MUSCLE (3.6) multiple sequence alignment BG313208Tu01P027F04P027F101C1 ------------------------------------------------------------ BG313208Tu02P027F04P027F101C1 ------------------------------------------------------------ BG313208Ld01P027F04P027F101C1 ---------TATGACCATGATTACGCCAAGCTATT-----TAGGTGACACTATAGAATAC BG313208Ld02P027F04P027F101C1 ------------GACCATGATTACGCCAAGCTATT-----TAGGTGACACTATAGAATAC BG313208Ld10P027F04P027F101C1 ---------TATGACCATGATTACGCCAAGCTATT-----TAGGTGACACTATAGAATAC BG313208Ld03P027F04P027F101C1 ------------GACCATGATTACGCCAAGCTATT-----TAGGTGACACTATAGAATAC BG313208At02P027F04P027F101C1 ------------------------------------------------------------ BG313208Ld04P027F04P027F101C1 ---------------TAAAACGACGGCCAGTGAATTGTAATACGACTCACTATAGGGC-- BG313208Ld06P027F04P027F101C1 ---------------TAAAACGACGGCCAGTGAATTGTAATACGACTCACTATAGGGC-- BG313208Ld05P027F04P027F101C1 -------------ACCATGATTACGCCAAGCTATT-----TAGGTGACACTATAGAATAC BG313208Ld07P027F04P027F101C1 -----------TGACCATGATTACGCCAAGCTATT-----TAGGTGACACTATAGAATAC BG313208Ld08P027F04P027F101C1 GAAACAGGCTATGACCATGATTACGCCAAGCTATT-----TAGGTGACACTATAGAATAC BG313208Ld09P027F04P027F101C1 GAAACAGGCTATGACCATGATTACGCCAAGCTATT-----TAGGTGACACTATAGAATAC BG313208As01P027F04P027F101C1 ------------------------------------------------------------ BG313208As02P027F04P027F101C1 ------------------------------------------------------------ BG313208Tu01P027F04P027F101C1 ------------------------------------------------------------ BG313208Tu02P027F04P027F101C1 ------------------------------------------------------------ BG313208Ld01P027F04P027F101C1 TCAAGCTATGCATCCAACGCGTTGGGAGCTCTCCCATATGGTCGACCTGCA-GGCGGCCG BG313208Ld02P027F04P027F101C1 TCAAGCTATGCATCCAACGCGTTGGGAGCTCTCCCATATGGTCGACCTGCA-GGCGGCCG BG313208Ld10P027F04P027F101C1 TCAAGCTATGCATCCAACGCGTTGGGAGCTCTCCCATATGGTCGACCTGCA-GGCGGCCG BG313208Ld03P027F04P027F101C1 TCAAGCTATGCATCCAACGCGTTGGGAGCTCTCCCATATGGTCGACCTGCA-GGCGGCCG BG313208At02P027F04P027F101C1 ------------------------------------------------------------ BG313208Ld04P027F04P027F101C1 ----GAATTGGGCCCGACG------------TCGCATGCTCCCGGCCGCCATGGCGGCCG BG313208Ld06P027F04P027F101C1 ----GAATTGGGCCCGACG------------TCGCATGCTCCCGGCCGCCATGGCGGCCG BG313208Ld05P027F04P027F101C1 TCAAGCTATGCATCCAACGCGTTGGGAGCTCTCCCATATGGTCGACCTGCA-GGCGGCCG BG313208Ld07P027F04P027F101C1 TCAAGCTATGCATCCAACGCGTTGGGAGCTCTCCCATATGGTCGACCTGCA-GGCGGCCG BG313208Ld08P027F04P027F101C1 TCAAGCTATGCATCCAACGCGTTGGGAGCTCTCCCATATGGTCGACCTGCA-GGCGGCCG