MUSCLE (3.6) multiple sequence alignment BM134465Ld04P003D06P003D121F1_00 ATCTCAGAATGCGGGGCTTATTGTTTGG-TTAATACTGCAAACTCTTTCTCAAAAGGAAG BM134465Ld02P003D06P003D121F1_00 ---------TGCGGAGCTTATTGTTTGG-TTAATACTGCAAACTCTTTCTCAAAAGGAAG BM134465Ld09P003D06P003D121F1_02 --------ATGCGGAGCTTATTGTTTGG-TTAATACTGCAAACTCTTTCTCAAAAGGAAG BM134465Ld06P003D06P003D121F1_02 ---------TGCGGAGCTTATTGTTTGG-TTAATACTGCAAACTCTTTCTCAAAAGGAAG BM134465Ld03P003D06P003D121F1_00 -------AATGCGGAGCTTATTGTTTGG-TTAATACTGCAAACTCTTTCTCAAAAGGAAG BM134465Ld10P003D06P003D121F1_02 ---------TGCGGAGCTTATTGTTTGG-TTAATACTGCAAACTCTTTCTCAAAAGGAAG BM134465Ld11P003D06P003D121F1_01 ---------TGCGGAGCTTATTGTTTGG-TTAATACTGCAAACTCTTTCTCAAAAGGAAG BM134465Ld12P003D06P003D121F1_01 -------AATGCGGAGCTTATTGTTTGG-TTAATACTGCAAACTCTTTCTCAAAAGGAAG BM134465Ld05P003D06P003D121F1_03 ---------TGCGGAGCTTATTGTTTGGTTTAATACTGCAAACTCTTTCTCAAAAGGAAG BM134465Ld07P003D06P003D121F1_02 ---------TGCGGAGCTTATTGTTTGG-TTAATACTGCAAACTCTTTCTCAAAAGGAAG BM134465Ld08P003D06P003D121F1_02 ---------TGCGGAGCTTATTGTTTGG-TTAATACTGCAAACTCTTTCTCAAAAGGAAG BM134465At01P003D06P003D121F1_07 -------AATGCCGAGCTTATTGTTTGG-TTAATACTGCAAACTCTTTCTCGAAAGGAAG BM134465At02P003D06P003D121F1_07 ---------TGCCGAGCTTATTGTTTGGTTTAATACTGCAAACTCTTTCTCGAAAGGAAG BM134465Tu01P003D06P003D121F1_05 -------AATGCC-AGCTTATTGTTTGG-TTAATACTGCAAACTCTTTCTCGAAAGGAAG BM134465Tu02P003D06P003D121F1_05 --------------AGCTTATTGTTTGG-TTAATACTGCAAACTCTTTCTCGAAAGGAAG BM134465As02P003D06P003D121F1_07 ---------TGCCGAGCTTATTGTTTGG-TTAATACTGCAAACTCTTTCTCGAAAGGAAG BM134465As01P003D06P003D121F1_05 --------ATGCCGAGCTTATTGTTTGG-TTAATACTGCAAACTCTTTCTCGAAAGGAAG ************* ********************** ******** BM134465Ld04P003D06P003D121F1_00 CCGCATCTTCTGGTCCAACTGCATCAAAAAATCTTCACATCAGCTATGGCATTAACAAAG BM134465Ld02P003D06P003D121F1_00 CCGCATCTTCTGGTCCAACTGCATCAAAAAATCTTCACATCAGCTATGGCATTAACAAAG BM134465Ld09P003D06P003D121F1_02 CCGCATCTTCTGGTCCAACTGCATCAAAAAATCTTCACATCAGCTATGGCATTAACAAAG BM134465Ld06P003D06P003D121F1_02 CCGCATCTTCTGGTCCAACTGCATCAAAAAATCTTCACATCAGCTATGGCATTAACAAAG BM134465Ld03P003D06P003D121F1_00 CCGCATCTTCTGGTCCAACTGCATCAAAAAATCTTCACATCAGCTATGGCATTAACAAAG BM134465Ld10P003D06P003D121F1_02 CCGCATCTTCTGGTCCAACTGCATCAAAAAATCTTCACATCAGCTATGGCATTAACAAAG BM134465Ld11P003D06P003D121F1_01 