MUSCLE (3.6) multiple sequence alignment BG607203TU01P040D02D081R1_076.ab ------------------------------------------------------------ BG607203LD05P040D02D081R1_087.ab ------------------------------------------------------------ BG607203AS02P040D02D081R1_070.ab ----------------------------------GTTCGCATCAACAAATGTGCGACTTA BG607203LD01P040D02D081R1_095.ab --TGGCCATAACCTGTTAAGGTACAGCCATACAGGACCACTTCAACAAATGTGCAACTTA BG607203TU02P040D02D081R1_074.ab ---------------------------CATACAGGATCACTTCAACAAATGTGCAACTTA BG607203LD02P040D02D081R1_093.ab GTTGGCCATAACCTGTTAAGGTACAGCCATACAGGATCCCTTC-ACAAATGTGCAACTTA BG607203LD03P040D02D081R1_091.ab ------------------------AGCCATACAGGATCCCTTC-ACAAATGTGCAACTTA BG607203LD04P040D02D081R1_089.ab ---------AACCTGTTAAGGTACAGCCATACAGGATCCCTTC-ACAAATGTGCAACTTA BG607203AT01P040D02D081R1_068.ab ----------------------------------GATCACTTCAACAAATGTGCAACTTA BG607203AT02P040D02D081R1_066.ab ------------------------AGCCATACAGGATCACTTCAACAAATGTGCAACTTA BG607203TU01P040D02D081R1_076.ab ------------------------------------------------------------ BG607203LD05P040D02D081R1_087.ab ----------GGCCATAACCT---------------------GTTAAGTAGCACACACAT BG607203AS02P040D02D081R1_070.ab ACTAGATGCTGGGCGCAACATTTTCCATTG-AAAAACATCTAGTTAAGTAGCACAAGCAT BG607203LD01P040D02D081R1_095.ab ACTAGATGCTGGGCGCAACATTTTCCATTG-AAAAATATCTAGTTAAGTAGCACAAGCAT BG607203TU02P040D02D081R1_074.ab ACTAGATGCTGGGCGCAACATTTTCCATTGAAAAAATATCTAGTTAAGTAGCACAAGCAT BG607203LD02P040D02D081R1_093.ab ACTAGATTCTGGGCGCAACGTTTTCCATTGAAAAAGCATCTAGTTAAGTAGCACAAGCAT BG607203LD03P040D02D081R1_091.ab ACTAGATTCTGGGCGCAACGTTTTCCGTTGAAAAAACATCTAGTTAAGTAGCACAAGCAT BG607203LD04P040D02D081R1_089.ab ACTAGATTCTGGGCGCAACGTTCTCCATTGAAAAAACATCTAGTTAAGTAGCACAAGCAT BG607203AT01P040D02D081R1_068.ab ---------------CAACATTTTCCATTGAAAAAACATCTAGTTAAGTAGCACAAGCAT BG607203AT02P040D02D081R1_066.ab ---------------CAACATTTTCCATTGAAAAAACATCTAGTTAAGTAGCACAAGCAT BG607203TU01P040D02D081R1_076.ab ------------------------------------------------------------ BG607203LD05P040D02D081R1_087.ab G----------------------------------------------------------- BG607203AS02P040D02D081R1_070.ab GTAATTGG---TATATGGTTACAGAAAGCTACATCTTGAACAATGGCTAGCCGAACTTCT BG607203LD01P040D02D081R1_095.ab GTAATTGG---TATACGGATACAGAAAGCTACATCTTGAACAATGGCTAGCCGAACTTCT BG607203TU02P040D02D081R1_074.ab GTAATTGG---TATACGGATACAGAAAGCTACATCTTGAACAATGGCTAGCCGAACTTCT BG607203LD02P040D02D081R1_093.ab GTAATTGGTACTATTTGGATACAGAAAGCTCCATCTTGAACAATGGCTAGCTGAACTTCT BG607203LD03P040D02D081R1_091.ab GTAATTGGTACTATTTGGATACAGAAAGCTCCATCTTGAACAATGGCTAGCTGAACTTCT BG607203LD04P040D02D081R1_089.ab GTAATTGGTACTATTTGGATACAGAAAGCTCCATCTTGAACAATGGCTAGCTGAACTTCT BG607203AT01P040D02D081R1_068.ab GTAATTGG---TATTTGGATACAGAAAGCTCCGTCTTGAATAATGGCTAGCTGAACTTCT