MUSCLE (3.6) multiple sequence alignment BG313208At02P027F04P027F101F1_06 -----TGCTTCTTTCT-------------------------------------------- BG313208Ld07P027F04P027F101F1_06 --GCCTGCTTCTTTCT-CTCCCTCCGTTCCTAAATACTTGTCTTTCTAGAGATTTCAACA BG313208Ld09P027F04P027F101F1_06 TAGCCTGCTTCTTTCT-CTCCCTCCGTTCCTAAATACTTGTCTTTCTAGAGATTTCAACA BG313208Ld08P027F04P027F101F1_06 ----CTGCTTCTTTCA-CTCCCTCCGTTCCTAAATACTTGTCTTTCTAGAGATTTCAACA BG313208Ld05P027F04P027F101F1_05 ----CTGCTTCTTTCA-CTCCCTCCGTTCCTAAATACTTGTCTTTCTAGAGATTTCAACA BG313208As01P027F04P027F101F1_05 ------------------------------------------------------------ BG313208As02P027F04P027F101F1_05 -----TGCTTCTTTCT-------------------------------------------- BG313208Ld04P027F04P027F101F1_05 TAGCCTGCTTCTTTCTACTCCCTCCGTTCCTAAATACTTGTCTTTCTAGAGATTTCAACA BG313208Ld06P027F04P027F101F1_04 TAGCCTGCTTCTTTCT-CTCCCTCCGTTCCTAAATACTTGTCTTTCTAGAGATTTCAACA BG313208Tu01P027F04P027F101F1_03 -TGCCTGCTTCTTTCT-------------------------------------------- BG313208Tu02P027F04P027F101F1_03 --GCCTGCTTCTTTCT-------------------------------------------- BG313208Ld01P027F04P027F101F1_05 ----CTGCTTCTTTCT-------------------------------------------- BG313208Ld10P027F04P027F101F1_05 ----CTGCTTCTTTCT-------------------------------------------- BG313208Ld03P027F04P027F101F1_05 ----CTGCTTCTTTCT-------------------------------------------- BG313208Ld02P027F04P027F101F1_05 -----TGCTTCTTTCT-------------------------------------------- BG313208At02P027F04P027F101F1_06 ------------------------------------------------------------ BG313208Ld07P027F04P027F101F1_06 AGTGACTACATTCGGCGCAAAATGAGTGAATCTACACTTTTAAAATATGTCTACATACAT BG313208Ld09P027F04P027F101F1_06 AGTGACTACATTCGGCGCAAAATGAGTGAATCTACACTTTTAAAATATGTCTACATACAT BG313208Ld08P027F04P027F101F1_06 AGTGACTACATTCGGCGCAAAATGAGTGAATCTACACTTTTAAAATATGTCTACATACAT BG313208Ld05P027F04P027F101F1_05 AGTGACTACATTCGGCGCAAAATGAGTGAATCTACACTTTTAAAATATGTCTACATACAT BG313208As01P027F04P027F101F1_05 ------------------------------------------------------------ BG313208As02P027F04P027F101F1_05 ------------------------------------------------------------ BG313208Ld04P027F04P027F101F1_05 AGTGACTACATTCGGCGCAAAATGAGTGAATCTACACTTTTAAAATATGTCTACATACAT BG313208Ld06P027F04P027F101F1_04 AGTGACTACATTCGGCGCAAAATGAGTGAATCTACACTTTTAAAATATGTCTACATACAT BG313208Tu01P027F04P027F101F1_03 ------------------------------------------------------------ BG313208Tu02P027F04P027F101F1_03 ------------------------------------------------------------ BG313208Ld01P027F04P027F101F1_05 ------------------------------------------------------------ BG313208Ld10P027F04P027F101F1_05 ------------------------------------------------------------ BG313208Ld03P027F04P027F101F1_05 ------------------------------------------------------------ BG313208Ld02P027F04P027F101F1_05 ------------------------------------------------------------ BG313208At02P027F04P027F101F1_06 ---------------------------------------------------------CTA BG313208Ld07P027F04P027F101F1_06 CTGTATGTTGAGTCCATTTGAAATGCCTAGAAAGACAAGTATTTGGGAACGGAGGGAGTA BG313208Ld09P027F04P027F101F1_06 CTGTATGTTGAGTCCATTTGAAATGCCTAGAAAGACAAGTATTTGGGAACGGAGGGAGTA BG313208Ld08P027F04P027F101F1_06 CTGTATGTTGAGTCCATTTGAAATGCCTAGAAAGACAAGTATTTGGGAACGGAGGGAGTA BG313208Ld05P027F04P027F101F1_05 CTGTATGTTGAGTCCATTTGAAATGCCTAGAAAGACAAGTATTTGGGAACGGAGGGAGTA BG313208As01P027F04P027F101F1_05 ------------------------------------------------------------ BG313208As02P027F04P027F101F1_05 ------------------------------------------------------------ BG313208Ld04P027F04P027F101F1_05 CTGTATGTTGAGTCCATTTGAAATGCCTAGAAAGACAAGTATTTGGGAACGGAGGGAGTA BG313208Ld06P027F04P027F101F1_04 CTGTATGTTGAGTCCATTTGAAATGCCTAGAAAGACAAGTATTTGGGAACGGAGGGAGTA BG313208Tu01P027F04P027F101F1_03 ------------------------------------------------------------ BG313208Tu02P027F04P027F101F1_03 ------------------------------------------------------------ BG313208Ld01P027F04P027F101F1_05 ------------------------------------------------------------ BG313208Ld10P027F04P027F101F1_05 ------------------------------------------------------------ BG313208Ld03P027F04P027F101F1_05 ------------------------------------------------------------ BG313208Ld02P027F04P027F101F1_05 ------------------------------------------------------------ BG313208At02P027F04P027F101F1_06 TAATATAACACCCCTCCATTCTGTTGATGTATCTCTTGCAGATTCTGACTGGTTGTTTAC BG313208Ld07P027F04P027F101F1_06 TAATATAACA-CCCTCCATTCTGTTGATGTATCTGTTGCAGATTCTGACCGGTAGTTTAC BG313208Ld09P027F04P027F101F1_06 TAATATAACA-CCCTCCATTCTGTTGATGTATCTGTTGCAGATTCTGACCGGTAGTTTAC BG313208Ld08P027F04P027F101F1_06 TAATATAACA-CCCTCCATTCTGTTGATGTATCTGTTGCAGATTCTGACCGGTAGTTTAC BG313208Ld05P027F04P027F101F1_05 TAATATAACA-CCCTCCATTCTGTTGATGTATCTGTTGCAGATTCTGACCGGTAGTTTAC BG313208As01P027F04P027F101F1_05 ---TATAACACCCCTCCATTCTGTTGATGTATCTGTTGCAGATTCTGACCGGTTGTTTAC BG313208As02P027F04P027F101F1_05 ATATATAACACCCCTCCATTCTGTTGATGTATCTGTTGCAGATTCTGACCGGTTGTTTAC BG313208Ld04P027F04P027F101F1_05 TAATATAACA-CCCTCCATTCTGTTGATGTATCTGTTGCAGATTCTGACCGGTAGTTTAC BG313208Ld06P027F04P027F101F1_04 TAATGTAACA-CCCTCCATTCTGTTGATGTATCTGTTGCAGATTCTGACCGGTAGTTTAC BG313208Tu01P027F04P027F101F1_03 ATATATAACACCCCTCCATTCTGTCGATGTATCTCTTGCAAATTCTGACCGGTTGTTTAC BG313208Tu02P027F04P027F101F1_03 ATATATAACACCCCTCCATTCTGTCGATGTATCTCTTGCAAATTCTGACCGGTTGTTTAC BG313208Ld01P027F04P027F101F1_05 TAATATAACACCCCTCCATTCTGTCGATTTATCTCTTGCAAATTCTGACCGGTTGTTTAC BG313208Ld10P027F04P027F101F1_05 TAATATAACACCCCTCCATTCTGTCGATTTATCTCTTGCAAATTCTGACCGGTTGTTTAC BG313208Ld03P027F04P027F101F1_05 