MUSCLE (3.6) multiple sequence alignment BM138225Ld06P003F01F07C1 ------------------------------------------------------------ BM138225Ld05P003F01F07C1 ------------------------------------------------------------ BM138225Ld07P003F01F07C1 ------------------------------------------------------------ BM138225As01P003F01F07C1 ------------------------------------------------------------ BM138225Ld02P003F01F07C1 -----------AATTGTAATACGACTCACTATAGGGC------GAATTGGGCCCGACG-- BM138225At01P003F01F07C1 ------------------------------------------------------------ BM138225At02P003F01F07C1 ------------------------------------------------------------ BM138225Ld08P003F01F07C1 -----------AATTGTAATACGACTCACTATAGGGC------GAATTGGGCCCGACG-- BM138225Ld01P003F01F07C1 -----------AATTGTAATACGACTCACTATAGGGC------GAATTGGGCCCGACG-- BM138225Ld04P003F01F07C1 ---ATTACGCCAAGCTATTTAGGTGACACTATAGAATACTCAAGCTATGCATCCAACGCG BM138225Ld09P003F01F07C1 -TGATTACGCCAAGCTATTTAGGTGACACTATAGAATACTCAAGCTATGCATCCAACGCG BM138225Ld10P003F01F07C1 ATGATTACGCCAAGCTATTTAGGTGACACTATAGAATACTCAAGCTATGCATCCAACGCG BM138225Tu01P003F01F07C1 ------------------------------------------------------------ BM138225Ld06P003F01F07C1 ------------------------------------------------------------ BM138225Ld05P003F01F07C1 ------------------------------------------------------------ BM138225Ld07P003F01F07C1 ------------------------------------------------------------ BM138225As01P003F01F07C1 ------------------------------------------------------------ BM138225Ld02P003F01F07C1 ----------TCGCATGCTCCCGGCCGCCATGGCGGCCGCGGGAATTC------GATTGT BM138225At01P003F01F07C1 ------------------------------------------------------------ BM138225At02P003F01F07C1 ------------------------------------------------------------ BM138225Ld08P003F01F07C1 ----------TCGCATGCTCCCGGCCGCCATGGCGGCCGCGGGAATTC------GATTGT BM138225Ld01P003F01F07C1 ----------TCGCATGCTCCCGGCCGCCATGGCGGCCGCGGGAATTC------GATTGT BM138225Ld04P003F01F07C1 TTGGGAGCTCTCCCATATGGTCGACCTGCA-GGCGGCCGC--GAATTCACTAGTGATTGT BM138225Ld09P003F01F07C1 TTGGGAGCTCTCCCATATGGTCGACCTGCA-GGCGGCCGC--GAATTCACTAGTGATTGT BM138225Ld10P003F01F07C1 TTGGGAGCTCTCCCATATGGTCGACCTGCA-GGCGGCCGC--GAATTCACTAGTGATTGT BM138225Tu01P003F01F07C1 ------------------------------------------------------------ BM138225Ld06P003F01F07C1 -------------------------GTGAATTGTAATACGACTCAC-TATAGG------- BM138225Ld05P003F01F07C1 -------------ATGATTACGCCA---AGCTATT--------------TAGGTGACACT BM138225Ld07P003F01F07C1 -----------CCATGATTACGCCA---AGCTATT--------------TAGGTGACACT BM138225As01P003F01F07C1 -------------CAAGTGACACAAGAGAGCTATTTTATAGTTTTCATATAGATGATGTG BM138225Ld02P003F01F07C1 GGGAATTGGACAGCAAGTGACACAAGAGAGCTATTTTATAGTTTTCATATAGATGATGTG BM138225At01P003F01F07C1 --------------AAGTGACACAAGAGAGCTATTTTATAGTTTTCATATAGATGATGTG BM138225At02P003F01F07C1 -----------AGCAAGTGACACAAGAGAGCTATTTTATAGTTTTCATATAGATGATGTG BM138225Ld08P003F01F07C1 GGGAATTGGACAGCAAGTGACACAAGAGAGCTATTTTATAGTTTTCGTATAGATGATGTG BM138225Ld01P003F01F07C1 GGGAATTGGACAGCAAGTGACACAAGAGAGCTATTTTATAGTTTTCATATAGATGATGTG BM138225Ld04P003F01F07C1 GGGAATTGGACAGCAAGTGACACAAGAGAGCTATTTTATAGTTTTCATATAGATGATGTG BM138225Ld09P003F01F07C1 GGGAATTGGACAGCAAGTGACACAAGAGAGCTATTTTATAGTTTTCATATAGATGATGTG BM138225Ld10P003F01F07C1 GGGAATTGGACAGCAAGTGACACAAGAGAGCTATTTTATAGTTTTCATATAGATGATGTG BM138225Tu01P003F01F07C1 ---------------AGTGACACAAGAGAGCTATTTTATAGTTTTCATATAGATGATGTG * * * *** BM138225Ld06P003F01F07C1 ---GCG------AATTGGGCC-CGA---------CGTC--------------------GC BM138225Ld05P003F01F07C1 ATAGAATACTCAAGCTATGCATCCAACGCGTTGGGAGCTCTCCCATAT---------GGT BM138225Ld07P003F01F07C1 ATAGAATACTCAAGCTATGCATCCAACGCGTTGGGAGCTCTCCCATAT---------GGT BM138225As01P003F01F07C1 CCAGCAGAGTC-AGTTATGCA-CAAATGTGT---GGTCCATTTCATTCCACTGAACAAGC BM138225Ld02P003F01F07C1 CCAGCGGAGTC-AGTTGTGCA-CAAATGTGT---GGTACATTTCATTCCACTGAACAAGC BM138225At01P003F01F07C1 CCAGCGGAGTC-AGTTATGCA-CAAATGTGT---AGTCCATTTCATTCCACTGAACAAGC BM138225At02P003F01F07C1 CCAGCGGAGTC-AGTTATGCA-CAAATGTGT---AGTCCATTTCATTCCACTGAACAAGC BM138225Ld08P003F01F07C1 CCAGCGGAGTC-AGTTATGCA-CAAATGTGT---GGTCCATTTCATTCCACTGAACAAGC BM138225Ld01P003F01F07C1 CCAGCGGAGTC-AGTTATGCA-CAAATGTGT---GGTCCATTTCATTCCACTGAACAAGC BM138225Ld04P003F01F07C1 CCAGCGGAGTC-AGTTATGCA-CAAATGTGT---GGTCCATTTCATTCCACTGAACAAGC BM138225Ld09P003F01F07C1 CCAGCGGAGTC-AGTTATGCA-CAAATGTGT---GGTCCATTTCATTCCACTGAACAAGC BM138225Ld10P003F01F07C1 CCAGCGGAGTC-AGTTATGCA-CAAATGTGT---GGTCCATTTCATTCCACTGAACAAGC BM138225Tu01P003F01F07C1 CCAGCGGAGTC-AGTTATGCA-CAAATGTGT---GGTCCATTTCATTCCACTGAACAAGC * * * ** * * * BM138225Ld06P003F01F07C1 ATGCTCCCGGCCG---------CCATGG--------------------------CGGCCG BM138225Ld05P003F01F07C1 CGACCTGCAGGCGG--------CCGCGAATTCACT------------------------- BM138225Ld07P003F01F07C1 CGACCTGCAGGCGG--------CCGCGAATTCACT------------------------- BM138225As01P003F01F07C1 AGATTCCCAGTCGAAAGGAACACCCTGGGTTCATTGTCCAAAAAGTTTACGACACAGTTG BM138225Ld02P003F01F07C1 AGATTCCCAGTCGAAAGGAACACCCTGGGTTCATTGTCCAAAAAGTTTACGACACAGTTG BM138225At01P003F01F07C1 AGATTCCCAGTCGAAAGGAACACCCTGGATTCATTGTCCAAAAAGTTTACGACACAGTTG BM138225At02P003F01F07C1 AGATTCCCAGTCGAAAGGAACACCCTGGATTCATTGTCCAAAAAGTTTACGACACAGTTG BM138225Ld08P003F01F07C1 