BG607203AT02P040D02D081R1_066.ab GTAATTGG---TATTTGGATACAGAAAGCTCCGTCTTGAACAATGGCTAGCTGAACTTCT BG607203TU01P040D02D081R1_076.ab ------------------------------------------------------------ BG607203LD05P040D02D081R1_087.ab ------------------------------------------------------------ BG607203AS02P040D02D081R1_070.ab GAAGAGAAATGACAATTCAGAACAGTGACAGACTAAACTGGAACTGATAGCTTGTTTTAC BG607203LD01P040D02D081R1_095.ab GAAGAGAAATGACAATTCAGAACAGTGACAGACTAAACTGGAACTGATAGCTTGTTTTAC BG607203TU02P040D02D081R1_074.ab GAAGAGAAATGACAATTCAGAACAGTGACAGACTAAACTGGAACTGATAGCTTGTTTTAC BG607203LD02P040D02D081R1_093.ab GAAGATAAATGACAATTCAGGACAATGACAGACTAAACTGGAAC-------TTGTTTTAC BG607203LD03P040D02D081R1_091.ab GAAGATAAATGACAATTCAGGACAATGACAGACTAAACTGGAAC-------TTGTTTTAC BG607203LD04P040D02D081R1_089.ab GAAGATAAATGACAATTCAGGACAATGACAGACTAAACTGGAAC-------TTGTTTTAC BG607203AT01P040D02D081R1_068.ab GAAGAGAAATGACAATTCACAAAAATGACAGACTAAACTGGAACTGATAGTTTGTTTTAC BG607203AT02P040D02D081R1_066.ab GAAGAGAAATGACAATTCAGAAAAATGACAGACTAAACTGGAACTGATAGTTTGTTTTAC BG607203TU01P040D02D081R1_076.ab ------------------------------------------------------------ BG607203LD05P040D02D081R1_087.ab -----------------------GTTTCTAATGTTGGATTAATAAAGAGTAGAATAAAAG BG607203AS02P040D02D081R1_070.ab ACAGTTAGTTAGACATCATGTTGGTTTCTAATGTTGGATTCATAAAGAGTAGAATATAAG BG607203LD01P040D02D081R1_095.ab ATAGTTAGTTAGACATCATGTTGGTTTCTAATGTTGGATTAATAAAGAGTAGAATAAAAG BG607203TU02P040D02D081R1_074.ab ATAGTTAGTTAGACATCATGTTGGTTTCTAATGTTGGATTAATAAAGAGTAGAATAAAAG BG607203LD02P040D02D081R1_093.ab ACAGTTAGTTAGACATCATGTTGGTTTCGAATGTTGGATTAATAAAGAGTAG-ACTAAAG BG607203LD03P040D02D081R1_091.ab ACAGTTAGTTAGACATCATGTTGGTTTCGAATGTTGGATTAATAAAGAGTAG-ACTAAAG BG607203LD04P040D02D081R1_089.ab ACAGTTAGTTAGACATCATGTTGGTTTCGAATGTTGGATTAATAAAGAGTAG-ACTAAAG BG607203AT01P040D02D081R1_068.ab ACAGTTAGTTAGACATC-------------ATGTTGGATTAATAAAGAGTAG-ATAAAAG BG607203AT02P040D02D081R1_066.ab ACAGTTAGTTAGACATCATGTTGGTTTGTAATGTTGGATTAATAAAGAGTAG-ATAAAAG BG607203TU01P040D02D081R1_076.ab ------------------------------------------------------------ BG607203LD05P040D02D081R1_087.ab GTCCAAACAAGCGCAATTAGCTTCAACTTTGCCTGACCATTCAATCTCATAGAGAAAGAA BG607203AS02P040D02D081R1_070.ab GTCCAAACAAGTGCAATTAGCTTCAACTTTGCATGACCATTCAATCTCAT--AGAAAGAA BG607203LD01P040D02D081R1_095.ab GTCCAAGCAAGTGCAATTAGCTTCAACTTTGCATGACCATTCAATCTCATAGAGAAAGAA BG607203TU02P040D02D081R1_074.ab GTCCAAGCAAGTGCAATTAGCTTCAACTTTGCATGACCATTCAATCTCATAGAGAAAGAA BG607203LD02P040D02D081R1_093.ab GTCCAAACAAGCGCAATTAGCTTCAACTTTGCCTGACCATTCAATCTCATAGAGAAAGAA BG607203LD03P040D02D081R1_091.ab GTCCAAACAAGCGCAATTAGCTTCAACTTTGCCTGACCATTCAATCTCATAGAGAAAGAA BG607203LD04P040D02D081R1_089.ab GTCCAAACAAGCGCAATTAGCTTCAACTTTGCCTGACCATTCAATCTCATAGAGAAAGAA