CCGCATCTTCTGGTCCAACTGCATCAAAAAATCTTCACATCAGCTATGGCATTAACAAAG BM134465Ld12P003D06P003D121F1_01 CCGCATCTTCTGGTCCAACTGCATCAAAAAATCTTCACATCAGCTATGGCATTAACAAAG BM134465Ld05P003D06P003D121F1_03 CCGCATCTTCTGGTCCAACTGCATCAAAAAATCTTCACATCAGCTATGGCATTAACAAAG BM134465Ld07P003D06P003D121F1_02 CCGCATCTTCTGGTCCAACTGCATCAAAAAATCTTCACATCAGCTATGGCATTAACAAAG BM134465Ld08P003D06P003D121F1_02 CCGCATCTTCTGGTCCAACTGCATCAAAAAATCTTCACATCAGCTATGGCATTAACAAAG BM134465At01P003D06P003D121F1_07 CCGCATCTTCTGGTCCAACTGCATCAAAAAATCTTTACATCAACTATGGCACTAACAAAG BM134465At02P003D06P003D121F1_07 CCGCATCTTCTGGTCCAACTGCATCAAAAAATCTTTACATCAACTATGGCACTAACAAAG BM134465Tu01P003D06P003D121F1_05 CCGCATCTTCTGGTCCAACTGCATCAAAAAATCTTTACATCAACTATGGCATTAACAAAG BM134465Tu02P003D06P003D121F1_05 CCGCATCTTCTGGTCCAACTGCATCAAAAAATCTTTACATCAACTATGGCATTAACAAAG BM134465As02P003D06P003D121F1_07 CCGCATCTTCTGGTCCAACTGCATCAAAAAATCTTTACATCAACTATGGCATTAACAAAG BM134465As01P003D06P003D121F1_05 CCGCATCTTCTGGTCCAACTGCATCAAAAAATCTTTACATCAACTATGGCATTAACAAAG *********************************** ****** ******** ******** BM134465Ld04P003D06P003D121F1_00 GGAAAAGAAAAAAAAACAGCAATTGGGTTATTATATCTAACCTTATCAAGACACCGGGTT BM134465Ld02P003D06P003D121F1_00 GGAAAAGAAAAAAAAACAGCAATTGGGTTATTATATCTAACCTTATCAAGACACCGGGTT BM134465Ld09P003D06P003D121F1_02 GGAAAAGAAAAAAAAACAGCAATTGGGTTATTATATCTAACCTTATCAAGACACCGGGTT BM134465Ld06P003D06P003D121F1_02 GGAAAAGAAAAAAAAACAGCAATTGGGTTATTATATCTAACCTTATCAAGACACCGGGTT BM134465Ld03P003D06P003D121F1_00 GGAAAAGAAAAAAAAACAGCAATTGGGTTATTATATCTAACCTTATCAAGACACCGGGTT BM134465Ld10P003D06P003D121F1_02 GGAAAAGAAAAAAAAACAGCAATTGGGTTATTATATCTAACCTTATCAAGACACCGGGTT BM134465Ld11P003D06P003D121F1_01 GGAAAAGAAAAAAAAACAGCAATTGGGTTATTATATCTAACCTTATCAAGACACCGGGTT BM134465Ld12P003D06P003D121F1_01 GGAAAAGAAAAAAAAACAGCAATTGGGTTATTATATCTAACCTTATCAAGACACCGGGTT BM134465Ld05P003D06P003D121F1_03 GGAAAAGAAAAAAAAACAGCAATTGGGTTATTATATCTAACCTTATCAAGACACCGGGTT BM134465Ld07P003D06P003D121F1_02 GGAAAAGAAAAAAAAACAGCAATTGGGTTATTATATCTAACCTTATCAAGACACCGGGTT BM134465Ld08P003D06P003D121F1_02 GGAAAAGAAAAAAAAACAGCAATTGGGTTATTATATCTAACCTTATCAAGACACCGGGTT BM134465At01P003D06P003D121F1_07 GGAAAAG--AAAAAACCAGCAATTGGGTTATTATATCTAACCTTATCAAGACACCGGGTT BM134465At02P003D06P003D121F1_07 GGAAAAG--AAAAAACCAGCAATTGGGTTATTATATCTAACCTTATCAAGACACCGGGTT BM134465Tu01P003D06P003D121F1_05 