MUSCLE (3.6) multiple sequence alignment BM138225Sn31P078H06P059H111F2_04 GAAGGGGAAGCCTTTTAACTTTTCC--------------------------TCCGTGATG BM138225Sn30P078H06P059H111F2_08 GAAGGGGAAGCCTTTTAACTTTTCCTTCTTGATG-------------------------- BM138225Td08P078H06P059H111F2_07 ------------------------------------------------------------ BM138225Ld06P003F01F07F1_048.ab1 ----------TCTCGCCTCGTCTCCGTCAATATTCTGTGTTCCCGGCCGCATCC-TCATG BM138225Ld05P003F01F07F1_044.ab1 -------------------------------------TC---CCAATG-----AGACATG BM138225Ld07P003F01F07F1_060.ab1 ----------------------------------------------CCCAATGAGACATG BM138225As01P003F01F07F1_072.ab1 ---AGAGAGCTATTTTATAGTTTTCATATAGATGATGTG---CCAGCAGAGTCAGTTATG BM138225Ld02P003F01F07F1_016.ab1 ---------------------------ATAGATGATGTG---CCAGCGGAGTCAGTTGTG BM138225At01P003F01F07F1_084.ab1 -----AGAGCTATTTTATAGTTTTC-TATAGATGATGTG---CCAGCGGAGTCAGTTATG BM138225At02P003F01F07F1_088.ab1 ----GAGAGCTATTTTATAGTTTTCATATAGATGATGTG---CCAGCGGAGTCAGTTATG BM138225Ld08P003F01F07F1_064.ab1 ---AGAGAGCTATTTT-TAGTTTTCGTATAGATGATGTG---CCAGCGGAGTCAGTTATG BM138225Ld01P003F01F07F1_012.ab1 ---------------------------ATAGATGATGTG---CCAGCGGAGTCAGTTATG BM138225Tu01P003F01F07F1_068.ab1 ---AGAGAGCTATTTTATAGTTTTC-TATAGATGATGTG---CCAGCGGAGTCAGTTATG BM138225Ld09P003F01F07F1_076.ab1 ---AGAGAGCTATTTTATAGTTTTCATATAGATGATGTG---CCAGCGGAGTCAGTTATG BM138225Ld04P003F01F07F1_032.ab1 ----GAGAGCTATTTTATAGTTTTC-TATAGATGATGTG---CCAGCGGAGTCAGTTATG BM138225Ld10P003F01F07F1_080.ab1 ---AGAGAGCTATTTTATAGTTTTC-TATAGATGATGTG---CCAGCGGAGTCAGTTATG BM138225Sn31P078H06P059H111F2_04 -GGAAAACAT----------------------------------CTCCCAAATAA--TAG BM138225Sn30P078H06P059H111F2_08 -----------------------------ACAAAACA------TCTCCCAAATAA--TAG BM138225Td08P078H06P059H111F2_07 --ACGGATGCG---AGCCCCTCCTCCGCCGTT-----------ATTGCCGGGCCAACAAC BM138225Ld06P003F01F07F1_048.ab1 TCACAGGTATACTAGGTATACCCAACTCCA------------------------------ BM138225Ld05P003F01F07F1_044.ab1 ----------GT--AGTCGAC-----------GATCCGGCACCAACCCCC---------- BM138225Ld07P003F01F07F1_060.ab1 ----------GT--AGTCGAC-----------GATCCGGCACCAACCCC----------- BM138225As01P003F01F07F1_072.ab1 -CACAAATGTGT--GGTCCATTTCATTCCACTGAACAAGCAG-ATTCCCAGTCGA--AAG BM138225Ld02P003F01F07F1_016.ab1 -CACAAATGTGT--GGTACATTTCATTCCACTGAACAAGCAG-ATTCCCAGTCGA--AAG BM138225At01P003F01F07F1_084.ab1 -CACAAATGTGT--AGTCCATTTCATTCCACTGAACAAGCAG-ATTCCCAGTCGA--AAG BM138225At02P003F01F07F1_088.ab1 -CACAAATGTGT--AGTCCATTTCATTCCACTGAACAAGCAG-ATTCCCAGTCGA--AAG BM138225Ld08P003F01F07F1_064.ab1 -CACAAATGTGT--GGTCCATTTCATTCCACTGAACAAGCAG-ATTCCCAGTCGA--AAG BM138225Ld01P003F01F07F1_012.ab1 -CACAAATGTGT--GGTCCATTTCATTCCACTGAACAAGCAG-ATTCCCAGTCGA--AAG BM138225Tu01P003F01F07F1_068.ab1 -CACAAATGTGT--GGTCCATTTCATTCCACTGAACAAGCAG-ATTCCCAGTCGA--AAG BM138225Ld09P003F01F07F1_076.ab1 -CACAAATGTGT--GGTCCATTTCATTCCACTGAACAAGCAG-ATTCCCAGTCGA--AAG BM138225Ld04P003F01F07F1_032.ab1 -CACAAATGTGT--GGTCCATTTCATTCCACTGAACAAGCAG-ATTCCCAGTCGA--AAG BM138225Ld10P003F01F07F1_080.ab1 -CACAAATGTGT--GGTCCATTTCATTCCACTGAACAAGCAG-ATTCCCAGTCGA--AAG BM138225Sn31P078H06P059H111F2_04 GTTAATC----CAGGGTGCTTTTATC---------------------------------- BM138225Sn30P078H06P059H111F2_08 GATAATC----CAGGGTGCTTTT------------------------------------- BM138225Td08P078H06P059H111F2_07 GAACGCCCGCTCCTGACCCATTGTCA----------------ACCTGCCATGATACTG-- BM138225Ld06P003F01F07F1_048.ab1 ----ACC----CTGATCTTTT--------------------CAATCGCGATTAGACCGTG BM138225Ld05P003F01F07F1_044.ab1 -----------------------TCC------TCCGCGCCATCCTCGCCAAATA------ BM138225Ld07P003F01F07F1_060.ab1 ---CTCC-------------------------TCCGCGCCATCCTCGCCAAATA------ BM138225As01P003F01F07F1_072.ab1 GAACACC----CTGGGTTCATTGTCCAAAAAGTTTACGACACAGTTGCGAAGAAATTGTG BM138225Ld02P003F01F07F1_016.ab1 GAACACC----CTGGGTTCATTGTCCAAAAAGTTTACGACACAGTTGCGAAGAAATTGTG BM138225At01P003F01F07F1_084.ab1 GAACACC----CTGGATTCATTGTCCAAAAAGTTTACGACACAGTTGCGAAGAAATTGTG BM138225At02P003F01F07F1_088.ab1 GAACACC----CTGGATTCATTGTCCAAAAAGTTTACGACACAGTTGCGAAGAAATTGTG BM138225Ld08P003F01F07F1_064.ab1 GAACACC----CTGGATTCATTGTCCAAAAAGTTTACGACACAGTTGCGAAGAAATTGTG BM138225Ld01P003F01F07F1_012.ab1 GAACACC----CTGGATTCATTGTCCAAAAAGTTTACGACACAGTTGCGAAGAAATTGTG BM138225Tu01P003F01F07F1_068.ab1 GAACACC----CTGGATTCATTGTCCAAAAAGTTTACGACACAGTTGCGAAGAAATTGTG BM138225Ld09P003F01F07F1_076.ab1 GAACACC----CTGGATTCATTGTCCAAAAAGTTTACGACACAGTTGCGAAGAAATTGTG BM138225Ld04P003F01F07F1_032.ab1 GAACACC----CTGGATTCATTGTCCAAAAAGTTTACGACACAGTTGCGAAGAAATTGTG BM138225Ld10P003F01F07F1_080.ab1 GAACACC----CTGGATTCATTGTCCAAAAAGTTTACGACACAGTTGCGAAGAAATTGTG BM138225Sn31P078H06P059H111F2_04 --------------------------------------------CCGAACTGTTCCT--- BM138225Sn30P078H06P059H111F2_08 -----------------------------------------------ATCCCATCCTG-- BM138225Td08P078H06P059H111F2_07 ----------------------------------------GACATCAATCTCC------- BM138225Ld06P003F01F07F1_048.ab1 GAGT------------------------------CGTCCCTAGATCCATGCCATC----- BM138225Ld05P003F01F07F1_044.ab1 ----------------------------------------TAAATCGAATTCCCG----- BM138225Ld07P003F01F07F1_060.ab1 ----------------------------------------TAAATCGAATTCCCG----- BM138225As01P003F01F07F1_072.ab1 GAACTTAACAGATAAGGATTATGAGGATAACAAGCAACACGAAATCAATCTCCTCGTGAA BM138225Ld02P003F01F07F1_016.ab1 GAACTTAACAGATAAGGATTATGAGGATAACAAGCAACACGAAATCGATCTCCTCGTGAA BM138225At01P003F01F07F1_084.ab1 GAACTTAACAGATAAGGATTATGAGGATAACAAGCAACACGAAATCGATCTCCTCGTGAA