MUSCLE (3.6) multiple sequence alignment BM134465Ld01P003D06P003D121R1_00 ---------------------TGTGCTTATTTTTTCTTTGATTTGACGGTTACTAATACT BM134465Ld04P003D06P003D121R1_00 ------GGGCTTAGTTTATAATGTGCTTATTTTTTCTTTGATTTGATGGCTACTAATACT BM134465Ld02P003D06P003D121R1_00 TGATACGGGCTTAGTTTATAATGTGCTTATTTTTTCTTTGATTTGATGGCTACTAATACT BM134465Ld03P003D06P003D121R1_00 TGATACGGGCTTAGTTTATAATGTGCTTATTTTTTCTTTGATTTGATGGCTACTAATACT BM134465Ld11P003D06P003D121R1_01 -----GGGCTTAAGTTTATAATGTGCTTATTTTTTCTTTGATTTGATGGCTACTAATACT BM134465Ld05P003D06P003D121R1_03 ---------------------TGTGCTTATTTTTTCTTTGATTTGATGGCTACTAATACT BM134465Ld06P003D06P003D121R1_02 ---------------------TGTGCTTATTTTTTCTTTGATTTGATGGCTACTAATACT BM134465Ld09P003D06P003D121R1_02 ---------------------TGTGCTTATTTTTTCTTTGATTTGATGGCTACTAATACT BM134465Ld12P003D06P003D121R1_01 -------------------AATGTGCTTATTTTTTCTTTGATTTGATGGCTACTAATACT BM134465Ld07P003D06P003D121R1_02 ---------------------TGTGCTTATTTTTTCTTTGATTTGATGGCTACTAATACT BM134465Ld08P003D06P003D121R1_02 ---------------------TGTGCTTATTTTTTCTTTGATTTGATGGCTACTAATACT BM134465As02P003D06P003D121R1_07 ---------------------TGTGCTTATTTGTTCTTTGATTTGATGGCTACTAATACT BM134465As01P003D06P003D121R1_05 ---------------------TGTGCTTATTTGTTCTTTGATTTGATGGCTACTAATACT BM134465At01P003D06P003D121R1_07 ---------------TTTATGAGTGCTTATTTGTTCTTTGATTTGATGGCTACTAATACC BM134465At02P003D06P003D121R1_07 --------------------GAGTGCTTATTTGTTCTTTGATTTGATGGCTACTAATACC BM134465Tu01P003D06P003D121R1_05 ---------------------TGTGCTTATTTGTTCTTTGATTTGATGGCTACTAATACC BM134465Tu02P003D06P003D121R1_05 ---------------------TGTGCTTATTTGTTCTTTGATTTGATGGCTACTAATACC ********** ************* ** ********* BM134465Ld01P003D06P003D121R1_00 GATTCTGTGTGCTGACAGTACACAGAGCCTGATCTATACAGGCAATTGTCCTACTTTTGC BM134465Ld04P003D06P003D121R1_00 GATTCTGTGTGCTGACAGTACACAGAGGCAGATCTATACAGGCAATTGTCCTACTTTTGC BM134465Ld02P003D06P003D121R1_00 GATTCTGTGTGCTGACAGTACACAGAGGCAGATCTATGCAGGCAATTGTCCTACTTTTGC BM134465Ld03P003D06P003D121R1_00 GATTCTGTGTGCTGACAGTACACAGAGGCAGATCTATACAGGCAATTGTCCTACTTTTGC BM134465Ld11P003D06P003D121R1_01 GATTCTGTGTGCTGACAGTACACAGAGGCAGATCTATACAGGCAATTGTCCTACTTTTGC BM134465Ld05P003D06P003D121R1_03 GATTCTGTGTGCTGACAGTACACAGAGGCAGATCTATACAGGCAATTGTCCTACTTTTGC BM134465Ld06P003D06P003D121R1_02 