BG313208Ld09P027F04P027F101C1 TCAAGCTATGCATCCAACGCGTTGGGAGCTCTCCCATATGGTCGACCTGCA-GGCGGCCG BG313208As01P027F04P027F101C1 ------------------------------------------------------------ BG313208As02P027F04P027F101C1 ------------------------------------------------------------ BG313208Tu01P027F04P027F101C1 --------------------CTTGGTTACTGCATGGGTTCGCCGAGGCCGATGGTTTGAT BG313208Tu02P027F04P027F101C1 --------------------CTTGGTTACTGCATGGGTTCGCCGAGGCCGATGGTTTGAT BG313208Ld01P027F04P027F101C1 C--GAATTCACTAGTGATTCCTTGGTTACTGCATGGGTTCGCCGAGGCCGATGGTTTGAT BG313208Ld02P027F04P027F101C1 C--GAATTCACTAGTGATTCCTTGGTTACTGCATGGGTTCGCCGAGGCCGATGGTTTGAT BG313208Ld10P027F04P027F101C1 C--GAATTCACTAGTGATTCCTTGGTTACTGCATGGGTTCGCCGAGGCCGATGGTTTGAT BG313208Ld03P027F04P027F101C1 C--GAATTCACTAGTGATTCCTTGGTTACTGCATGGGTTCGCCGAGGCCGATGGTTTGAT BG313208At02P027F04P027F101C1 -----------------------------TGCATGGGTTCGCCGAGGCCGATGGTTTGAC BG313208Ld04P027F04P027F101C1 CGGGAATTC------GATTCCTTGGTTACTGCATGGGTTCGCCGAGGCCGATGGTTTGAC BG313208Ld06P027F04P027F101C1 CGGGAATTC------GATTCCTTGGTTACTGCATGGGTTCGCCGAGGCCGATGGTTTGAC BG313208Ld05P027F04P027F101C1 C--GAATTCACTAGTGATTCCTTGGTTACTGCATGGGTTCGCCGAGGCCGATGGTTTGAC BG313208Ld07P027F04P027F101C1 C--GAATTCACTAGTGATTCCTTGGTTACTGCATGGGTTCGCCGAGGCCGATGGTTTGAC BG313208Ld08P027F04P027F101C1 C--GAATTCACTAGTGATTCCTTGGTTACTGCATGGGTTCGCCGAGGCCGATGGTTTGAC BG313208Ld09P027F04P027F101C1 C--GAATTCACTAGTGATTCCTTGGTTACTGCATGGGTTCGCCGAGGCCGATGGTTTGAC BG313208As01P027F04P027F101C1 -------------------------TTACTGCATGGGTTCGCCGAGGCCGATGGTTTGAC BG313208As02P027F04P027F101C1 ---------------------TTGGTTACTGCATGGGTTCGCCGAGGCCGATGGTTTGAC ****************************** BG313208Tu01P027F04P027F101C1 GAAGAGGTAGCCTGCTTCTTTC-------------------------------------- BG313208Tu02P027F04P027F101C1 GAAGAGGTAGCCTGCTTCTTTC-------------------------------------- BG313208Ld01P027F04P027F101C1 GAAGAGGTAGCCTGCTTCTTTC-------------------------------------- BG313208Ld02P027F04P027F101C1 GAAGAGGTAGCCTGCTTCTTTC-------------------------------------- BG313208Ld10P027F04P027F101C1 GAAGAGGTAGCCTGCTTCTTTC-------------------------------------- BG313208Ld03P027F04P027F101C1 GAAGAGGTAGCCTGCTTCTTTC-------------------------------------- BG313208At02P027F04P027F101C1 GAAGAGGTAGCCTGCTTCTTTCTAC----------------------------------- BG313208Ld04P027F04P027F101C1 GAAGAGGTAGCCTGCTTCTTTCTACTCCCTCCGTTCCTAAATACTTGTCTTTCTAGAGAT BG313208Ld06P027F04P027F101C1 GAAGAGGTAGCCTGCTTCTTTCTACTCCCTCCGTTCCTAAATACTTGTCTTTCTAGAGAT BG313208Ld05P027F04P027F101C1 