATTCTTGAAAACTGAAAAGCAGCGAG---AGCTTTATTAATTTCAGGCACATGTATGACT
BG313152Ln01P003E05E111F1_09.ab1      ATTCTTGAAAACTGAAAAGCAGCGAG---AGCTTTATTAATTTCAGGCACATGTATGACT
BG313152Ln05P003E05E111F1_09.ab1      ATTCTTGAAAACTGAAAAGCAGCGAG---AGCTTTATTAATTTCAGGCACATGTATGACT
BG313152Ln06P003E05E111F1_10.ab1      ATTCTTGAAAACTGAAAAGCAGCGAG---AGCTTTATTAATTTCAGGCACATGTATGACT
BG313152Ln07P003E05E111F1_09.ab1      ATTCTTGAAAACTGAAAAGCAGCGAG---AGCTTTATTAATTTCAGGCACATGTATGACT
                                      **************************   *******************************

BG313152Tu01P003E05E111F1_09.ab1      TATGTATTTTCAATGGACACCTGTTTTTGTTTAAATCTGAGTTAGTGCATCAGTATGAGC
BG313152Ln04P003E05E111F1_10.ab1      CATGTATTTTCAATGGACACCTGTTTTTGTTTAAATCTGAGTTAGTGCATCAGTATGAGC
BG313152Ln03P003E05E111F1_09.ab1      TATATATTTCCAATGGACACCTGTTTTTGTTTAAATCTGAGTTAGTGCATCAGTATGAGC
BG313152Ln02P003E05E111F1_10.ab1      TATATATTTCCAATGGACACCTGTTTTTGTTTAAATCTGAGTTAGTGCATCAGTATGAGC
BG313152Ln08P003E05E111F1_10.ab1      TATATATTTCCAATGGACACCTGTTTTTGTTTAAATCTGAGTTAGTGCATCAGTATGAGC
BG313152Ln01P003E05E111F1_09.ab1      TATATATTTCCAATGGACACCTGTTTTTGTTTAAATCTGAGTTAGTGCATCAGTATGAGC
BG313152Ln05P003E05E111F1_09.ab1      TATATATTTCCAATGGACACCTGTTTTTGTTTAAATCTGAGTTAGTGCATCAGTATGAGC
BG313152Ln06P003E05E111F1_10.ab1      TATATATTTCCAATGGACACCTGTTTTTGTTTAAATCTGAGTTAGTGCATCAGTATGAGC
BG313152Ln07P003E05E111F1_09.ab1      TATATATTTCCAATGGACACCTGTTTTTGTTTAAATCTGAGTTAGTGCATCAGTATGAGC
                                       ** ***** **************************************************

BG313152Tu01P003E05E111F1_09.ab1      TGTAGCGGCTATGTGCATTGTCTTCTCTTAAAAAATATCAAAATGATAATATCGAACGTG
BG313152Ln04P003E05E111F1_10.ab1      TGTAGCTGTTATGTGCATTGTTTTCTCTT--AAAATATGAAAATGATAATATCGAACGTG
BG313152Ln03P003E05E111F1_09.ab1      TGTAGCTGTTATGTGCATTGTTTTCTCTT--AAAATATGAAAATGATAATATCGAACGTG
BG313152Ln02P003E05E111F1_10.ab1      TGTAGCTGTTATGTGCATTGTTTTCTCTT--AAAATATGAAAATGATAATATCGAACGTG
BG313152Ln08P003E05E111F1_10.ab1      TGTAGCTGTTATGTGCATTGTTTTCTCTT--AAAATATGAAAATGATAATATCGAACGTG
BG313152Ln01P003E05E111F1_09.ab1      TGTAGCTGTTATGTGCATTGTTTTCTCTT--AAAATATGAAAATGATAATATCGAACGTG
BG313152Ln05P003E05E111F1_09.ab1      TGTAGCTGTTATGTGCATTGTTTTCTCTT--AAAATATGAAAATGATAATATCGAACGTG
BG313152Ln06P003E05E111F1_10.ab1      TGTAGCTGTTATGTGCATTGTTTTCTCTT--AAAATATGAAAATGATAATATCGAACGTG
BG313152Ln07P003E05E111F1_09.ab1      TGTAGCTGTTATGTGCATTGTTTTCTCTTAAAAAATATCAAAATGATAATATCGAACGTG
                                      ****** * ************ *******  ******* *********************

