MUSCLE (3.6) multiple sequence alignment


BG605323As01P003B01B071F1_04.ab1      ---------------------------------------CCGTATGCATCGT--------
BG605323Ln01P003B01B071F1_03.ab1      -------------------TCAATGAGCCGATCTGGAGACCACAGGTGCCACAGTCAATG
BG605323Ln04P003B01B071F1_04.ab1      ------GAGCGATGGTCAATCAATGAGCCGATCTGGAGACCACAGGTGCCACAGTCAATG
BG605323Ln03P003B01B071F1_03.ab1      ------------------ATCAATGAGCCGATCTGGAGACCACAGGTGCCACAGTCAATG
BG605323Tu01P003B01B071F1_03.ab1      ----------GATGGTCAATCAATGAGCCGATCTGGAGACCACAGGTGCCACAGTCAATG
BG605323Ln02P003B01B071F1_04.ab1      TGAAATGAGCGATGGTCAATCAATGAGCCGATCTGGAGACCACAGGTGCCACAGTCAATG
BG605323Ln05P003B01B071F1_03.ab1      TGAAATGAGCGATGGTCAATCAATGAGCCGATCTGGAGACCACAGGTGCCACAGTCAATG
BG605323Ln06P003B01B071F1_04.ab1      ----------GATGGTCAATCAATGAGCCGATCTGGAGACCACAGGTGCCACAGTCAATG
BG605323Ln07P003B01B071F1_03.ab1      TGAAATGAGCGATGGTCAATCAATGAGCCGATCTGGAGACCACAGGTGCCACAGTCAATG
BG605323Ln08P003B01B071F1_04.ab1      -----TGAGCGATGGTCAATCAATGAGCCGATCTGGAGACCACAGGTGCCACAGTCAATG
                                                                             **  * *   *          

BG605323As01P003B01B071F1_04.ab1      --------------TCTGATGCAGA------GGCCGGGGAGTCCCC----CCTTTTCGAA
BG605323Ln01P003B01B071F1_03.ab1      CCAACCCTTTGTTATTTAATACAGATCTTTTGTCTTGAGATTCTCCTTTTCATTTTCTAT
BG605323Ln04P003B01B071F1_04.ab1      CCAACCCTTTGTTATTTAATACAGATCTTTTGTCTTGAGATTCTCCTTTTCATTTTCTAT
BG605323Ln03P003B01B071F1_03.ab1      CCAACCCTTTGTTATTTAATACAGATCTTTTGTCTTGAGATTCTCCTTTTCATTTTCTAT
BG605323Tu01P003B01B071F1_03.ab1      CCAACCCTTTGTTATTTAATACAGATCTTTTGTCTTGAGATTCTCCTTTTCATTTTCTAT
BG605323Ln02P003B01B071F1_04.ab1      CCAACCCTTTGTTATTTAATACAGATCTTTTGTCTTGAGATTCTCCTTTTCATTTTCTAT
BG605323Ln05P003B01B071F1_03.ab1      CCAACCCTTTGTTATTTAATACAGATCTTTTGTCTTGAGATTCTCCTTTTCATTTTCTAT
BG605323Ln06P003B01B071F1_04.ab1      CCAACCCTTTGTTATTTAATACAGATCTTTTGTCTTGAGATTCTCCTTTTCATTTTCTAT
BG605323Ln07P003B01B071F1_03.ab1      CCAACCCTTTGTTATTTAATACAGATCTTTTGTCTTGAGATTCTCCTTTTCATTTTCTAT
BG605323Ln08P003B01B071F1_04.ab1      CCAACCCTTTGTTATTTAATACAGATCTTTTGTCTTGAGATTCTCCTTTTCATTTTCTAT
                                                    * * ** ****      * *  * ** ** **    * ***** * 