TAATATAACACCCCTCCATTCTGTCGATTTATCTCTTGCAAATTCTGACCGGTTGTTTAC BG313208Ld02P027F04P027F101F1_05 -TATATAACACCCCTCCATTCTGTCGATTTATCTCTTGCAAATTCTGACCGGTTGTTTAC * ***** ************* *** ***** ***** ******** *** ****** BG313208At02P027F04P027F101F1_06 CGATTGCAGGGGAGAGCAGTATATGCAGCCGAGGCTGATAGAATTCGCAATTGGGCTGAA BG313208Ld07P027F04P027F101F1_06 CGATTGCAGGGGAGAGCAGTATATGCAGCCGAGGCTGATAGAATTCGCAATTGGGCTGAA BG313208Ld09P027F04P027F101F1_06 CGATTGCAGGGGAGAGCAGTATATGCAGCCGAGGCTGATAGAATTCGCAATTGGGCTGAA BG313208Ld08P027F04P027F101F1_06 CGATTGCAGGGGAGAGCAGTATATGCAGCCGAGGCTGATAGAATTCGCAATTGGGCTGAA BG313208Ld05P027F04P027F101F1_05 CGATTGCAGGGGAGAGCAGTATATGCAGCCGAGGCTGATAGAATTCGCAATTGGGCTGAA BG313208As01P027F04P027F101F1_05 CGATTGCAGGGGAGAGCAGTATATGCAGCCGAGGCTGATAGAATTCGCAATTGGGCTGAA BG313208As02P027F04P027F101F1_05 CGATTGCAGGGGAGAGCAGTATATGCAGCCGAGGCTGATAGAATTCGCAATTGGGCTGAA BG313208Ld04P027F04P027F101F1_05 CGATTGCAGGGGAGAGCAGTATATGCAGCCGAGGCTGATAGAATTCGCAATTGGGCTGAA BG313208Ld06P027F04P027F101F1_04 CGATTGCAGGGGAGAGCAGTATATGCAGCCGAGGCTGATAGAATTCGCAATTGGGCTGAA BG313208Tu01P027F04P027F101F1_03 TGATTGCAGGGGAGAGCAGTATATGCAGCCGAGGCTGATAGAATTCGCAATTGGGCTGAA BG313208Tu02P027F04P027F101F1_03 TGATTGCAGGGGAGAGCAGTATATGCAGCCGAGGCTGATAGAATTCGCAATTGGGCTGAA BG313208Ld01P027F04P027F101F1_05 TGATTGCAGGGGAGAGCAGTATATGCAGCCGAGGCTGATAGAATTCGCAATTGGGCTGAA BG313208Ld10P027F04P027F101F1_05 TGATTGCAGGGGAGAGCAGTATATGCAGCCGAGGCTGATAGAATTCGCAATTGGGCTGAA BG313208Ld03P027F04P027F101F1_05 TGATTGCAGGGGAGAGCAGTATATGCAGCCGAGGCTGATAGAATTCGCAATTGGGCTGAA BG313208Ld02P027F04P027F101F1_05 TGATTGCAGGGGAGAGCAGTATATGCAGCCGAGGCTGATAGAATTCGCAATTGGGCTGAA *********************************************************** BG313208At02P027F04P027F101F1_06 AGTCGAACACGCATCA-------------------------------------------- BG313208Ld07P027F04P027F101F1_06 AGTCGAACACGCATCTCCTAATC----GAATTCCCGCGGCCGCCATGGCGGCCGGGAGCA BG313208Ld09P027F04P027F101F1_06 AGTCGAACACGCATCTCCTAATC----GAATTCCCGCGGCCGCCATGGCGGCCGGGAGCA BG313208Ld08P027F04P027F101F1_06 AGTCGAACACGCATCTCCTAATC----GAATTCCCGCGGCCGCCATGGCGGCCGGGAGCA BG313208Ld05P027F04P027F101F1_05 AGTCGAACACGCATCTCCTAATC----GAATTCCCGCGGCCGCCATGGCGGCCGGGAGCA BG313208As01P027F04P027F101F1_05 AGTCGAACACGCAT---------------------------------------------- BG313208As02P027F04P027F101F1_05 AGTCGAACACGCAT---------------------------------------------- BG313208Ld04P027F04P027F101F1_05 AGTCGAACACGCATCTCCTAATCACTAGTGAATTCGCGGCCGCCTGCAGGTC---GACCA BG313208Ld06P027F04P027F101F1_04 AGTCGAACACGCATCTCCTAATCACTAGTGAATTCGCGGCCGCCTGCAGGTC---GACCA BG313208Tu01P027F04P027F101F1_03 AGTCGAACACGCAT---------------------------------------------- BG313208Tu02P027F04P027F101F1_03 AGTCGAACACGCAT---------------------------------------------- BG313208Ld01P027F04P027F101F1_05 