GGAAAAG--AAAAAACCAGCAATTGGGTTATTATATCTAACCTTATCAAGACACCGGGTT BM134465Tu02P003D06P003D121F1_05 GGAAAAG--AAAAAACCAGCAATTGGGTTATTATATCTAACCTTATCAAGACACCGGGTT BM134465As02P003D06P003D121F1_07 GGAAAAG--AAAGAACCAGCAATTGGGTTATTATATCTAACCTTATCAAGACACCGGGTT BM134465As01P003D06P003D121F1_05 GGAAAAG--AAAGAACCAGCAATTGGGTTATTATATCTAACCTTATCAAGACACCGGGTT ******* *** ** ******************************************** BM134465Ld04P003D06P003D121F1_00 GCATCAAGTACATAGCAAAAGTAGGACAATTGCCTGTATAGATCTGCCTCTGTGTACTGT BM134465Ld02P003D06P003D121F1_00 GCATCAAGTACATAGCAAAAGTAGGACAATTGCCTGCATAGATCTGCCTCTGTGTACTGT BM134465Ld09P003D06P003D121F1_02 GCATCAAGTACATAGCAAAAGTAGGACAATTGCCTGTATAGATCTGCCTCTGTGTACTGT BM134465Ld06P003D06P003D121F1_02 GCATCAAGTACATAGCAAAAGTAGGACAATTGCCTGTATAGATCTGCCTCTGTGTACTGT BM134465Ld03P003D06P003D121F1_00 GCATCAAGTACATAGCAAAAGTAGGACAATTGCCTGTATAGATCTGCCTCTGTGTACTGT BM134465Ld10P003D06P003D121F1_02 GCATCAAGTACATAGCAAAAGTAGGACAATTGCCTGTATAGATCTGCCTCTGTGTACTGT BM134465Ld11P003D06P003D121F1_01 GCATCAAGTACATAGCAAAAGTAGGACAATTGCCTGTATAGATCTGCCTCTGTGTACTGT BM134465Ld12P003D06P003D121F1_01 GCATCAAGTACATAGCAAAAGTAGGACAATTGCCTGTATAGATCTGCCTCTGTGTACTGT BM134465Ld05P003D06P003D121F1_03 GCATCAAGTACATAGCAAAAGTAGGACAATTGCCTGTATAGATCTGCCTCTGTGTACTGT BM134465Ld07P003D06P003D121F1_02 GCATCAAGTACATAGCAAAAGTAGGACAATTGCCTGTATAGATCTGCCTCTGTGTACTGT BM134465Ld08P003D06P003D121F1_02 GCATCAAGTACATAGCAAAAGTAGGACAATTGCCTGTATAGATCTGCCTCTGTGTACTGT BM134465At01P003D06P003D121F1_07 GCATCAAGTACATAGCAAAAGTAGGACAATTGCCTGTATAGATCTGCCTCTGTGTACTGT BM134465At02P003D06P003D121F1_07 GCATCAAGTACATAGCAAAAGTAGGACAATTGCCTGTATAGATCTGCCTCTGTGTACTGT BM134465Tu01P003D06P003D121F1_05 GCATCAAGTACATAGCAAAAGTAGGACAATTGCCTGTATAGATCTGCCTCTGTGTACTGT BM134465Tu02P003D06P003D121F1_05 GCATCAAGTACATAGCAAAAGTAGGACAATTGCCTGTATAGATCTGCCTCTGTGTACTGT BM134465As02P003D06P003D121F1_07 GCATCAAGTACATAGCAAAAGTAGGACAATTGCCTGTATAGATCTGCCTCTGTGTACTGT BM134465As01P003D06P003D121F1_05 GCATCAAGTACATAGCAAAAGTAGGACAATTGCCTGTATAGATCTGCCTCTGTGTACTGT ************************************ *********************** BM134465Ld04P003D06P003D121F1_00 CAGCACACAGAATCAGTATTAGTAGCCATCAAATCAAAGAAAAAATAAGCACATTATAAA BM134465Ld02P003D06P003D121F1_00 CAGCACACAGAATCAGTATTAGTAGCCATCAAATCAAAGAAAAAATAAGCACATTATAAA BM134465Ld09P003D06P003D121F1_02 CAGCACACAGAATCAGTATTAGTAGCCATCAAATCAAAGAAAAAATAAGCACATTATAAA