BG605323As01P003B01B071F1_04.ab1      GGGGACTATATAGAG------------------AG-------------------------
BG605323Ln01P003B01B071F1_03.ab1      GG---CATTATCGAGTCTTGCTTTGACCGGTTCAGGTTATGATTCCTTTCTTCCTGTTTT
BG605323Ln04P003B01B071F1_04.ab1      GG---CATTATCGAGTCTTGCTTTGACCGGTTCAGGTTATGATTCCTTTCTTCCTGTTTT
BG605323Ln03P003B01B071F1_03.ab1      GG---CATTATCGAGTCTTGCTTTGACCGGTTCAGGTTATGATTCCTTTCTTCCTGTTTT
BG605323Tu01P003B01B071F1_03.ab1      GG---CATTATCGAGTCTTGCTTTGGCCGGTTCAGGTTATGATTCCTTTCTTCCTGTTTT
BG605323Ln02P003B01B071F1_04.ab1      GG---CATTATCGAGTCTTGCTTTGACCGGTTCAGGTTATGATTCCTTTCTTCCTGTTTT
BG605323Ln05P003B01B071F1_03.ab1      GG---CATTATCGAGTCTTGCTTTGACCGGTTCAGGTTATGATTCCTTTCTTCCTGTTTT
BG605323Ln06P003B01B071F1_04.ab1      GG---CATTATCGAGTCTTGCTTTGACCGGTTCAGGTTATGATTCCTTTCTTCCTGTTTT
BG605323Ln07P003B01B071F1_03.ab1      GG---CATTATCGAGTCTTGCTTTGACCGGTTCAGGTTATGATTCCTTTCTTCCTGTTTT
BG605323Ln08P003B01B071F1_04.ab1      GG---CATTATCGAGTCTTGCTTTGACCGGTTCAGGTTATGATTCCTTTCTTCCTGTTTT
                                      **   *  *** ***                  **                         

BG605323As01P003B01B071F1_04.ab1      ------AAAAATGATGTATTTGCAAACAAACC------TCATGGCTCCATGAT--CCATG
BG605323Ln01P003B01B071F1_03.ab1      TCTTTTGAACATAGGGAACTTCTCAAGGGACCACTGTATTATGCCACTACTATAACTTTG
BG605323Ln04P003B01B071F1_04.ab1      TCTTTTGAACATAGGGAGCTTCTCAAGGGACCACTGTATTATGCCACTACTATAACTTTG
BG605323Ln03P003B01B071F1_03.ab1      TCTTTTGAACATAGGGAACTTCTCAAGGGACCACTGTATTATGCCACTACTATAACTTTG
BG605323Tu01P003B01B071F1_03.ab1      TCTTTTGAACATAGGGAACTTCTCAAGGGACCACTGTATTATGCCACTACTATAACTTTG
BG605323Ln02P003B01B071F1_04.ab1      TCTTTTGAACATAGGGAACTTCTCAAGGGACCACTGTATTATGCCACTACTATAACTTTG
BG605323Ln05P003B01B071F1_03.ab1      TCTTTTGAACATAGGGAACTTCTCAAGGGACCACTGTATTATGCCACTACTATAACTTTG
BG605323Ln06P003B01B071F1_04.ab1      TCTTTTGAACATAGGGAACTTCTCAAGGGACCACTGTATTATGCCACTACTATAACTTTG
BG605323Ln07P003B01B071F1_03.ab1      TCTTTTGAACATAGGGAACTTCTCAAGGGACCACTGTATTATGCCACTACTATAACTTTG
BG605323Ln08P003B01B071F1_04.ab1      TCTTTTGAACATAGGGAACTTCTCAAGGGACCACTGTATTATGCCACTACTATAACTTTG
                                             ** **   *   **   **   ***      * *** * * *  **  *  **