AGATTCCCAGTCGAAAGGAACACCCTGGATTCATTGTCCAAAAAGTTTACGACACAGTTG BM138225Ld01P003F01F07C1 AGATTCCCAGTCGAAAGGAACACCCTGGATTCATTGTCCAAAAAGTTTACGACACAGTTG BM138225Ld04P003F01F07C1 AGATTCCCAGTCGAAAGGAACACCCTGGATTCATTGTCCAAAAAGTTTACGACACAGTTG BM138225Ld09P003F01F07C1 AGATTCCCAGTCGAAAGGAACACCCTGGATTCATTGTCCAAAAAGTTTACGACACAGTTG BM138225Ld10P003F01F07C1 AGATTCCCAGTCGAAAGGAACACCCTGGATTCATTGTCCAAAAAGTTTACGACACAGTTG BM138225Tu01P003F01F07C1 AGATTCCCAGTCGAAAGGAACACCCTGGATTCATTGTCCAAAAAGTTTACGACACAGTTG * * ** ** * BM138225Ld06P003F01F07C1 CGGGAATTCGATTGTGGGAATT------------------GGACAGCAAGTCCA---GCG BM138225Ld05P003F01F07C1 ---AGT---GATTGTGGGAATT------------------GGACAGCAAGTAGCTGGAGG BM138225Ld07P003F01F07C1 ---AGT---GATTGTGGGAATT------------------GGACAGCAAGTAGCTGGAGG BM138225As01P003F01F07C1 CGAAGA---AATTGTGGAACTTAACAGATAAGGATTATGAGGATAACAAGCAAC---ACG BM138225Ld02P003F01F07C1 CGAAGA---AATTGTGGAACTTAACAGATAAGGATTATGAGGATAACAAGCAAC---ACG BM138225At01P003F01F07C1 CGAAGA---AATTGTGGAACTTAACAGATAAGGATTATGAGGATAACAAGCAAC---ACG BM138225At02P003F01F07C1 CGAAGA---AATTGTGGAACTTAACAGATAAGGATTATGAGGATAACAAGCAAC---ACG BM138225Ld08P003F01F07C1 CGAAGA---AATTGTGGAACTTAACAGATAAGGATTATGAGGATAACAAGCAAC---ACG BM138225Ld01P003F01F07C1 CGAAGA---AATTGTGGAACTTAACAGATAAGGATTATGAGGATAACAAGCAAC---ACG BM138225Ld04P003F01F07C1 CGAAGA---AATTGTGGAACTTAACAGATAAGGATTATGAGGATAACAAGCAAC---ACG BM138225Ld09P003F01F07C1 CGAAGA---AATTGTGGAACTTAACAGATAAGGATTATGAGGATAACAAGCAAC---ACG BM138225Ld10P003F01F07C1 CGAAGA---AATTGTGGAACTTAACAGATAAGGATTATGAGGATAACAAGCAAC---ACG BM138225Tu01P003F01F07C1 CGAAGA---AATTGTGGAACTTAACAGATAAGGATTATGAGGATAACAAGCAAC---ACG ******* * ** *** * **** * BM138225Ld06P003F01F07C1 GAGTTCCTCGCCTCGT--CTCCGTCAATATTCTGTGTTCCCG--GCCGCATCCTCATGTC BM138225Ld05P003F01F07C1 ACGACGACGTCCCAATGAAGAACATGGTAGTCGACGATCCGGCACCAACCCCCT------ BM138225Ld07P003F01F07C1 ACGACGACGTCCCAATGAAGAACATGGTAGTCGACGATCCGGCACCAACCCCCT------ BM138225As01P003F01F07C1 AAATCAATCTCCTCGTGAAGAAAACAGTGGACCGTATC--GG--ACAGCTTCCTGACCGT BM138225Ld02P003F01F07C1 AAATCGATCTCCTCGTGAAGAAAACAGTGGACCGTATT--GG--ACAGCTTCCTGACCGT BM138225At01P003F01F07C1 AAATCGATCTCCTCGTGAAGAAAACAGTGGACCGTATT--GG--ACAGCTTCCTGACCGT BM138225At02P003F01F07C1 AAATCGATCTCCTCGTGAAGAAAACAGTGGACCGTATT--GG--ACAGCTTCCTGACCGT BM138225Ld08P003F01F07C1 AAATCGATCTCCTCGTGAAGAAAACAGTGGACCATATT--GG--ACAGCTTCCTGACCGT BM138225Ld01P003F01F07C1 AAATCGATCTCCTCGTGAAGAAAACAGTGGACCGTATT--GG--ACAGCTTCCTGACCGT BM138225Ld04P003F01F07C1 AAATCGATCTCCTCGTGAAGAAAACAGTGGACCGTATT--GG--ACAGCTTCCTGACCGT BM138225Ld09P003F01F07C1 AAATCGATCTCCTCGTGAAGAAAACAGTGGACCGTATT--GG--ACAGCTTCCTGACCGT