BG313152Tu01P003E05E111F1_09.ab1      ATTTGTTCAATAAATATGTAATGCAGCATCCTTTACAGCATCATTTTTATTGTGTTATGC
BG313152Ln04P003E05E111F1_10.ab1      ATTTGTTCAATAAATATGTAATGTAGCATCCTTTACAGCATCATTTTTATTGTGTTATGC
BG313152Ln03P003E05E111F1_09.ab1      ATTTGTTCAATAAATATGTAATGTAGCATCCTTTACAGCATCATTTTTATTGTGTTATGC
BG313152Ln02P003E05E111F1_10.ab1      ATTTGTTCAATAAATATGTAATGTAGCATCCTTTACAGCATCATTTTTATTGCGTTATGC
BG313152Ln08P003E05E111F1_10.ab1      ATTTGTTCAATAAATATGTAATGTAGCATCCTTTACAGCATCATTTTTATTGTGTTATGC
BG313152Ln01P003E05E111F1_09.ab1      ATTTGTTCAATAAATATGTAATGTAGCATCCTTTACAGCATCATTTTTATTGTGTTATGC
BG313152Ln05P003E05E111F1_09.ab1      ATTTGTTCAATAAATATGTAATGTAGCATCCTTTACAGCATCATTTTTATTGTGTTATGC
BG313152Ln06P003E05E111F1_10.ab1      ATTTGTTCAATAAATATGTAATGTAGCATCCTTTACAGCATCATTTTTATTGTGTTATGC
BG313152Ln07P003E05E111F1_09.ab1      ATTTGTTCAATAAATATGTAATGTAGCATCCTTTACAGCATCATTTTTATTGTGTTATGC
                                      *********************** **************************** *******

BG313152Tu01P003E05E111F1_09.ab1      AGGATTAAAGAACCCCTTCACCTTAATGAGTTATGTTACCCCGGTGATGGCAATAACAAC
BG313152Ln04P003E05E111F1_10.ab1      AGGATTAAAGAACCCCTTCACCTTAATGAGTTATGTTACCCCGGTGATGGCAATAACAAC
BG313152Ln03P003E05E111F1_09.ab1      AGGATTAAAGAACCCCTTCACCTTAATGAGTTATGTTACCCCGGTGATGGCAATAACAAC
BG313152Ln02P003E05E111F1_10.ab1      AGGATTAAAGAACCCCTTCACCTTAATGAGTTATGTTACCCCGGTGATGGCAATAACAAC
BG313152Ln08P003E05E111F1_10.ab1      AGGATTAAAGAACCCCTTCACCTTAATGAGTTATGTTACCCCGGTGATGGCAATAACAAC
BG313152Ln01P003E05E111F1_09.ab1      AGGATTAAAGAACCCCTTCACCTTAATGAGTTATGTTACCCCGGTGATGGCAATAACAAC
BG313152Ln05P003E05E111F1_09.ab1      AGGATTAAAGAACCCCTTCACCTTAATGAGTTATGTTACCCCGGTGATGGCAATAACAAC
BG313152Ln06P003E05E111F1_10.ab1      AGGATTAAAGAACCCCTTCACCTTAATGAGTTATGTTACCCCGGTGATGGCAATAACAAC
BG313152Ln07P003E05E111F1_09.ab1      AGGATTAAAGAACCCCTTCACCTTAATGAGTTATGTTACCCCGGTGATGGCAATAACAAC
                                      ************************************************************

BG313152Tu01P003E05E111F1_09.ab1      TGCAATTATTTCCATTGCCATGGATCCATGGCATGAAGTCAGAGCAAGTCACTTCTTTGA
BG313152Ln04P003E05E111F1_10.ab1      TGCAATTATTTCCATTGCCATGGATCCATGGCATGAAGTCAGAGCAAGTCACTTCTTTGA
BG313152Ln03P003E05E111F1_09.ab1      TGCAATTATTTCCATTGCCATGGATCCATGGCATGAAGTCAGAGCAAGTCACTTCTTTGA
BG313152Ln02P003E05E111F1_10.ab1      TGCAATTATTTCCATTGCCATGGATCCATGGCATGAAGTCAGAGCAAGTCACTTCTTTGA
BG313152Ln08P003E05E111F1_10.ab1      TGCAATTATTTCCATTGCCATGGATCCATGGCATGAAGTCAGAGCAAGTCACTTCTTTGA
BG313152Ln01P003E05E111F1_09.ab1      TGCAATTATTTCCATTGCCATGGATCCATGGCATGAAGTCAGAGCAAGTCACTTCTTTGA
BG313152Ln05P003E05E111F1_09.ab1      TGCAATTATTTCCATTGCCATGGATCCATGGCATGAAGTCAGAGCAAGTCACTTCTTTGA
BG313152Ln06P003E05E111F1_10.ab1      TGCAATTATTTCCATTGCCATGGATCCATGGCATGAAGTCAGAGCAAGTCACTTCTTTGA
BG313152Ln07P003E05E111F1_09.ab1      TGCAATTATTTCCATTGCCATGGATCCATGGCATGAAGTCAGAGCAAGTCACTTCTTTGA
                                      ************************************************************