BG605323As01P003B01B071F1_04.ab1      TGCA-------GTTTTGAAGAATCTCACCATGTTGCTTGCTAAAGCAC------------
BG605323Ln01P003B01B071F1_03.ab1      GCCACTTCTGTATTGTGGAGAACATCCCCA-----ATTGCTATAGCACTTGTCTGCAACT
BG605323Ln04P003B01B071F1_04.ab1      GCCACTTCTGTATTGTGGAGAACATCCCCA-----ATTGCTATAGCACTTGTCTGCAACT
BG605323Ln03P003B01B071F1_03.ab1      GCCACTTCTGTATTGTGGAGAACATCCCCA-----ATTGCTATAGCACTTGTCTGCAACT
BG605323Tu01P003B01B071F1_03.ab1      GCCACTTCTGTATTGTGGAGAACATCCCCA-----ATTGCTATAGCACTTGTCTGCAACT
BG605323Ln02P003B01B071F1_04.ab1      GCCACTTCTGTATTGTGGAGAACATCCCCA-----ATTGCTATAGCACTTGTCTGCAACT
BG605323Ln05P003B01B071F1_03.ab1      GCCACTTCTGTATTGTGGAGAACATCCCCA-----ATTGCTATAGCACTTGTCTGCAACT
BG605323Ln06P003B01B071F1_04.ab1      GCCACTTCTGTATTGTGGAGAACATCCCCA-----ATTGCTATAGCACTTGTCTGCAACT
BG605323Ln07P003B01B071F1_03.ab1      GCCACTTCTGTATTGTGGAGAACATCCCCA-----ATTGCTATAGCACTTGTCTGCAACT
BG605323Ln08P003B01B071F1_04.ab1      GCCACTTCTGTATTGTGGAGAACATCCCCA-----ATTGCTATAGCACTTGTCTGCAACT
                                        **        ** ** ****  ** ***      ****** *****            

BG605323As01P003B01B071F1_04.ab1      -AGCCAACAGAGGGGGTG------------------TCCTTTGATGGGTCATGTAAAAA-
BG605323Ln01P003B01B071F1_03.ab1      TATGCGCTGGAGATGGTACGTGCATGTATCTGCATTTCACACTATATGTCCTAGAACAAA
BG605323Ln04P003B01B071F1_04.ab1      TATGCGCTGGAGATGGTACGTGCATGTATCTGCATTTCACACTATATGTCCTAGAACAAA
BG605323Ln03P003B01B071F1_03.ab1      TATGCGCTGGAGATGGTACGTGCATGTATCTGCATTTCACACTATATGTCCTAGAACAAA
BG605323Tu01P003B01B071F1_03.ab1      TATGCGCTGGAGATGGTACGTGCATGTATCTGCATTTCACACTATATGTCCTAGAACAAA
BG605323Ln02P003B01B071F1_04.ab1      TATGCGCTGGAGATGGTACGTGCATGTATCTGCATTTCACACTATATGTCCTAGAACAAA
BG605323Ln05P003B01B071F1_03.ab1      TATGCGCTGGAGATGGTACGTGCATGTATCTGCATTTCACACTATATGTCCTAGAACAAA
BG605323Ln06P003B01B071F1_04.ab1      TATGCGCTGGAGATGGTACGTGCATGTATCTGCATTTCACACTATATGTCCTAGAACAAA
BG605323Ln07P003B01B071F1_03.ab1      TATGCGCTGGAGATGGTACGTGCATGTATCTGCATTTCACACTATATGTCCTAGAACAAA
BG605323Ln08P003B01B071F1_04.ab1      TATGCGCTGGAGATGGTACGTGCATGTATCTGCATTTCACACTATATGTCCTAGAACAAA
                                       *  *    ***  ***                   **     **  *** *  ** ** 