AGTCGAACACGCATCTCCTAATC----GAATTCCCGCGGCCGCCATGGCGGCCGGGAGCA BG313208Ld10P027F04P027F101F1_05 AGTCGAACACGCATCTCCTAATC----GAATTCCCGCGGCCGCCATGGCGGCCGGGAGCA BG313208Ld03P027F04P027F101F1_05 AGTCGAACACGCATCTCCTAATC----GAATTCCCGCGGCCGCCATGGCGGCCGGGAGCA BG313208Ld02P027F04P027F101F1_05 AGTCGAACACGCATCTCCTAATC----GAATTCCCGCGGCCGCCATGGCGGCCGGGAGCA ************** BG313208At02P027F04P027F101F1_06 ------------------------------------------------------------ BG313208Ld07P027F04P027F101F1_06 TGCGACGTCGGGCCCAATTCGCCCTATAGTGAGTCGTATTACAATTCACTGGC------- BG313208Ld09P027F04P027F101F1_06 TGCGACGTCGGGCCCAATTCGCCCTATAGTGAGTCGTATTACAATTCACTGGCC------ BG313208Ld08P027F04P027F101F1_06 TGCGACGTCGGGCCCAATTCGCCCTATAGTGAGTCGTATTACAATTCACTGGCC------ BG313208Ld05P027F04P027F101F1_05 TGCGACGTCGGGCCCAATTCGCCCTATAGTGAGTCGTATTACAATTCACTGGCC------ BG313208As01P027F04P027F101F1_05 ------------------------------------------------------------ BG313208As02P027F04P027F101F1_05 ------------------------------------------------------------ BG313208Ld04P027F04P027F101F1_05 TATGGGAGAGCTCCCAACGCGTTGGATGCATAGCTTGAGTATTCTATAGTGTCACCTAAA BG313208Ld06P027F04P027F101F1_04 TATGGGAGAGCTCCCAACGCGTTGGATGCATAGCTTGAGTATTCTATAGTGTCACCTAAA BG313208Tu01P027F04P027F101F1_03 ------------------------------------------------------------ BG313208Tu02P027F04P027F101F1_03 ------------------------------------------------------------ BG313208Ld01P027F04P027F101F1_05 TGCGACGTCGGGCCCAATTCGCCCTATAGTGAGTCGTATTACAATTCACTGGCCGTCGTT BG313208Ld10P027F04P027F101F1_05 TGCGACGTCGGGCCCAATTCGCCCTATAGTGAGTCGTATTACAATTCACTGGCCGTCGTT BG313208Ld03P027F04P027F101F1_05 TGCGACGTCGGGCCCAATTCGCCCTATAGTGAGTCGTATTACAATTCACTGGCCGTCGTT BG313208Ld02P027F04P027F101F1_05 TGCGACGTCGGGCCCAATTCGCCCTATAGTGAGTCGTATTACAATTCACTGGCCGTCGTT BG313208At02P027F04P027F101F1_06 --------------------------------- BG313208Ld07P027F04P027F101F1_06 --------------------------------- BG313208Ld09P027F04P027F101F1_06 --------------------------------- BG313208Ld08P027F04P027F101F1_06 --------------------------------- BG313208Ld05P027F04P027F101F1_05 --------------------------------- BG313208As01P027F04P027F101F1_05 --------------------------------- BG313208As02P027F04P027F101F1_05 --------------------------------- BG313208Ld04P027F04P027F101F1_05 TAGCTTGGCGTAATCATGGT------------- BG313208Ld06P027F04P027F101F1_04 TAGCTTGGCGTAATCATGGTCATAGCCTGTTTC BG313208Tu01P027F04P027F101F1_03 --------------------------------- BG313208Tu02P027F04P027F101F1_03 --------------------------------- BG313208Ld01P027F04P027F101F1_05 TTA------------------------------ BG313208Ld10P027F04P027F101F1_05 TTA------------------------------ BG313208Ld03P027F04P027F101F1_05 TTA------------------------------ BG313208Ld02P027F04P027F101F1_05 TTA------------------------------