BM134465Ld06P003D06P003D121F1_02 CAGCACACAGAATCAGTATTAGTAGCCATCAAATCAAAGAAAAAATAAGCACATTATAAA BM134465Ld03P003D06P003D121F1_00 CAGCACACAGAATCAGTATTAGTAGCCATCAAATCAAAGAAAAAATAAGCACATTATAAA BM134465Ld10P003D06P003D121F1_02 CAGCACACAGAATCAGTATTAGTAGCCATCAAATCAAAGAAAAAATAAGCACATTATAAA BM134465Ld11P003D06P003D121F1_01 CAGCACACAGAATCAGTATTAGTAGCCATCAAATCAAAGAAAAAATAAGCACATTATAAA BM134465Ld12P003D06P003D121F1_01 CAGCACACAGAATCAGTATTAGTAGCCATCAAATCAAAGAAAAAATAAGCACATTATAAA BM134465Ld05P003D06P003D121F1_03 CAGCACACAGAATCAGTATTAGTAGCCATCAAATCAAAGAAAAAATAAGCACATTATAAA BM134465Ld07P003D06P003D121F1_02 CAGCACACAGAATCAGTATTAGTAGCCATCAAATCAAAGAAAAAATAAGCACATTATAAA BM134465Ld08P003D06P003D121F1_02 CAGCACACAGAATCAGTATTAGTAGCCATCAAATCAAAGAAAAAATAAGCACATTATAAA BM134465At01P003D06P003D121F1_07 CAGCACACAGAATCGGTATTAGTAGCCATCAAATCAAAGAACAAATAAGCAC-TCATAAA BM134465At02P003D06P003D121F1_07 CAGCACACAGAATCGGTATTAGTAGCCATCAAATCAAAGAACAAATAAGCAC-TCATAAA BM134465Tu01P003D06P003D121F1_05 CAGCACACAGAATCGGTATTAGTAGCCATCAAATCAAAGAACAAATAAGCACATTATAAA BM134465Tu02P003D06P003D121F1_05 CAGCACACAGAATCGGTATTAGTAGCCATCAAATCAAAGAACAAATAAGCACATTATAAA BM134465As02P003D06P003D121F1_07 CAGCACACAGAATCAGTATTAGTAGCCATCAAATCAAAGAACAAATAAGCACATTATAAA BM134465As01P003D06P003D121F1_05 CAGCACACAGAATCAGTATTAGTAGCCATCATATCAAAGAACAAATAAGCACATTATAAA ************** **************** ********* ********** * ***** BM134465Ld04P003D06P003D121F1_00 CTTAAGCCCGTATCAACAAACCTGTCTTACTAGACGGCCGTTGCATTGTGGATAGTTCGG BM134465Ld02P003D06P003D121F1_00 CTTAAGCCCGTATCAACAAACCTGTCTTACTAGACGGCCGTTGCATTGTGGATAGTTCGG BM134465Ld09P003D06P003D121F1_02 CTTAAGCCCGTATCAACAAACCTGTCTTACTAGACGGCCGTTGCATTGTGGATAGTTCGG BM134465Ld06P003D06P003D121F1_02 CTTAAGCCCGTATCAACAAACCTGTCTTACTAGACGGCCGTTGCATTGTGGATAGTTCGG BM134465Ld03P003D06P003D121F1_00 CTTAAGCCCGTATCAACAAACCTGTCTTACTAGACGGCCGTTGCATTGTGGATAGTTCGG BM134465Ld10P003D06P003D121F1_02 CTTAAGCCCGTATCAACAAACCTGTCTTACTAGACGGCCGTTGCATTGTGGATAGTTCGG BM134465Ld11P003D06P003D121F1_01 CTTAAGCCCGTATCAACAAACCTGTCTTACTAGACGGCCGTTGCATTGTGGATAGTTCGG BM134465Ld12P003D06P003D121F1_01 CTTAAGCCCGTATCAACAAACCTGTCTTACTAGACGGCCGTTGCATTGTGGATAGTTCGG BM134465Ld05P003D06P003D121F1_03 CTTAAGCCCGTATCAACAAACCTGTCTTACTAGACGGCCGTTGCATTGTGGATAGTTCGG BM134465Ld07P003D06P003D121F1_02 CTTAAGCCCGTATCAACAAACCTGTCTTACTAGACGGCCGTTGCATTGTGGATAGTTCGG