BG605323As01P003B01B071F1_04.ab1      ---------------------------------CCTCAC-------CTGCAAAGAAAATA
BG605323Ln01P003B01B071F1_03.ab1      TTTTTATCTTGCGCAACATAATCTGCTGCCTATCTTCACACTGTGGCTGTGAACAGTATG
BG605323Ln04P003B01B071F1_04.ab1      TTTTTATCTTGCGCAACATAATCTGTTGCCTATCTTCACAC--TGGCTGTAAACAGTATG
BG605323Ln03P003B01B071F1_03.ab1      TTTTTATCTTGCGCAACATAATCTGCTGCCTATCTTCACACTGTGGCTGTAAACAGTATG
BG605323Tu01P003B01B071F1_03.ab1      TTTTTATCTTGCGCAACATAATCTGCTGCCTATCTTCACACTGTGGCTGTAAACAGTATG
BG605323Ln02P003B01B071F1_04.ab1      -TTTTATCTTGCGCAACATAATCTGCTGCCTATCTTCACACTGTGGCTGTAAACAGTATG
BG605323Ln05P003B01B071F1_03.ab1      TTTTTATCTTGCGCAACATAATCTGCTGCCTATCTTCACACTGTGGCTGTAAACAGTATG
BG605323Ln06P003B01B071F1_04.ab1      TTTTTATCTTGCGCAACATAATCTGCTGCCTATCTTCACACTGTGGCTGTAAACAGTATG
BG605323Ln07P003B01B071F1_03.ab1      TTTTTATCTTGCGCAACATAATCTGCTGCCTATCTTCACACTGTGGCTGTAAACAGTATG
BG605323Ln08P003B01B071F1_04.ab1      TTTTTATCTTGCGCAACATAATCTGCTGCCTATCTTCACACTGTGGCTGTAAACAGTATG
                                                                       * ****       ***  ** *  ** 

BG605323As01P003B01B071F1_04.ab1      AAAAAAGAACT-GTGGCT-----------------------ATAGGATATGGGGGCGCCC
BG605323Ln01P003B01B071F1_03.ab1      CCAAAAGAATTAGCTGCTTCGCCCTTCCTAGACGAAAGCAGATATGATTAGGCTGTTCAC
BG605323Ln04P003B01B071F1_04.ab1      CCAAAAGAATTAGCTGCTTCGCCCTTCCTAGACGAAAGCAGATATAATTAGGCTGTTCAC
BG605323Ln03P003B01B071F1_03.ab1      CCAAAAGAATCAGCTGCTTCGCCCTTCCTAGACGAAAGCAGATATAATTAGGCTGTTCAC
BG605323Tu01P003B01B071F1_03.ab1      CCAAAAGAATCAGCTGCTTCGCCCTTCCTAGACGAAAGCAGATATAATTAGGCTGTTCAC
BG605323Ln02P003B01B071F1_04.ab1      CCAAAAGAATCAGCTGCTTCGCCCTTCCTAGACGAAAGCAGATATAATTAGGCTGTTCAC
BG605323Ln05P003B01B071F1_03.ab1      CCAAAAGAATCAGCTGCTTCGCCCTTCCTAGACGAAAGCAGATATAATTAGGCTGTTCAC
BG605323Ln06P003B01B071F1_04.ab1      CCAAAAGAATCAGCTGCTTCGCCCTTCCTAGACGAAAGCAGATATAATTAGGCTGTTCAC
BG605323Ln07P003B01B071F1_03.ab1      CCAAAAGAATCAGCTGCTTCGCCCTTCCTAGACGAAAGCAGATATAATTAGGCTGTTCAC
BG605323Ln08P003B01B071F1_04.ab1      CCAAAAGAATCAGCTGCTTCGCCCTTCCTAGACGAAAGCAGATATAATTAGGCTGTTCAC
                                        *******   *  ***                       ***  **  **  *  * *

BG605323As01P003B01B071F1_04.ab1      TATTAGACTCCG-ATACTT---------------GTACTTGATAGTTG------------
BG605323Ln01P003B01B071F1_03.ab1      CCTTCGTCGCTGTATGCTTCCCGGTATAGCAGACGTAGTTGGGAGACGCTTTGGAATCAC
BG605323Ln04P003B01B071F1_04.ab1      CCTTCGTCGCTGTATGCTTCCAGGTATAGCAGACGTAGTTGGGAGACGCTTTGGAATCAC
BG605323Ln03P003B01B071F1_03.ab1      CCTTCGGCGCTGTATGCTTCCAGGTATAGCAGACGTAGTTGGGAGACGCTTTGGTCTTGA
BG605323Tu01P003B01B071F1_03.ab1      CCTTCGTCGCTGTATGCTTCCAGGTATAGCAGACGTAT----------------------
BG605323Ln02P003B01B071F1_04.ab1      CCTTCGGCGCTGTATGCTTCCAGGTATAGCAGACGTAGTTGGGAGACGCTTTGGAATCAC
BG605323Ln05P003B01B071F1_03.ab1      CCTTCGGCGCTGTATGCTTCCAGGTATAGCAGACGTAGTTGGGAGACGCTTTGGAATCAC
BG605323Ln06P003B01B071F1_04.ab1      CCTTCGGCGCTGTATGCTTCCAGGTATAGCAGACGTAGTTGGGAGACGCTTTGGAATCAC
BG605323Ln07P003B01B071F1_03.ab1      CCTTCGGCGCTGTATGCTTCCAGGTATAGCAGACGTAGTTGGGAGACGCTTTGGAATCAC
BG605323Ln08P003B01B071F1_04.ab1      CCTTCGGCGCTGTATGCTTCCAGGTATAGCAGACGTAGTTGGGAGACGCTTTGGAATCAC
                                        ** * * * * ** ***               ***                       