BG607203AT01P040D02D081R1_068.ab ACCCAAACAAGCGCAA----CTTCAACTTTGCCTGA-CATTCAATCTCATAGAGAAAGAA BG607203AT02P040D02D081R1_066.ab ACCCAAACAAGCGCAA----CTTCAACTTTGCCTGA-CATTCAATCTCATAGAGAAAGAA BG607203TU01P040D02D081R1_076.ab ------------------------------------------------------------ BG607203LD05P040D02D081R1_087.ab ATCACATGATGTGAAACTTCCCTACACAAAGGACATTATTGAACAAACTAAGCATGAGTT BG607203AS02P040D02D081R1_070.ab ATCACATGATGTGAG--------AGACAAAGGACATTATTGAACAAACTAAGCATGTGTT BG607203LD01P040D02D081R1_095.ab ACCACATGATGTGAA--------ATACAAAGGACATTATTGAACAAACTAAGCATGAGTT BG607203TU02P040D02D081R1_074.ab ACCACATGATGTGAA--------ATACAAAGGACATTATTGAACAAACTAAGCATGAGTT BG607203LD02P040D02D081R1_093.ab ATCACATGATGTGAAACTTCCCTACACAAAGGACATTATTGAACAAACTAAGCATGAG-T BG607203LD03P040D02D081R1_091.ab ATCACATGATGTGAAACTTCCCTACACAAAGGACATTATTGAACAAACTAAGCATGAG-T BG607203LD04P040D02D081R1_089.ab ATCACATGATGTGAAACTTCCCTACACAAAGGACATTATTGAACAAACTAAGCATGAG-T BG607203AT01P040D02D081R1_068.ab ATCATATGATGTGAAACTTCCCTACACAAAGGACATTATTGAACAAACTAAGCATGGATT BG607203AT02P040D02D081R1_066.ab ATCATATGATGTGAAACTTCCCTACACAAAGGACATTATTGAACAAACTAAGCATGGATT BG607203TU01P040D02D081R1_076.ab ------------------------------------------------------------ BG607203LD05P040D02D081R1_087.ab TTTTAGGCTAACGCTAAAACAGACAATGGCACCAGCAATAACGCAGATAGTGGCAACAAT BG607203AS02P040D02D081R1_070.ab TATTAGGCTAACGCTAAAACAGACAATGGCATCAGCAATAACGCAGATAGTGGCAACAAT BG607203LD01P040D02D081R1_095.ab TTTTAGGCTAACGCTAAAACAGACAATGGCACCAGCAATAACGCAGATNGTGGCAACAAT BG607203TU02P040D02D081R1_074.ab TTTTAGGCTAACGCTAAAACAGACAATGGCACCAGCAATAACGCAGATAGTGGCAACAAT BG607203LD02P040D02D081R1_093.ab TTTTAGGCTAACGCTAAAACAGACAATGGCAGCAGCAATAACGCGGATAGTGGCAACAAT BG607203LD03P040D02D081R1_091.ab TTTTAGGCTAACGCTAAAACAGACAATGGCAGCAGCAATAACGCAGATAGTGGCAACAAT BG607203LD04P040D02D081R1_089.ab TTTTAGGCTAACGCTAAAACAGACAATGGCAGCAGCAATAACGCAGATAGTGGCAACAAT BG607203AT01P040D02D081R1_068.ab TTTTAGGCTAACGCTAAAACAGACAATGTCAGCAGCAATAACGCAGATAGTTGCAACAAT BG607203AT02P040D02D081R1_066.ab TTTTAGGCTAACGCTAAAACAGACAATGTCAGCAGCAATAACGCAGATAGTTGCAACAAT BG607203TU01P040D02D081R1_076.ab -------------------------GACGCCCATGAAACATGAGATTGGATCTTTCTAAT BG607203LD05P040D02D081R1_087.ab AGTGCTCCTATTTTGATTCGTATGAAGCGCCCATGAAACATGAGATTGTATCTTTCTAAT BG607203AS02P040D02D081R1_070.ab AGTACCCCT-TTTTTATTTGTATGAAGCGCCCATGAAACATGAGATTCTATCTTTCTAAT BG607203LD01P040D02D081R1_095.ab AGTACCCCT-TTTTGATTTGTATGAAGCGCCCATGAAACATGAGATTCTATC-------- BG607203TU02P040D02D081R1_074.ab AGTACCCCT-TTTTGATCTGTATGAAGCGCCCATGAAACATGAGATTCTATCTTTCTAAT BG607203LD02P040D02D081R1_093.ab AGTACTCCTATNTTGATTTGTATGAAGCGCCCATGAAACATGAGATTCTATCTTTCTAAT BG607203LD03P040D02D081R1_091.ab AGTACTCCTATTTTGATTTGTATGAAGCGCCCATGAAACATGAGATTCTATCTTTCTAAT