BM138225Ld10P003F01F07C1 AAATCGATCTCCTCGTGAAGAAAACAGTGGACCGTATT--GG--ACAGCTTCCTGACCGT BM138225Tu01P003F01F07C1 AAATCGATCTCCTCGTGAAGAAAACAGTGGACCGTATT--GG--ACAGCTTCCTGACCGT ** * * * * * * *** BM138225Ld06P003F01F07C1 ACAGGTATACTAGGTATACCCAACTCCAACCCTGATCTTTTCAATCGCGATTAGACCGTG BM138225Ld05P003F01F07C1 ------------------CCTCCGCGCCATCCTCGCCAAATA------------------ BM138225Ld07P003F01F07C1 ------------------CCTCCGCGCCATCCTCGCCAAATA------------------ BM138225As01P003F01F07C1 GAACCTA---TAGATGTACCTGCTGACAGTACTGATCAGTTC------------------ BM138225Ld02P003F01F07C1 GAACCTA---TAGATGTACCTGCTGACAGTACTGATCAGTTC------------------ BM138225At01P003F01F07C1 GAACCTA---TAGATGTACCTGCTGACAGTACTGATCAGTTC------------------ BM138225At02P003F01F07C1 GAACCTA---TAGATGTACCTGCTGACAGTACTGATCAGTTC------------------ BM138225Ld08P003F01F07C1 GAACCTA---TAGATGTACCTGCTGACAGTACTGATCAGTTC------------------ BM138225Ld01P003F01F07C1 GAACCTA---TAGATGTACCTGCTGACAGTACTGATCAGTTC------------------ BM138225Ld04P003F01F07C1 GAACCTA---TAGATGTACCTGCTGACAGTACTGATCAGTTC------------------ BM138225Ld09P003F01F07C1 GAACCTA---TAGATGTACCTGCTGACAGTACTGATCAGTTC------------------ BM138225Ld10P003F01F07C1 GAACCTA---TAGATGTACCTGCTGACAGTACTGATCAGTTC------------------ BM138225Tu01P003F01F07C1 GAACCTA---TAGATGTACCTGCTGACAGTACTGATCAGTTC------------------ ** * ** * * BM138225Ld06P003F01F07C1 GAGTCGTCCCTAGATCCATGCCATCCTCGCCAAATATAAAATCACTAGTGAATTCGCGGC BM138225Ld05P003F01F07C1 -----------------------------TAAATCGAATTCCCGC--------------- BM138225Ld07P003F01F07C1 -----------------------------TAAATCGAATTCCCGC--------------- BM138225As01P003F01F07C1 -----------------------------TCAAATAAA----CGC--------------- BM138225Ld02P003F01F07C1 -----------------------------TCAAATAAA----CGC--------------- BM138225At01P003F01F07C1 -----------------------------TCAAATAAA----CGC--------------- BM138225At02P003F01F07C1 -----------------------------TCAAATAAA----CGC--------------- BM138225Ld08P003F01F07C1 -----------------------------TCAAATAAA----CGC--------------- BM138225Ld01P003F01F07C1 -----------------------------TCAAATAAA----CGC--------------- BM138225Ld04P003F01F07C1 -----------------------------TCAAATAAA----CGC--------------- BM138225Ld09P003F01F07C1 -----------------------------TCAAATAAA----CGC--------------- BM138225Ld10P003F01F07C1 -----------------------------TCAAATAAA----CGC--------------- BM138225Tu01P003F01F07C1 -----------------------------TCAAATAAA----CGC--------------- ** * * * BM138225Ld06P003F01F07C1 CGCCTGCAGGTCGAC----------CATATGGGAGAGCTCCCAACGCGTTGGATGCAT-- BM138225Ld05P003F01F07C1 --------GGCCGCCATGGCGGCCGGGAGCATGCGACGTCGGGCCCAATTCGCCCTATAG BM138225Ld07P003F01F07C1 --------GGCCGCCATGGCGGCCGGGAGCATGCGACGTCGGGCCCAATTCGCCCTATAG BM138225As01P003F01F07C1 --------GGTCTAC-------------GAAAGAGACCTCCAAACCCTTTAGATGTGTCG BM138225Ld02P003F01F07C1 --------GGTCTAC-------------GAAAGAGACCTCCAAACCCTTTAGACGTGTCG BM138225At01P003F01F07C1 --------GGTCTAC-------------GAAAGAGACCTCCGAACCCTTTAGACGTGTCG BM138225At02P003F01F07C1 --------GGTCTAC-------------GAAAGAGACCTCCGAACCCTTTAGACGTGTCG BM138225Ld08P003F01F07C1 --------GGTCTAC-------------GAAAGAGACCTCCGAACCCTTTAGACGTGTCG BM138225Ld01P003F01F07C1 --------GGTCTAC-------------GAAAGAGACCTCCGAACCCTTTAGACGTGTCG BM138225Ld04P003F01F07C1 --------GGTCTAC-------------GAAAGAGACCTCCGAACCCTTTAGACGTGTCG BM138225Ld09P003F01F07C1 --------GGTCTAC-------------GAAAGAGACCTCCGAACCCTTTAGACGTGTCG BM138225Ld10P003F01F07C1 --------GGTCTAC-------------GAAAGAGACCTCCGAACCCTTTAGACGTGTCG BM138225Tu01P003F01F07C1 --------GGTCTAC-------------GAAAGAGACCTCCGAACCCTTTAGACGTGTCG ** * * * ** ** * ** * * BM138225Ld06P003F01F07C1 ----------------AGCTTGAGTATTCTATAGTGTCACCTAAATAGCTTGGCGTAATC BM138225Ld05P003F01F07C1 TGAGTCGTATTA------------CAATTCACT--------------------------- BM138225Ld07P003F01F07C1 TGAGTCGTATTA------------CAATTCA-----------------CTGGCGGT---- BM138225As01P003F01F07C1 AGAGATACAACAGGCAAACCCGAGCAATTCATAAAAGCA--GAGACACCTGGGAGTGATA BM138225Ld02P003F01F07C1 AGAGATACAACAGGCAAACCCGAGCAATTCATAAAAGCA--GAGACACCTGGGAGTGATA BM138225At01P003F01F07C1 AGAGATACAACAGGCAAACCCGAGCAATTCATAAAAGCA--GAGACACCCGGGAGTGATA BM138225At02P003F01F07C1 AGAGATACAACAGGCAAACCCGAGCAATTCATAAAAGCA--GAGACACCCGGGAGTGATA BM138225Ld08P003F01F07C1 AAAGATACAACAGGCAAACCCGAGCAACTCATAAAAGCA--GAGACACCTGGGAGTGATA BM138225Ld01P003F01F07C1 AAAGATACAACAGGCAAACCCGAGCAATTCATAAAAGCA--GAGACACCTGGGAGTGATA BM138225Ld04P003F01F07C1 AAAGATACAACAGGCAAACCCGAGCAATTCATAAAAGCA--GAGACACCTGGGAGTGATA BM138225Ld09P003F01F07C1 AAAGATACAACAGGCAAACCCGAGCAATTCATAAAAGCA--GAGACACCTGGGAGTGATA BM138225Ld10P003F01F07C1 AAAGATACAACAGGCAAACCCGAGCAATTCATAAAAGCA--GAGACACCTGGGAGTGATA BM138225Tu01P003F01F07C1 AGAGATACAACAGGCAAACCCGAGCAATTCATAAAAGCA--GAGACACCTGGGAGTGATA * * BM138225Ld06P003F01F07C1 ATGG-------------------------------------------------------- BM138225Ld05P003F01F07C1 ------------------------------------------------------------ BM138225Ld07P003F01F07C1 --------CGTTTTA--------------------------------------------- BM138225As01P003F01F07C1 ATCTAAAGCATTATG--------------------------------------------- BM138225Ld02P003F01F07C1 ATCTAAAGCATTATGCCATCCTCGCCAAATATAAAATCACTAGTGAATT--CGCGGCCGC