BG605323As01P003B01B071F1_04.ab1      ------------------------------------------------------------
BG605323Ln01P003B01B071F1_03.ab1      TAGTGAATTCGCGGCCGCCTGCAGGTCTACCATATGGGAGAGCTCCCAACGCGTTGG---
BG605323Ln04P003B01B071F1_04.ab1      TAGTGAATTCGCGGCCGCCTGCAGGTCGACCATATGGGAGAGCTCCCAACGCGTTGG---
BG605323Ln03P003B01B071F1_03.ab1      GATTCTCCTTTTCATTTTCTATGG---GATTATCGAGTCTTGCTTTGACCGGCTCAGGTT
BG605323Tu01P003B01B071F1_03.ab1      ------------------------------------------------------------
BG605323Ln02P003B01B071F1_04.ab1      TAGTGAATTCGCGGCCGCCTGCAGGTCGACCATATGGGAGAGCTCCCAACGCGTTGG---
BG605323Ln05P003B01B071F1_03.ab1      TAGTGAATTCGCGGCCGCCTGCAGGTCGACCATATGGGAGAGCTCCCAACGCGTTGG---
BG605323Ln06P003B01B071F1_04.ab1      TAGTGAATTCGCGGCCGCCTGCAGGTCGACCATATGGGAGAGCTCCCAACGCGTTGG---
BG605323Ln07P003B01B071F1_03.ab1      TAGTGAATTCGCGGCCGCCTGCAGGTCGACCATATGGGAGAGCTCCCAACGCGTTGG---
BG605323Ln08P003B01B071F1_04.ab1      TAGTGAATTCGCGGCCGCCTGCAGGTCGACCATATGGGAGAGCTCCCAACGCGTTGG---
                                                                                                  

BG605323As01P003B01B071F1_04.ab1      ATA------------------------------------------------
BG605323Ln01P003B01B071F1_03.ab1      ATGCATA--------------------------------------------
BG605323Ln04P003B01B071F1_04.ab1      ATGCATAGCTTGAGTATTCTATAGTGTC--ACCTAAATAGC----------
BG605323Ln03P003B01B071F1_03.ab1      ATGATTCCTTTCTTCCTGCTATTCTGTTGAACATAGGGAACTTCTCAGGGA
BG605323Tu01P003B01B071F1_03.ab1      ---------------------------------------------------
BG605323Ln02P003B01B071F1_04.ab1      ATGCATAGCTTGAGTATTCTATAGTGTC--ACCTAAATAGC----------
BG605323Ln05P003B01B071F1_03.ab1      ATGCATAGCTTGAGTATTCTATAGTGTC--ACCTAAATAGC----------
BG605323Ln06P003B01B071F1_04.ab1      ATGCATAGCTTGAGTATTCTATAGTGTC--ACCTAAATAGC----------
BG605323Ln07P003B01B071F1_03.ab1      ATGCATAGCTTGAGTATTCTATAGTGTC--ACCTAAATAGC----------
BG605323Ln08P003B01B071F1_04.ab1      ATGCATAGCTTGAGTATTCTATAGTGTC--ACCTAAATAGC----------