GATTCTGTGTGCTGACAGTACACAGAGGCAGATCTATACAGGCAATTGTCCTACTTTTGC BM134465Ld09P003D06P003D121R1_02 GATTCTGTGTGCTGACAGTACACAGAGGCAGATCTATACAGGCAATTGTCCTACTTTTGC BM134465Ld12P003D06P003D121R1_01 GATTCTGTGTGCTGACAGTACACAGAGGCAGATCTATACAGGCAATTGTCCTACTTTTGC BM134465Ld07P003D06P003D121R1_02 GATTCTGTGTGCTGACAGTACACAGAGGCAGATCTATACAGGCAATTGTCCTACTTTTGC BM134465Ld08P003D06P003D121R1_02 GATTCTGTGTGCTGACAGTACACAGAGGCAGATCTATACAGGCAATTGTCCTACTTTTGC BM134465As02P003D06P003D121R1_07 GATTCTGTGTGCTGACAGTACACAGAGGCAGATCTATACAGGCAATTGTCCTACTTTTGC BM134465As01P003D06P003D121R1_05 GATTCTGTGTGCTGACAGTACACAGAGGCAGATCTATACAGGCAATTGTCCTACTTTTGC BM134465At01P003D06P003D121R1_07 GATTCTGTGTGCTGACAGTACACAGAGGCAGATCTATACAGGCAATTGTCCTACTTTTGC BM134465At02P003D06P003D121R1_07 GATTCTGTGTGCTGACAGTACACAGAGGCAGATCTATACAGGCAATTGTCCTACTTTTGC BM134465Tu01P003D06P003D121R1_05 GATTCTGTGTGCTGACAGTACACAGAGGCAGATCTATACAGGCAATTGTCCTACTTTTGC BM134465Tu02P003D06P003D121R1_05 GATTCTGTGTGCTGACAGTACACAGAGGCAGATCTATACAGGCAATTGTCCTACTTTTGC *************************** * ******* ********************** BM134465Ld01P003D06P003D121R1_00 TATGTACTTGATGCAACCCGGTGTCTTGATAAGGTTAGATATAATAACCCAATTGCTGTT BM134465Ld04P003D06P003D121R1_00 TATGTACTTGATGCAACCCGGTGTCTTGATAAGGTTAGATATAATAACCCAATTGCTGTT BM134465Ld02P003D06P003D121R1_00 TATGTACTTGATGCAACCCGGTGTCTTGATAAGGTTAGATATAATAACCCAATTGCTGTT BM134465Ld03P003D06P003D121R1_00 TATGTACTTGATGCAACCCGGTGTCTTGATAAGGTTAGATATAATAACCCAATTGCTGTT BM134465Ld11P003D06P003D121R1_01 TATGTACTTGATGCAACCCGGTGTCTTGATAAGGTTAGATATAATAACCCAATTGCTGTT BM134465Ld05P003D06P003D121R1_03 TATGTACTTGATGCAACCCGGTGTCTTGATAAGGTTAGATATAATAACCCAATTGCTGTT BM134465Ld06P003D06P003D121R1_02 TATGTACTTGATGCAACCCGGTGTCTTGATAAGGTTAGATATAATAACCCAATTGCTGTT BM134465Ld09P003D06P003D121R1_02 TATGTACTTGATGCAACCCGGTGTCTTGATAAGGTTAGATATAATAACCCAATTGCTGTT BM134465Ld12P003D06P003D121R1_01 TATGTACTTGATGCAACCCGGTGTCTTGATAAGGTTAGATATAATAACCCAATTGCTGTT BM134465Ld07P003D06P003D121R1_02 TATGTACTTGATGCAACCCGGTGTCTTGATAAGGTTAGATATAATAACCCAATTGCTGTT BM134465Ld08P003D06P003D121R1_02 TATGTACTTGATGCAACCCGGTGTCTTGATAAGGTTAGATATAATAACCCAATTGCTGTT BM134465As02P003D06P003D121R1_07 TATGTACTTGATGCAACCCGGTGTCTTGATAAGGTTAGATATAATAACCCAATTGCTG-- BM134465As01P003D06P003D121R1_05 TATGTACTTGATGCAACCCGGTGTCTTGATAAGGTTAGATATAATAACCCAATTGCTG-- BM134465At01P003D06P003D121R1_07 