BM134465Ld08P003D06P003D121F1_02 CTTAAGCCCGTATCAACAAACCTGTCTTACTAGACGGCCGTTGCATTGTGGATAGTTCGG BM134465At01P003D06P003D121F1_07 CTTAAGCCCGTATCAACAAACCTGTCTTACTAAACGGCCGTTGCATTGTGGATA------ BM134465At02P003D06P003D121F1_07 CTTAAGCCCGTATCAACAAACCTGTCTTACTAAACGGCCGTTGCATTGTGGATA------ BM134465Tu01P003D06P003D121F1_05 CTTAAGCCCGTATCAACAAACCTGTCTTACTAGACGGCCGTTGCATTGTGGATA------ BM134465Tu02P003D06P003D121F1_05 CTTAAGCCCGTATCAACAAACCTGTCTTACTAGACGGCCGTTGCATTGTGGATA------ BM134465As02P003D06P003D121F1_07 CTTAAGCCCGTATCAACAAACCTGTCTTACTAGACGGCCGTTGCATTGT----------- BM134465As01P003D06P003D121F1_05 CTTAAGCCCGTATCAACAAACCTGTCTTACTAGACGGCCGTTGCATTG------------ ******************************** *************** BM134465Ld04P003D06P003D121F1_00 GCAGAATCACTAGTGAATT--CGCGGCCGCC-TGCAGGTC--GACCATATGGGAGAGCTC BM134465Ld02P003D06P003D121F1_00 GCAGAATCACTAGTGAATT--CGCGGCCGCC-TGCAGGTC--GACCATATGGGAGAGCTC BM134465Ld09P003D06P003D121F1_02 GCAGAATCACTAGTGAATT--CGCGGCCGCC-TGCAGGTC--GACCATATGGGAGAGCTC BM134465Ld06P003D06P003D121F1_02 GCAGAATCACTAGTGAATT--CGCGGCCGCC-TGCAGGTC--GACCATATGGGAGAGCTC BM134465Ld03P003D06P003D121F1_00 GC--AATCACTAGTGAATT--CGCGGCCGCC-TGCAGGTC--GACCATATGGGAGAGCTC BM134465Ld10P003D06P003D121F1_02 GCAGAATCACTAGTGAATT--CGCGGCCGCC-TGCAGGTC--GACCATATGGGAGAGCTC BM134465Ld11P003D06P003D121F1_01 GCAGAATCACTAGTGAATT--CGCGGCCGCC-TGCAGGTC--GACCATATGGGAGAGCTC BM134465Ld12P003D06P003D121F1_01 GCAGAATCACTAGTGAATT--CGCGGCCGCC-TGCAGGTC--GACCATATGGGAGAGCTC BM134465Ld05P003D06P003D121F1_03 GCAGAATCACTAGTGAATT--CGCGGCCGCC-TGCAGGTC--GACCATATGGGAGAGCTC BM134465Ld07P003D06P003D121F1_02 GCAGAATC------GAATTCCCGCGGCCGCCATGGCGGCCGGGAGCATGCGACGTCGGGC BM134465Ld08P003D06P003D121F1_02 GCAGAATC------GAATTCCCGCGGCCGCCATGGCGGCCGGGAGCATGCGACGTCGGGC BM134465At01P003D06P003D121F1_07 ------------------------------------------------------------ BM134465At02P003D06P003D121F1_07 ------------------------------------------------------------ BM134465Tu01P003D06P003D121F1_05 ------------------------------------------------------------ BM134465Tu02P003D06P003D121F1_05 ------------------------------------------------------------ BM134465As02P003D06P003D121F1_07 ------------------------------------------------------------ BM134465As01P003D06P003D121F1_05 ------------------------------------------------------------ BM134465Ld04P003D06P003D121F1_00 CCAACGCGTTGGATGCATAGC--------------------------------------- BM134465Ld02P003D06P003D121F1_00 CCAACGCGTTGGATGCATAGCTTGAGTATTCTATAGTGTCACCTAAATAGCTTGGCGTAA BM134465Ld09P003D06P003D121F1_02 CCAACGCGTTGGATGCATAGCTTGAGTATTCTATAGTGTCACCTAAATAGCTGGGCGTAA BM134465Ld06P003D06P003D121F1_02 CCAACGCGTTGGATGCATAGCTTGAGTATTCTATAGTGTCACCTAAATAGCTGGGCGTAA BM134465Ld03P003D06P003D121F1_00 CCAACGCGTTGGATGCATAGCTTGAGTATTCTATAGTGTCACCTAAATAGCTTGGCGTAA BM134465Ld10P003D06P003D121F1_02 CCAACGCGTTGGATGCATAGCTTGAGTATTCTATAGTGTCACCTAAATAGCTTGGCGTAA BM134465Ld11P003D06P003D121F1_01 CCAACGCGTTGGATGCATAGCTTGAGTATTCTATAGTGTCACCTAAATAGCTTGGCGTAA BM134465Ld12P003D06P003D121F1_01 CCAACGCGTTGGATGCATAGCTTGAGTATTCTATAGTGTCACCTAAATAGCTTGGCGTAA BM134465Ld05P003D06P003D121F1_03 CCAACGCGTTGGATGCATAGC--------------------------------------- BM134465Ld07P003D06P003D121F1_02 CCAATTCGCCCTATAGTGAGTCGTATTACAATTCACT----------------------- BM134465Ld08P003D06P003D121F1_02 CCAATTCGCCCTATAGTGAGTCGTATTACAATTCACTGG--------------------- BM134465At01P003D06P003D121F1_07 ------------------------------------------------------------ BM134465At02P003D06P003D121F1_07 ------------------------------------------------------------ BM134465Tu01P003D06P003D121F1_05 ------------------------------------------------------------ BM134465Tu02P003D06P003D121F1_05 ------------------------------------------------------------ BM134465As02P003D06P003D121F1_07 ------------------------------------------------------------ BM134465As01P003D06P003D121F1_05 ------------------------------------------------------------ BM134465Ld04P003D06P003D121F1_00 ------- BM134465Ld02P003D06P003D121F1_00 TCATGG- BM134465Ld09P003D06P003D121F1_02 TCATGG- BM134465Ld06P003D06P003D121F1_02 TCATGG- BM134465Ld03P003D06P003D121F1_00 TCATGG- BM134465Ld10P003D06P003D121F1_02 TCATGG- BM134465Ld11P003D06P003D121F1_01 TCATGGT BM134465Ld12P003D06P003D121F1_01 TCAT--- BM134465Ld05P003D06P003D121F1_03 ------- BM134465Ld07P003D06P003D121F1_02 ------- BM134465Ld08P003D06P003D121F1_02 ------- BM134465At01P003D06P003D121F1_07 ------- BM134465At02P003D06P003D121F1_07 ------- BM134465Tu01P003D06P003D121F1_05 ------- BM134465Tu02P003D06P003D121F1_05 ------- BM134465As02P003D06P003D121F1_07 ------- BM134465As01P003D06P003D121F1_05 -------