BG607203LD04P040D02D081R1_089.ab AGTACTCCTATNTTGATTTGTATGAAGCGCCCATGAAACATGAGATTCTATCTNTCTAAT BG607203AT01P040D02D081R1_068.ab AGTACTCCTATTTTTATCTGTATGAAGTGCCCATGAAACATGAGATTCTATCTTTCTATT BG607203AT02P040D02D081R1_066.ab AGTA-TCCTATTTTTATCTGTATGAAGTGCCCATGAAACATGAGATTCTATCTTTCTATT ******************* *** BG607203TU01P040D02D081R1_076.ab GTTTGACCAATATATAGTCGAACGATATAAAGGTTTAGTAAATATGCCCCGTGTTTAAAT BG607203LD05P040D02D081R1_087.ab GTTTGACCAATATATAGTCAAACAATATAAAGGTTTAGTAAATATGCCCCGTGTTTAAAT BG607203AS02P040D02D081R1_070.ab GTTTGACAAATAGATAGT------------------------------------------ BG607203LD01P040D02D081R1_095.ab ------------------------------------------------------------ BG607203TU02P040D02D081R1_074.ab GTTTGACCAATAGATAGTCAAACAATAGAAAGGTTTAGTAAATATGCCCCGTGTCT---- BG607203LD02P040D02D081R1_093.ab GGTTAATCAATAGATAGTCAAACCATATAAAGGTTTAGTAAATATATCCCATGTTTTAAT BG607203LD03P040D02D081R1_091.ab GTTTAATCAATAGATAGTCAAACAATATAAAGGTTTAGTAAATATATCCCATGTTTAAAT BG607203LD04P040D02D081R1_089.ab GTTTAATCAATAGATAGTCAAACAATATAAAGGTTTAGTAAATATATCCCATGTTTAAAT BG607203AT01P040D02D081R1_068.ab GTTTAACCAATAGATAGTCAAACAATATAAAGGTTTAGTATATATGCCCCGTGTTTAAAT BG607203AT02P040D02D081R1_066.ab GTTTAACCAATAGATAGTCAAACAATATAAAGGTTTAGTAAATATGC------------- BG607203TU01P040D02D081R1_076.ab GTGCTTTCCACGCTGTCATAATTTTCTTGATAGGTACAAACAATATATTGGAAAAGAAAT BG607203LD05P040D02D081R1_087.ab GTGCTTTCCACGCTGTCATAACTTTCTTGATAGGTACAAACAATATATTGGAAAAGAAAT BG607203AS02P040D02D081R1_070.ab ------------------------------------------------------------ BG607203LD01P040D02D081R1_095.ab ------------------------------------------------------------ BG607203TU02P040D02D081R1_074.ab ------------------------------------------------------------ BG607203LD02P040D02D081R1_093.ab GTGCTTTTCACACTGTCACAATT----------GTACA---------------------- BG607203LD03P040D02D081R1_091.ab GTGCTTTTCACACTGTCACAAATT---------GTACAAAC-ATATATTGGAAA------ BG607203LD04P040D02D081R1_089.ab GTGCTTTTCACACTGTCACAAAT----------GTACA---------------------- BG607203AT01P040D02D081R1_068.ab GTGCTTTTCACGCTGTCACAATTTTCTTGATAGGTACAAACAATATATTGGAAAAGAAAT BG607203AT02P040D02D081R1_066.ab ------------------------------------------------------------ BG607203TU01P040D02D081R1_076.ab TTATGGTGAAAGTTTAATTTTGTCAAGGTGCCGACTCAAACGCATCTTATAAGAATCAAA BG607203LD05P040D02D081R1_087.ab TTATGGTTAAAGTTTAATTTTGTCAAGGTGCCAACTCAAACGCATCTTATAAGAATCAAA BG607203AS02P040D02D081R1_070.ab ------------------------------------------------------------ BG607203LD01P040D02D081R1_095.ab ------------------------------------------------------------ BG607203TU02P040D02D081R1_074.ab ------------------------------------------------------------ BG607203LD02P040D02D081R1_093.ab ------------------------------------------------------------ BG607203LD03P040D02D081R1_091.ab ------------------------------------------------------------ BG607203LD04P040D02D081R1_089.ab ------------------------------------------------------------ BG607203AT01P040D02D081R1_068.ab TTATGGTTAAAGTTTAATTTTATCAAG--------------------------------- BG607203AT02P040D02D081R1_066.ab ------------------------------------------------------------ BG607203TU01P040D02D081R1_076.ab AGATGGAGTACTACATTCCAGATTTGGGAAGACTGCCAAGTAGAAATGCAACTTACAGAC BG607203LD05P040D02D081R1_087.ab AGATGGAGTACTACATTCCAGATNTGGGAAGACTGCCAAATAGAAATGCAACTTACAGGC BG607203AS02P040D02D081R1_070.ab ------------------------------------------------------------ BG607203LD01P040D02D081R1_095.ab ------------------------------------------------------------ BG607203TU02P040D02D081R1_074.ab ------------------------------------------------------------ BG607203LD02P040D02D081R1_093.ab ------------------------------------------------------------ BG607203LD03P040D02D081R1_091.ab ------------------------------------------------------------ BG607203LD04P040D02D081R1_089.ab ------------------------------------------------------------ BG607203AT01P040D02D081R1_068.ab ------------------------------------------------------------ BG607203AT02P040D02D081R1_066.ab ------------------------------------------------------------ BG607203TU01P040D02D081R1_076.ab GGAGCACAGAGTTGCCCTTCCTTGAT---------------------------------- BG607203LD05P040D02D081R1_087.ab GGAGCACAGAATTGCCCTTCCTTGATGGTGATAATCTTCCCAGTCTTAGCCGCAGCCACT BG607203AS02P040D02D081R1_070.ab ------------------------------------------------------------ BG607203LD01P040D02D081R1_095.ab ------------------------------------------------------------ BG607203TU02P040D02D081R1_074.ab ------------------------------------------------------------ BG607203LD02P040D02D081R1_093.ab ------------------------------------------------------------ BG607203LD03P040D02D081R1_091.ab ------------------------------------------------------------ BG607203LD04P040D02D081R1_089.ab ------------------------------------------------------------ BG607203AT01P040D02D081R1_068.ab ------------------------------------------------------------ BG607203AT02P040D02D081R1_066.ab ------------------------------------------------------------ BG607203TU01P040D02D081R1_076.ab -------------- BG607203LD05P040D02D081R1_087.ab AAATCGAATTCCCG BG607203AS02P040D02D081R1_070.ab -------------- BG607203LD01P040D02D081R1_095.ab -------------- BG607203TU02P040D02D081R1_074.ab -------------- BG607203LD02P040D02D081R1_093.ab -------------- BG607203LD03P040D02D081R1_091.ab -------------- BG607203LD04P040D02D081R1_089.ab -------------- BG607203AT01P040D02D081R1_068.ab -------------- BG607203AT02P040D02D081R1_066.ab --------------