TATGTACTTGATGCAACCCGGTGTCTTGATAAGGTTAGATATAATAACCCAATTGCTG-- BM134465At02P003D06P003D121R1_07 TATGTACTTGATGCAACCCGGTGTCTTGATAAGGTTAGATATAATAACCCAATTGCTG-- BM134465Tu01P003D06P003D121R1_05 TATGTACTTGATGCAACCCGGTGTCTTGATAAGGTTAGATATAATAACCCAATTGCTG-- BM134465Tu02P003D06P003D121R1_05 TATGTACTTGATGCAACCCGGTGTCTTGATAAGGTTAGATATAATAACCCAATTGCTG-- ********************************************************** BM134465Ld01P003D06P003D121R1_00 TTTTTTTCTTTTCCCTTTGTTAATGCCATAGCTGATGTGAAGATTTTTTGATGCAGTTGG BM134465Ld04P003D06P003D121R1_00 TTTTTTTCTTTTCCCTTTGTTAATGCCATAGCTGATGTGAAGATTTTTTGATGCAGTTGG BM134465Ld02P003D06P003D121R1_00 TTTTTTTCTTTTCCCTTTGTTAATGCCATAGCTGATGTGAAGATTTTTTGATGCAGTTGG BM134465Ld03P003D06P003D121R1_00 TTTTTTTCTTTTCCCTTTGTTAATGCCATAGCTGATGTGAAGATTTTTTGATGCAGTTGG BM134465Ld11P003D06P003D121R1_01 TTTTTTTCTTTTCCCTTTGTTAATGCCATAGCTGATGTGAAGATTTTTTGATGCAGTTGG BM134465Ld05P003D06P003D121R1_03 TTTTTTTCTTTTCCCTTTGTTAATGCCATAGCTGATGTGAAGATTTTTTGATGCAGTTGG BM134465Ld06P003D06P003D121R1_02 TTTTTTTCTTTTCCCTTTGTTAATGCCATAGCTGATGTGAAGATTTTTTGATGCAGTTGG BM134465Ld09P003D06P003D121R1_02 TTTTTTTCTTTTCCCTTTGTTAATGCCATAGCTGATGTGAAGATTTTTTGATGCAGTTGG BM134465Ld12P003D06P003D121R1_01 TTTTTTTCTTTTCCCTTTGTTAATGCCATAGCTGATGTGAAGATTTTTTGATGCAGTTGG BM134465Ld07P003D06P003D121R1_02 TTTTTTTCTTTTCCCTTTGTTAATGCCATAGCTGATGTGAAGATTTTTTGATGCAGTTGG BM134465Ld08P003D06P003D121R1_02 TTTTTTTCTTTTCCCTTTGTTAATGCCATAGCTGATGTGAAGATTTTTTGATGCAGTTGG BM134465As02P003D06P003D121R1_07 GTTCTTTCTTTTCCCTTTGTTAATGCCATAGTTGATGTAAAGATTTTTTGATGCATTTGG BM134465As01P003D06P003D121R1_05 GTTCTTTCTTTTCCCTTTGTTAATGCCATAGTTGATGTAAAGATTTTTTGATGCAGTTGG BM134465At01P003D06P003D121R1_07 GTTTTTTCTTTTCCCTTTGTTAGTGCCATAGTTGATGTAAAGATTTTTTGATGCAGTTGG BM134465At02P003D06P003D121R1_07 GTTTTTTCTTTTCCCTTTGTTAGTGCCATAGTTGATGTAAAGATTTTTTGATGCAGTTGG BM134465Tu01P003D06P003D121R1_05 GTTTTTTCTTTTCCCTTTGTTAATGCCATAGTTGATGTAAAGATTTTTTGATGCAGTTGG BM134465Tu02P003D06P003D121R1_05 GTTTTTTCTTTTCCCTTTGTTAATGCCATAGTTGATGTAAAGATTTTTTGATGCAGTTGG ** ****************** ******** ****** **************** **** BM134465Ld01P003D06P003D121R1_00 ACCAGAAGATGCGGCTTCCTTTTGAGAAAGAGTTTGCAGTATTAAACCAAACAATAAGCT BM134465Ld04P003D06P003D121R1_00 ACCAGAAGATGCGGCTTCCTTTTGAGAAAGAGTTTGCAGTATTAAACCAAACAATAAGCC BM134465Ld02P003D06P003D121R1_00 