GAAGAGGTAGCCTGCTTCTTTCTACTCCCTCCGTTCCTAAATACTTGTCTTTCTAGAGAT BG313208Ld07P027F04P027F101C1 GAAGAGGTAGCCTGCTTCTTTCTACTCCCTCCGTTCCTAAATACTTGTCTTTCTAGAGAT BG313208Ld08P027F04P027F101C1 GAAGAGGTAGCCTGCTTCTTTCTACTCCCTCCGTTCCTAAATACTTGTCTTTCTAGAGAT BG313208Ld09P027F04P027F101C1 GAAGAGGTAGCCTGCTTCTTTCTACTCCCTCCGTTCCTAAATACTTGTCTTTCTAGAGAT BG313208As01P027F04P027F101C1 GAAGAGGTAGCCTGCTTCTTTC-------------------------------------- BG313208As02P027F04P027F101C1 GAAGAGGTAGCCTGCTTCTTTC-------------------------------------- ********************** BG313208Tu01P027F04P027F101C1 ------------------------------------------------------------ BG313208Tu02P027F04P027F101C1 ------------------------------------------------------------ BG313208Ld01P027F04P027F101C1 ------------------------------------------------------------ BG313208Ld02P027F04P027F101C1 ------------------------------------------------------------ BG313208Ld10P027F04P027F101C1 ------------------------------------------------------------ BG313208Ld03P027F04P027F101C1 ------------------------------------------------------------ BG313208At02P027F04P027F101C1 ------------------------------------------------------------ BG313208Ld04P027F04P027F101C1 TTCAACAAGTGACTACATTCGGCGCAAAATGAGTGAATCTACACTTTTAAAATATGTCTA BG313208Ld06P027F04P027F101C1 TTCAACAAGTGACTACATTCGGCGCAAAATGAGTGAATCTACACTTTTAAAATATGTCTA BG313208Ld05P027F04P027F101C1 TTCAACAAGTGACTACATTCGGCGCAAAATGAGTGAATCTACACTTTTAAAATATGTCTA BG313208Ld07P027F04P027F101C1 TTCAACAAGTGACTACATTCGGCGCAAAATGAGTGAATCTACACTTTTAAAATATGTCTA BG313208Ld08P027F04P027F101C1 TTCAACAAGTGACTACATTCGGCGCAAAATGAGTGAATCTACACTTTTAAAATATGTCTA BG313208Ld09P027F04P027F101C1 TTCAACAAGTGACTACATTCGGCGCAAAATGAGTGAATCTACACTTTTAAAATATGTCTA BG313208As01P027F04P027F101C1 ------------------------------------------------------------ BG313208As02P027F04P027F101C1 ------------------------------------------------------------ BG313208Tu01P027F04P027F101C1 ------------------------------------------------------------ BG313208Tu02P027F04P027F101C1 ------------------------------------------------------------ BG313208Ld01P027F04P027F101C1 ------------------------------------------------------------ BG313208Ld02P027F04P027F101C1 ------------------------------------------------------------ BG313208Ld10P027F04P027F101C1 ------------------------------------------------------------ BG313208Ld03P027F04P027F101C1 ------------------------------------------------------------ BG313208At02P027F04P027F101C1 ------------------------------------------------------------ BG313208Ld04P027F04P027F101C1 CATACATCTGTATGTTGAGTCCATTTGAAATGCCTAGAAAGACAAGTATTTGGGAACGGA BG313208Ld06P027F04P027F101C1 CATACATCTGTATGTTGAGTCCATTTGAAATGCCTAGAAAGACAAGTATTTGGGAACGGA BG313208Ld05P027F04P027F101C1 CATACATCTGTATGTTGAGTCCATTTGAAATGCCTAGAAAGACAAGTATTTGGGAACGGA BG313208Ld07P027F04P027F101C1 CATACATCTGTATGTTGAGTCCATTTGAAATGCCTAGAAAGACAAGTATTTGGGAACGGA BG313208Ld08P027F04P027F101C1 CATACATCTGTATGTTGAGTCCATTTGAAATGCCTAGAAAGACAAGTATTTGGGAACGGA BG313208Ld09P027F04P027F101C1 CATACATCTGTATGTTGAGTCCATTTGAAATGCCTAGAAAGACAAGTATTTGGGAACGGA BG313208As01P027F04P027F101C1 ------------------------------------------------------------ BG313208As02P027F04P027F101C1 ------------------------------------------------------------ BG313208Tu01P027F04P027F101C1 -----TATAATATAACACCCCTCCATTCTGTCGATGTATCTCTTGCAAATTCTGACCGGT BG313208Tu02P027F04P027F101C1 -----TATAATATAACACCCCTCCATTCTGTCGATGTATCTCTTGCAAATTCTGACCGGT BG313208Ld01P027F04P027F101C1 -----TATAATATAACACCCCTCCATTCTGTCGATTTATCTCTTGCAAATTCTGACCGGT BG313208Ld02P027F04P027F101C1 -----TATAATATAACACCCCTCCATTCTGTCGATTTATCTCTTGCAAATTCTGACCGGT BG313208Ld10P027F04P027F101C1 -----TATAATATAACACCCCTCCATTCTGTCGATTTATCTCTTGCAAATTCTGACCGGT BG313208Ld03P027F04P027F101C1 -----TATAATATAACACCCCTCCATTCTGTCGATTTATCTCTTGCAAATTCTGACCGGT BG313208At02P027F04P027F101C1 -----TATAATATAACACCCCTCCATTCTGTTGATGTATCTCTTGCAGATTCTGACTGGT BG313208Ld04P027F04P027F101C1 GGGAGTATAATATAACA-CCCTCCATTCTGTTGATGTATCTGTTGCAGATTCTGACCGGT BG313208Ld06P027F04P027F101C1 GGGAGTATAATATAACA-CCCTCCATTCTGTTGATGTATCTGTTGCAGATTCTGACCGGT BG313208Ld05P027F04P027F101C1 GGGAGTATAATATAACA-CCCTCCATTCTGTTGATGTATCTGTTGCAGATTCTGACCGGT BG313208Ld07P027F04P027F101C1 GGGAGTATAATATAACA-CCCTCCATTCTGTTGATGTATCTGTTGCAGATTCTGACCGGT BG313208Ld08P027F04P027F101C1 GGGAGTATAATATAACA-CCCTCCATTCTGTTGATGTATCTGTTGCAGATTCTGACCGGT BG313208Ld09P027F04P027F101C1 GGGAGTATAATATAACA-CCCTCCATTCTGTTGATGTATCTGTTGCAGATTCTGACCGGT BG313208As01P027F04P027F101C1 -----TATAATATAACACCCCTCCATTCTGTTGATGTATCTGTTGCAGATTCTGACCGGT BG313208As02P027F04P027F101C1 -----TATAATATAACACCCCTCCATTCTGTTGATGTATCTGTTGCAGATTCTGACCGGT ************ ************* *** ***** ***** ******** *** BG313208Tu01P027F04P027F101C1 TGTTTACTGATTGCAGGGGAGAGCAGTATATGCAGCCGAGGCTGATAGAATTCGCAATTG BG313208Tu02P027F04P027F101C1 TGTTTACTGATTGCAGGGGAGAGCAGTATATGCAGCCGAGGCTGATAGAATTCGCAATTG BG313208Ld01P027F04P027F101C1 TGTTTACTGATTGCAGGGGAGAGCAGTATATGCAGCCGAGGCTGATAGAATTCGCAATTG BG313208Ld02P027F04P027F101C1 