BM138225At01P003F01F07C1 ATCTAAAGCATTATGCCA------------------------------------------ BM138225At02P003F01F07C1 ATCTAAAGCATTATG--------------------------------------------- BM138225Ld08P003F01F07C1 ATCTAAAGCATTATGCCATCCTCGCCAAATATAAAATCACTAGTGAATT--CGCGGCCGC BM138225Ld01P003F01F07C1 ATCTAAAGCATTATGCCATCCTCGCCAAATATAAAATCACTAGTGAATT--CGCGGCCGC BM138225Ld04P003F01F07C1 ATCTAAAGCATTATGCCATCCTCGCCAAATATAAAATC------GAATTCCCGCGGCCGC BM138225Ld09P003F01F07C1 ATCTAAAGCATTATGCCATCCTCGCCAAATATAAAATC------GAATTCCCGCGGCCGC BM138225Ld10P003F01F07C1 ATCTAAAGCATTATGCCATCCTCGCCAAATATAAAATC------GAATTCCCGCGGCCGC BM138225Tu01P003F01F07C1 ATCTAAAGCATTATGCC------------------------------------------- BM138225Ld06P003F01F07C1 ------------------------------------------------------------ BM138225Ld05P003F01F07C1 ------------------------------------------------------------ BM138225Ld07P003F01F07C1 ------------------------------------------------------------ BM138225As01P003F01F07C1 ------------------------------------------------------------ BM138225Ld02P003F01F07C1 C-TGCAGGTCGACCATATGGGAGAGCTCCCAACGCGTTGGATGCATAGCTTGAGTATTCT BM138225At01P003F01F07C1 ------------------------------------------------------------ BM138225At02P003F01F07C1 ------------------------------------------------------------ BM138225Ld08P003F01F07C1 C-TGCAGGTCGACCATATGGGAGAGCTCCCAACGCGTTGGATGCATAGCTTGAGTATTCT BM138225Ld01P003F01F07C1 C-TGCAGGTCGACCATATGGGAGAGCTCCCAACGCGTTGGATGCATAGCTTGAGTATTCT BM138225Ld04P003F01F07C1 CATGGCGGCCGGGAGCATGCGA------------CGTCGGGCCCAATTC------GCCCT BM138225Ld09P003F01F07C1 CATGGCGGCCGGGAGCATGCGA------------CGTCGGGCCCAATTC------GCCCT BM138225Ld10P003F01F07C1 CATGGCGGCCGGGAGCATGCGA------------CGTCGGGCCCAATTC------GCCCT BM138225Tu01P003F01F07C1 ------------------------------------------------------------ BM138225Ld06P003F01F07C1 -------------------------------- BM138225Ld05P003F01F07C1 -------------------------------- BM138225Ld07P003F01F07C1 -------------------------------- BM138225As01P003F01F07C1 -------------------------------- BM138225Ld02P003F01F07C1 ATAGTGTCACCTAAATAGCTTGGCGTAA---- BM138225At01P003F01F07C1 -------------------------------- BM138225At02P003F01F07C1 -------------------------------- BM138225Ld08P003F01F07C1 ATAGTGTCACCTAAATAGCTTGGCGTAATCAT BM138225Ld01P003F01F07C1 ATAGTGTCACCTAAATAGCTTGGCGTAA---- BM138225Ld04P003F01F07C1 ATAGTGAGTCGTATTACAATT----------- BM138225Ld09P003F01F07C1 ATAGTGAGTCGTATTACAATT----------- BM138225Ld10P003F01F07C1 ATAGTGAGTCGTATTACAATTCAC-------- BM138225Tu01P003F01F07C1 --------------------------------