ACCAGAAGATGCGGCTTCCTTTTGAGAAAGAGTTTGCAGTATTAAACCAAACAATAAGCT BM134465Ld03P003D06P003D121R1_00 ACCAGAAGATGCGGCTTCCTTTTGAGAAAGAGTTTGCAGTATTAAACCAAACAATAAGCT BM134465Ld11P003D06P003D121R1_01 ACCAGAAGATGCGGCTTCCTTTTGAGAAAGAGTTTGCAGTATTAAACCAAACAATAAGCT BM134465Ld05P003D06P003D121R1_03 ACCAGAAGATGCGGCTTCCTTTTGAGAAAGAGTTTGCAGTATTAAACCAAACAATAAGCT BM134465Ld06P003D06P003D121R1_02 ACCAGAAGATGCGGCTTCCTTTTGAGAAAGAGTTTGCAGTATTAAACCAAACAATAAGCT BM134465Ld09P003D06P003D121R1_02 ACCAGAAGATGCGGCTTCCTTTTGAGAAAGAGTTTGCAGTATTAAACCAAACAATAAGCT BM134465Ld12P003D06P003D121R1_01 ACCAGAAGATGCGGCTTCCTTTTGAGAAAGAGTTTGCAGTATTAAACCAAACAATAAGCT BM134465Ld07P003D06P003D121R1_02 ACCAGAAGATGCGGCTTCCTTTTGAGAAAGAGTTTGCAGTATTAAACCAAACAATAAGCT BM134465Ld08P003D06P003D121R1_02 ACCAGAAGATGCGGCTTCCTTTTGAGAAAGAGTTTGCAGTATTAAACCAAACAATAAGCT BM134465As02P003D06P003D121R1_07 ACCAGAATATGCGGCTTCCTTTCGAGAAAGAGTTTGCAGTATTAAACCAAACAATAAGCT BM134465As01P003D06P003D121R1_05 ACCAGAAGATGCGGCTTCCTTTCGAGAAAGAGTTTGCAGTATTAAACCAAACAATAAGCT BM134465At01P003D06P003D121R1_07 ACCAGAAGATGCGGCTTCCTTTCGAGAAAGAGTTTGCAGTATTAAACCAAACAATAAGCT BM134465At02P003D06P003D121R1_07 ACCAGAAGATGCGGCTTCCTTTCGAGAAAGAGTTTGCAGTATTAAACCAAACAATAAGCT BM134465Tu01P003D06P003D121R1_05 ACCAGAAGATGCGGCTTCCTTTCGAGAAAGAGTTTGCAGTATTAAACCAAACAATAAGCT BM134465Tu02P003D06P003D121R1_05 ACCAGAAGATGCGGCTTCCTTTCGAGAAAGAGTTTGCAGTATTAAACCAAACAATAAGCT ******* ************** ************************************ BM134465Ld01P003D06P003D121R1_00 CCGCATTTCTGGAGATTCAGAAAATCCGAGACAGATGTGCTTTCGGATGGGTTCAATTGA BM134465Ld04P003D06P003D121R1_00 CCGCATTTCTGGAGATTCAGAAAATCCGAGACAGATGTGCTTTCGGATGGGTTCAATTGA BM134465Ld02P003D06P003D121R1_00 CCGCATTTCTGGAGATTCAGAAAATCCGAGACAGATGTGCTTTCGGATGGGTTCAATTGA BM134465Ld03P003D06P003D121R1_00 CCGCATTTCTGGAGATTCAGAAAATCCGAGACAGATGTGCTTTCGGATGGGTTCAATTGA BM134465Ld11P003D06P003D121R1_01 CCGCATTTCTGGAGATTCAGAAAATCCGAGACAGATGTGCTTTCGGATGGGTTCAATTGA BM134465Ld05P003D06P003D121R1_03 CCGCATTTCTGGAGATTCAGAAAATCCGAGACAGATGTGCTTTCGGATGGGTTCAATTGA BM134465Ld06P003D06P003D121R1_02 CCGCATTTCTGGAGATTCAGAAAATCCGAGACAGATGTGCTTTCGGATGGGTTCAATTGA BM134465Ld09P003D06P003D121R1_02 CCGCATTTCTGGAGATTCAGAAAATCCGAGACAGATGTGCTTTCGGATGGGTTCAATTGA BM134465Ld12P003D06P003D121R1_01 CCGCATTTCTGGAGATTCAGAAAATCCGAGACAGATGTGCTTTCGGATGGGTTCAATTGA