TGTTTACTGATTGCAGGGGAGAGCAGTATATGCAGCCGAGGCTGATAGAATTCGCAATTG BG313208Ld10P027F04P027F101C1 TGTTTACTGATTGCAGGGGAGAGCAGTATATGCAGCCGAGGCTGATAGAATTCGCAATTG BG313208Ld03P027F04P027F101C1 TGTTTACTGATTGCAGGGGAGAGCAGTATATGCAGCCGAGGCTGATAGAATTCGCAATTG BG313208At02P027F04P027F101C1 TGTTTACCGATTGCAGGGGAGAGCAGTATATGCAGCCGAGGCTGATAGAATTCGCAATTG BG313208Ld04P027F04P027F101C1 AGTTTACCGATTGCAGGGGAGAGCAGTATATGCAGCCGAGGCTGATAGAATTCGCAATTG BG313208Ld06P027F04P027F101C1 AGTTTACCGATTGCAGGGGAGAGCAGTATATGCAGCCGAGGCTGATAGAATTCGCAATTG BG313208Ld05P027F04P027F101C1 AGTTTACCGATTGCAGGGGAGAGCAGTATATGCAGCCGAGGCTGATAGAATTCGCAATTG BG313208Ld07P027F04P027F101C1 AGTTTACCGATTGCAGGGGAGAGCAGTATATGCAGCCGAGGCTGATAGAATTCGCAATTG BG313208Ld08P027F04P027F101C1 AGTTTACCGATTGCAGGGGAGAGCAGTATATGCAGCCGAGGCTGATAGAATTCGCAATTG BG313208Ld09P027F04P027F101C1 AGTTTACCGATTGCAGGGGAGAGCAGTATATGCAGCCGAGGCTGATAGAATTCGCAATTG BG313208As01P027F04P027F101C1 TGTTTACCGATTGCAGGGGAGAGCAGTATATGCAGCCGAGGCTGATAGAATTCGCAATTG BG313208As02P027F04P027F101C1 TGTTTACCGATTGCAGGGGAGAGCAGTATATGCAGCCGAGGCTGATAGAATTCGCAATTG ****** **************************************************** BG313208Tu01P027F04P027F101C1 GGCTGAAAGTCGAACACGCAT--------------------------------------- BG313208Tu02P027F04P027F101C1 GGCTGAAAGTCGAACACGCAT--------------------------------------- BG313208Ld01P027F04P027F101C1 GGCTGAAAGTCGAACACGCATCTCCTAATC------GAATTCCCGCGGCCGCCATGGCGG BG313208Ld02P027F04P027F101C1 GGCTGAAAGTCGAACACGCATCTCCTAATC------GAATTCCCGCGGCCGCCATGGCGG BG313208Ld10P027F04P027F101C1 GGCTGAAAGTCGAACACGCATCTCCTAATC------GAATTCCCGCGGCCGCCATGGCGG BG313208Ld03P027F04P027F101C1 GGCTGAAAGTCGAACACGCATCTCCTAATC------GAATTCCCGCGGCCGCCATGGCGG BG313208At02P027F04P027F101C1 GGCTGAAAGTCGAACACGCATCA------------------------------------- BG313208Ld04P027F04P027F101C1 GGCTGAAAGTCGAACACGCATCTCCTAATCACTAGTGAATT--CGCGGCCGCC-TGCAGG BG313208Ld06P027F04P027F101C1 GGCTGAAAGTCGAACACGCATCTCCTAATCACTAGTGAATT--CGCGGCCGCC-TGCAGG BG313208Ld05P027F04P027F101C1 GGCTGAAAGTCGAACACGCATCTCCTAATC------GAATTCCCGCGGCCGCCATGGCGG BG313208Ld07P027F04P027F101C1 GGCTGAAAGTCGAACACGCATCTCCTAATC------GAATTCCCGCGGCCGCCATGGCGG BG313208Ld08P027F04P027F101C1 GGCTGAAAGTCGAACACGCATCTCCTAATC------GAATTCCCGCGGCCGCCATGGCGG BG313208Ld09P027F04P027F101C1 GGCTGAAAGTCGAACACGCATCTCCTAATC------GAATTCCCGCGGCCGCCATGGCGG BG313208As01P027F04P027F101C1 GGCTGAAAGTCGAACACGCAT--------------------------------------- BG313208As02P027F04P027F101C1 GGCTGAAAGTCGAACACGCAT--------------------------------------- ********************* BG313208Tu01P027F04P027F101C1 ------------------------------------------------------------ BG313208Tu02P027F04P027F101C1 ------------------------------------------------------------ BG313208Ld01P027F04P027F101C1 CCGGGAGCATGCGA------------CGTCGGGCCCA--------------------ATT BG313208Ld02P027F04P027F101C1 CCGGGAGCATGCGA------------CGTCGGGCCCA--------------------ATT BG313208Ld10P027F04P027F101C1 CCGGGAGCATGCGA------------CGTCGGGCCCA--------------------ATT BG313208Ld03P027F04P027F101C1 CCGGGAGCATGCGA------------CGTCGGGCCCA--------------------ATT BG313208At02P027F04P027F101C1 ------------------------------------------------------------ BG313208Ld04P027F04P027F101C1 TCGACCATATGGGAGAGCTCCCAACGCGTTGGATGCATAGCTTGAGTATTCTATAGTGTC BG313208Ld06P027F04P027F101C1 TCGACCATATGGGAGAGCTCCCAACGCGTTGGATGCATAGCTTGAGTATTCTATAGTGTC BG313208Ld05P027F04P027F101C1 CCGGGAGCATGCGA------------CGTCGGGCCCA--------------------ATT BG313208Ld07P027F04P027F101C1 CCGGGAGCATGCGA------------CGTCGGGCCCA--------------------ATT BG313208Ld08P027F04P027F101C1 CCGGGAGCATGCGA------------CGTCGGGCCCA--------------------ATT BG313208Ld09P027F04P027F101C1 CCGGGAGCATGCGA------------CGTCGGGCCCA--------------------ATT BG313208As01P027F04P027F101C1 ------------------------------------------------------------ BG313208As02P027F04P027F101C1 ------------------------------------------------------------ BG313208Tu01P027F04P027F101C1 -------------------------------------------- BG313208Tu02P027F04P027F101C1 -------------------------------------------- BG313208Ld01P027F04P027F101C1 CGCCCTATAGTGAGTCGTATTACAATTCACTGGCCGTCGTTTTA BG313208Ld02P027F04P027F101C1 CGCCCTATAGTGAGTCGTATTACAATTCACTGGCCGTCGTTTTA BG313208Ld10P027F04P027F101C1 CGCCCTATAGTGAGTCGTATTACAATTCACTGGCCGTCGTTTTA BG313208Ld03P027F04P027F101C1 CGCCCTATAGTGAGTCGTATTACAATTCACTGGCCGTCGTTTTA BG313208At02P027F04P027F101C1 -------------------------------------------- BG313208Ld04P027F04P027F101C1 ACCTAAATAGCTTGGCGTAATCATGGT----------------- BG313208Ld06P027F04P027F101C1 ACCTAAATAGCTTGGCGTAATCATGGTCATAGCCTGTTTC---- BG313208Ld05P027F04P027F101C1 CGCCCTATAGTGAGTCGTATTACAATTCACTGGCC--------- BG313208Ld07P027F04P027F101C1 CGCCCTATAGTGAGTCGTATTACAATTCACTGGC---------- BG313208Ld08P027F04P027F101C1 CGCCCTATAGTGAGTCGTATTACAATTCACTGGCC--------- BG313208Ld09P027F04P027F101C1 CGCCCTATAGTGAGTCGTATTACAATTCACTGGCC--------- BG313208As01P027F04P027F101C1 -------------------------------------------- BG313208As02P027F04P027F101C1 --------------------------------------------