BG313152Tu01P003E05E111F1_09.ab1      TAGTCCAGATCACATATTAAGAAGCATCTTATTGATGCTTCTAG----------------
BG313152Ln04P003E05E111F1_10.ab1      TAGTCCAGATCACATATTAAGAAGCATCTTATTGATGCTTCTAGGTGGTGCTTTGGCATT
BG313152Ln03P003E05E111F1_09.ab1      TAGTCCAGCTCACATATTAAGAAGCATCTTATTGATGCTTCTAGGTGGTGCTTTGGCATT
BG313152Ln02P003E05E111F1_10.ab1      TAGTCCAGCTCACATATTAAGAAGCATCTTATTGATGCTTCTAGGTGGTGCTTTGGCATT
BG313152Ln08P003E05E111F1_10.ab1      TAGTCCAGCTCACATATTAAGAAGCATCTTATTGATGCTTCTAGGTGGTGCTTTGGCATT
BG313152Ln01P003E05E111F1_09.ab1      TAGTCCAGATCACATATTAAGAAGCATCTTATTGATGCTTCTAGGTGGTGCTTTGGCATT
BG313152Ln05P003E05E111F1_09.ab1      TAGTCCAGATCACATATTAAGAAGCATCTTATTGATGCTTCTAGGTGGTGCTTTGGCATT
BG313152Ln06P003E05E111F1_10.ab1      TAGTCCAGCTCACATATTAAGAAGCATCTTATTGATGCTTCTAGGTGGTGCTTTGGCATT
BG313152Ln07P003E05E111F1_09.ab1      TAGTCCAGCTCACATATTAAGAAGCATCTTATTGATGCTTCTAGGTGGTGCTTTGGCATT
                                      ******** ***********************************                

BG313152Tu01P003E05E111F1_09.ab1      ------------------------------------------------------------
BG313152Ln04P003E05E111F1_10.ab1      CTTCATAATCGAATTCCCGCGGCCGCCATGGCGGCCGGGAGCATGCGACGT---------
BG313152Ln03P003E05E111F1_09.ab1      CTTCATAATCGAATTCCCGCGGCCGCCATGGCGGCCGGGAGCATGCGACGT---------
BG313152Ln02P003E05E111F1_10.ab1      CTTCATAATCGAATTCCCGCGGCCGCCATGGCGGCCGGGAGCATGCGACGTCGGGCCCAT
BG313152Ln08P003E05E111F1_10.ab1      CTTCATAATCGAATTCCCGCGGCCGCCATGGCGGCCGGGAGCATGCGACGT---------
BG313152Ln01P003E05E111F1_09.ab1      CTTCATAATCGAATTCCCGCGGCCGCCATGGCGGCCGG----------------------
BG313152Ln05P003E05E111F1_09.ab1      CTTCATAATCGAATTCCCGCGGCCGCCATGGCGGCCGGGAGCATGCGACGT---------
BG313152Ln06P003E05E111F1_10.ab1      CTTCATAATCGAATTCCCGCGGCCGCCATGGCGGCCGGGAGCATGCGACGTCGGGCCCAT
BG313152Ln07P003E05E111F1_09.ab1      CTTCATAATCGAATTCCCGCGGCCGCCATGGCGGCCGGGAGCATGCGACGTCGGGCCCAT
                                                                                                  

BG313152Tu01P003E05E111F1_09.ab1      ----------
BG313152Ln04P003E05E111F1_10.ab1      ----------
BG313152Ln03P003E05E111F1_09.ab1      ----------
BG313152Ln02P003E05E111F1_10.ab1      TCGCCCTA--
BG313152Ln08P003E05E111F1_10.ab1      ----------
BG313152Ln01P003E05E111F1_09.ab1      ----------
BG313152Ln05P003E05E111F1_09.ab1      ----------
BG313152Ln06P003E05E111F1_10.ab1      TCGCCCTATA
BG313152Ln07P003E05E111F1_09.ab1      T---------