BM134465Ld07P003D06P003D121R1_02 CCGCATTTCTGGAGATTCAGAAAATCCGAGACAGATGTGCTTTCGGATGGGTTCAATTGA BM134465Ld08P003D06P003D121R1_02 CCGCATTTCTGGAGATTCAGAAAATCCGAGACAGATGTGCTTTCGGATGGGTTCAATTGA BM134465As02P003D06P003D121R1_07 CGGCATTTCTGGAGATTCAGAAAATCCGAGACAGATGTGCTTTCAGATGG---------- BM134465As01P003D06P003D121R1_05 CGGCATTTCTGGAGATTCAGAAAATCCGAGACAGATGTGCTTTCAGATGGGTTCAAGTG- BM134465At01P003D06P003D121R1_07 CGGCATTTCTGGAGATTCAGAGAATCCGAGACAGATGTGCTTTCGGATGGGTTCAATT-- BM134465At02P003D06P003D121R1_07 CGGCATTTCTGGAGATTCAGAGAATCCGAGACAGATGTGCTTTCGGATGGGTTCAATT-- BM134465Tu01P003D06P003D121R1_05 TGGCATTTCTGGAGATTCAGAAAATCCGAGACAGATGTGCTTTCGGATGGTTTCAATT-- BM134465Tu02P003D06P003D121R1_05 TGGCATTTCTGGAGATTCAGAAAATCCGAGACAGATGTGCTTTCGGATGGTTTCAATT-- ******************* ********************** ***** BM134465Ld01P003D06P003D121R1_00 ATC------GAATTCCCGCGGCCGCCATGGCGGCCGGGAGCATGCGACGTCGGGCCCAAT BM134465Ld04P003D06P003D121R1_00 ATC------GAATTCCCGCGGCCGCCATGGCGGCCGGGAGCATGCGACGTCGGGCCCAAT BM134465Ld02P003D06P003D121R1_00 ATC------GAATTCCCGCGGCCGCCATGGCGGCCGGGAGCATGCGACGTCGGGCCCAAT BM134465Ld03P003D06P003D121R1_00 ATC------GAATTCCCGCGGCCGCCATGGCGGCCGGGAGCATGCGACGTCGGGCCCAAT BM134465Ld11P003D06P003D121R1_01 ATC------GAATTCCCGCGGCCGCCATGGCGGCCGGGAGCATGCGACGTCGGGCCCAAT BM134465Ld05P003D06P003D121R1_03 ATC------GAATTCCCGCGGCCGCCATGGCGGCCGGGAGCATGCGACGTCGGGCCCAAT BM134465Ld06P003D06P003D121R1_02 ATC------GAATTCCCGCGGCCGCCATGGCGGCCGGGAGCATGCGACGTCGGGCCCAAT BM134465Ld09P003D06P003D121R1_02 ATC------GAATTCCCGCGGCCGCCATGGCGGCCGGGAGCATGCGACGTCGGGCCCAAT BM134465Ld12P003D06P003D121R1_01 ATC------GAATTCCCGCGGCCGCCATGGCGGCCGGGAGCATGCGACGTCGGGCCCAAT BM134465Ld07P003D06P003D121R1_02 ATCACTAGTGAATT--CGCGGCCGCC-TGCAGGTC--GACCATATGGGAGAGCTCCCAAC BM134465Ld08P003D06P003D121R1_02 ATCACTAGTGAATT--CGCGGCCGCC-TGCAGGTC--GACCATATGGGAGAGCTCCCAAC BM134465As02P003D06P003D121R1_07 ------------------------------------------------------------ BM134465As01P003D06P003D121R1_05 ------------------------------------------------------------ BM134465At01P003D06P003D121R1_07 ------------------------------------------------------------ BM134465At02P003D06P003D121R1_07 ------------------------------------------------------------ BM134465Tu01P003D06P003D121R1_05 ------------------------------------------------------------ BM134465Tu02P003D06P003D121R1_05 ------------------------------------------------------------ BM134465Ld01P003D06P003D121R1_00 TCGCCCTATAGTGAGTCGTATTACAATTCACTGGCC------------------------ BM134465Ld04P003D06P003D121R1_00 TCGCCCTATAGTGAGTCGTATTACAATTCACTGGCC------------------------ BM134465Ld02P003D06P003D121R1_00 TCGCCCTATAGTGAGTCGTATTACAATTCACTGGCC------------------------ BM134465Ld03P003D06P003D121R1_00 TCGCCCTATAGTGAGTCGTATTACAATTCACTG--------------------------- BM134465Ld11P003D06P003D121R1_01 TCGCCCTATAGTGAGTCGTATTACAATTCACTG--------------------------- BM134465Ld05P003D06P003D121R1_03 TCGCCCTATAGTGAGTCGTATTACAATTCACTG--------------------------- BM134465Ld06P003D06P003D121R1_02 TCGCCCTATAGTGAGTCGTATTACAATTCACTGG-------------------------- BM134465Ld09P003D06P003D121R1_02 TCGCCCTATAGTGAGTCGTATTACAATTCACT---------------------------- BM134465Ld12P003D06P003D121R1_01 TCGCCCTATAGTGAGTCGTATTACAATTCACTGG-------------------------- BM134465Ld07P003D06P003D121R1_02 GCGTTGGATGCATAGCTTGAGTATTCTATAGTGTCACCTAAATAGCTGGGCGTAATCATG BM134465Ld08P003D06P003D121R1_02 GCGTTGGATGCATAGCTTGAGTATTCTATAGTGTCACCTAAATAGCTTGGCGTAATCATG BM134465As02P003D06P003D121R1_07 ------------------------------------------------------------ BM134465As01P003D06P003D121R1_05 ------------------------------------------------------------ BM134465At01P003D06P003D121R1_07 ------------------------------------------------------------ BM134465At02P003D06P003D121R1_07 ------------------------------------------------------------ BM134465Tu01P003D06P003D121R1_05 ------------------------------------------------------------ BM134465Tu02P003D06P003D121R1_05 ------------------------------------------------------------ BM134465Ld01P003D06P003D121R1_00 - BM134465Ld04P003D06P003D121R1_00 - BM134465Ld02P003D06P003D121R1_00 - BM134465Ld03P003D06P003D121R1_00 - BM134465Ld11P003D06P003D121R1_01 - BM134465Ld05P003D06P003D121R1_03 - BM134465Ld06P003D06P003D121R1_02 - BM134465Ld09P003D06P003D121R1_02 - BM134465Ld12P003D06P003D121R1_01 - BM134465Ld07P003D06P003D121R1_02 G BM134465Ld08P003D06P003D121R1_02 G BM134465As02P003D06P003D121R1_07 - BM134465As01P003D06P003D121R1_05 - BM134465At01P003D06P003D121R1_07 - BM134465At02P003D06P003D121R1_07 - BM134465Tu01P003D06P003D121R1_05 - BM134465Tu02P003D06P003D121R1_05 -