BM138225At02P003F01F07F1_088.ab1 GAACTTAACAGATAAGGATTATGAGGATAACAAGCAACACGAAATCGATCTCCTCGTGAA BM138225Ld08P003F01F07F1_064.ab1 GAACTTAACAGATAAGGATTATGAGGATAACAAGCAACACGAAATCGATCTCCTCGTGAA BM138225Ld01P003F01F07F1_012.ab1 GAACTTAACAGATAAGGATTATGAGGATAACAAGCAACACGAAATCGATCTCCTCGTGAA BM138225Tu01P003F01F07F1_068.ab1 GAACTTAACAGATAAGGATTATGAGGATAACAAGCAACACGAAATCGATCTCCTCGTGAA BM138225Ld09P003F01F07F1_076.ab1 GAACTTAACAGATAAGGATTATGAGGATAACAAGCAACACGAAATCGATCTCCTCGTGAA BM138225Ld04P003F01F07F1_032.ab1 GAACTTAACAGATAAGGATTATGAGGATAACAAGCAACACGAAATCGATCTCCTCGTGAA BM138225Ld10P003F01F07F1_080.ab1 GAACTTAACAGATAAGGATTATGAGGATAACAAGCAACACGAAATCGATCTCCTCGTGAA * BM138225Sn31P078H06P059H111F2_04 -----------------------ATCCTGTTGACT-AT-------TACACGTGTATTCTT BM138225Sn30P078H06P059H111F2_08 --------------------------TTCCTATCCTGTTAACTATTACACGTGTATTCTT BM138225Td08P078H06P059H111F2_07 ------------------------------------------------------------ BM138225Ld06P003F01F07F1_048.ab1 -------------------------CTCGCCAAAT-ATAAAA--TCACTAGTGAATTCGC BM138225Ld05P003F01F07F1_044.ab1 ------------------CGGCCGCCATGGCGGCC-GGGAGC--AT-------------- BM138225Ld07P003F01F07F1_060.ab1 ------------------CGGCCGCCATGGCGGCC-GGGAGC------------------ BM138225As01P003F01F07F1_072.ab1 GAAAACAGTGGACCGTATCGGACAGCTTCCTGACC-GTGAAC--CTATAGATGTACCTGC BM138225Ld02P003F01F07F1_016.ab1 GAAAACAGTGGACCGTATTGGACAGCTTCCTGACC-GTGAAC--CTATAGATGTACCTGC BM138225At01P003F01F07F1_084.ab1 GAAAACAGTGGACCGTATTGGACAGCTTCCTGACC-GTGAAC--CTATAGATGTACCTGC BM138225At02P003F01F07F1_088.ab1 GAAAACAGTGGACCGTATTGGACAGCTTCCTGACC-GTGAAC--CTATAGATGTACCTGC BM138225Ld08P003F01F07F1_064.ab1 GAAAACAGTGGACCATATTGGACAGCTTCCTGACC-GTGAAC--CTATAGATGTACCTGC BM138225Ld01P003F01F07F1_012.ab1 GAAAACAGTGGACCGTATTGGACAGCTTCCTGACC-GTGAAC--CTATAGATGTACCTGC BM138225Tu01P003F01F07F1_068.ab1 GAAAACAGTGGACCGTATTGGACAGCTTCCTGACC-GTGAAC--CTATAGATGTACCTGC BM138225Ld09P003F01F07F1_076.ab1 GAAAACAGTGGACCGTATTGGACAGCTTCCTGACC-GTGAAC--CTATAGATGTACCTGC BM138225Ld04P003F01F07F1_032.ab1 GAAAACAGTGGACCGTATTGGACAGCTTCCTGACC-GTGAAC--CTATAGATGTACCTGC BM138225Ld10P003F01F07F1_080.ab1 GAAAACAGTGGACCGTATTGGACAGCTTCCTGACC-GTGAAC--CTATAGATGTACCTGC BM138225Sn31P078H06P059H111F2_04 TAACTGGAACTGAACGGGTTGGGATTAAA----------------GGTCCCCGAATTTAC BM138225Sn30P078H06P059H111F2_08 TAACTGGAACTGAACGGGTTGGGATTAAA----------------GGTCCCCGAATT--- BM138225Td08P078H06P059H111F2_07 -------------------------------------------GGGCTCTCC-------- BM138225Ld06P003F01F07F1_048.ab1 GGCCGCCTGCAGGTC------------------GACCATATGGGAGAGCTCCCAACG--C BM138225Ld05P003F01F07F1_044.ab1 -------------------------------------------GCGACGTCGGGCCC--A BM138225Ld07P003F01F07F1_060.ab1 -----------------------------------------ATGCGACGTCGGGCCC--A BM138225As01P003F01F07F1_072.ab1 TGAC-AGTACTGATCAGTTCTCAAATAAACGCGGTCTACGAAAGAGACCTCCAAACC--C BM138225Ld02P003F01F07F1_016.ab1 TGAC-AGTACTGATCAGTTCTCAAATAAACGCGGTCTACGAAAGAGACCTCCAAACC--C BM138225At01P003F01F07F1_084.ab1 TGAC-AGTACTGATCAGTTCTCAAATAAACGCGGTCTACGAAAGAGACCTCCGAACC--C BM138225At02P003F01F07F1_088.ab1 TGAC-AGTACTGATCAGTTCTCAAATAAACGCGGTCTACGAAAGAGACCTCCGAACC--C BM138225Ld08P003F01F07F1_064.ab1 TGAC-AGTACTGATCAGTTCTCAAATAAACGCGGTCTACGAAAGAGACCTCCGAACC--C BM138225Ld01P003F01F07F1_012.ab1 TGAC-AGTACTGATCAGTTCTCAAATAAACGCGGTCTACGAAAGAGACCTCCGAACC--C BM138225Tu01P003F01F07F1_068.ab1 TGAC-AGTACTGATCAGTTCTCAAATAAACGCGGTCTACGAAAGAGACCTCCGAACC--C BM138225Ld09P003F01F07F1_076.ab1 TGAC-AGTACTGATCAGTTCTCAAATAAACGCGGTCTACGAAAGAGACCTCCGAACC--C BM138225Ld04P003F01F07F1_032.ab1 TGAC-AGTACTGATCAGTTCTCAAATAAACGCGGTCTACGAAAGAGACCTCCGAACC--C BM138225Ld10P003F01F07F1_080.ab1 TGAC-AGTACTGATCAGTTCTCAAATAAACGCGGTCTACGAAAGAGACCTCCGAACC--C * * BM138225Sn31P078H06P059H111F2_04 TTTCTATTTGGGAAAAGGTTTGCC------------------------------------ BM138225Sn30P078H06P059H111F2_08 ------------------------------------------------------------ BM138225Td08P078H06P059H111F2_07 ------------------------------------------------------------ BM138225Ld06P003F01F07F1_048.ab1 GTTGGATGCAT------------------AGCTTGAGTATTCTATAGTGTCACCTAAATA BM138225Ld05P003F01F07F1_044.ab1 ATTCGCCCTATAGTGAGTCGTATTA------------CAATTCACT-------------- BM138225Ld07P003F01F07F1_060.ab1 ATTCGCCCTATAGTGAGTCGTATTA------------CAATTCA---------------- BM138225As01P003F01F07F1_072.ab1 TTTAGATGTGTCGAGAGATACAACAGGCAAACCCGAGCAATTCATAAAAGCA--GAGACA BM138225Ld02P003F01F07F1_016.ab1 TTTAGACGTGTCGAGAGATACAACAGGCAAACCCGAGCAATTCATAAAAGCA--GAGACA BM138225At01P003F01F07F1_084.ab1 TTTAGACGTGTCGAGAGATACAACAGGCAAACCCGAGCAATTCATAAAAGCA--GAGACA BM138225At02P003F01F07F1_088.ab1 TTTAGACGTGTCGAGAGATACAACAGGCAAACCCGAGCAATTCATAAAAGCA--GAGACA BM138225Ld08P003F01F07F1_064.ab1 TTTAGACGTGTCGAAAGATACAACAGGCAAACCCGAGCAACTCATAAAAGCA--GAGACA BM138225Ld01P003F01F07F1_012.ab1 TTTAGACGTGTCGAAAGATACAACAGGCAAACCCGAGCAATTCATAAAAGCA--GAGACA BM138225Tu01P003F01F07F1_068.ab1 TTTAGACGTGTCGAGAGATACAACAGGCAAACCCGAGCAATTCATAAAAGCA--GAGACA BM138225Ld09P003F01F07F1_076.ab1 TTTAGACGTGTCGAAAGATACAACAGGCAAACCCGAGCAATTCATAAAAGCA--GAGACA BM138225Ld04P003F01F07F1_032.ab1 TTTAGACGTGTCGAAAGATACAACAGGCAAACCCGAGCAATTCATAAAAGCA--GAGACA BM138225Ld10P003F01F07F1_080.ab1 TTTAGACGTGTCGAAAGATACAACAGGCAAACCCGAGCAATTCATAAAAGCA--GAGACA BM138225Sn31P078H06P059H111F2_04 ---------------CTAAG---------------------------------------- BM138225Sn30P078H06P059H111F2_08 ------------------------------------------------------------ BM138225Td08P078H06P059H111F2_07 ------------------------------------------------------------ BM138225Ld06P003F01F07F1_048.ab1 GCTTGGCGTAATCATGG------------------------------------------- BM138225Ld05P003F01F07F1_044.ab1 ------------------------------------------------------------ BM138225Ld07P003F01F07F1_060.ab1 -CTGGCGGT------------CGTTTTA-------------------------------- BM138225As01P003F01F07F1_072.ab1 CCTGGGAGTGATAATCTAAAGCATTATG-------------------------------- BM138225Ld02P003F01F07F1_016.ab1 CCTGGGAGTGATAATCTAAAGCATTATGCCATCCTCGCCAAATATAAAATCACTAGTGAA BM138225At01P003F01F07F1_084.ab1 CCCGGGAGTGATAATCTAAAGCATTATGCCA----------------------------- BM138225At02P003F01F07F1_088.ab1 CCCGGGAGTGATAATCTAAAGCATTATG-------------------------------- BM138225Ld08P003F01F07F1_064.ab1 CCTGGGAGTGATAATCTAAAGCATTATGCCATCCTCGCCAAATATAAAATCACTAGTGAA BM138225Ld01P003F01F07F1_012.ab1 CCTGGGAGTGATAATCTAAAGCATTATGCCATCCTCGCCAAATATAAAATCACTAGTGAA BM138225Tu01P003F01F07F1_068.ab1 CCTGGGAGTGATAATCTAAAGCATTATGCC------------------------------ BM138225Ld09P003F01F07F1_076.ab1 CCTGGGAGTGATAATCTAAAGCATTATGCCATCCTCGCCAAATATAAAATC------GAA BM138225Ld04P003F01F07F1_032.ab1 CCTGGGAGTGATAATCTAAAGCATTATGCCATCCTCGCCAAATATAAAATC------GAA BM138225Ld10P003F01F07F1_080.ab1 CCTGGGAGTGATAATCTAAAGCATTATGCCATCCTCGCCAAATATAAAATC------GAA BM138225Sn31P078H06P059H111F2_04 ------------------------------------------------------------ BM138225Sn30P078H06P059H111F2_08 ------------------------------------------------------------ BM138225Td08P078H06P059H111F2_07 ------------------------------------------------------------ BM138225Ld06P003F01F07F1_048.ab1 ------------------------------------------------------------ BM138225Ld05P003F01F07F1_044.ab1 ------------------------------------------------------------ BM138225Ld07P003F01F07F1_060.ab1 ------------------------------------------------------------ BM138225As01P003F01F07F1_072.ab1 ------------------------------------------------------------ BM138225Ld02P003F01F07F1_016.ab1 TT--CGCGGCCGCC-TGCAGGTCGACCATATGGGAGAGCTCCCAACGCGTTGGATGCATA BM138225At01P003F01F07F1_084.ab1 ------------------------------------------------------------ BM138225At02P003F01F07F1_088.ab1 ------------------------------------------------------------ BM138225Ld08P003F01F07F1_064.ab1 TT--CGCGGCCGCC-TGCAGGTCGACCATATGGGAGAGCTCCCAACGCGTTGGATGCATA BM138225Ld01P003F01F07F1_012.ab1 TT--CGCGGCCGCC-TGCAGGTCGACCATATGGGAGAGCTCCCAACGCGTTGGATGCATA BM138225Tu01P003F01F07F1_068.ab1 ------------------------------------------------------------ BM138225Ld09P003F01F07F1_076.ab1 TTCCCGCGGCCGCCATGGCGGCCGGGAGCATGCGA------------CGTCGGGCCCAAT BM138225Ld04P003F01F07F1_032.ab1 TTCCCGCGGCCGCCATGGCGGCCGGGAGCATGCGA------------CGTCGGGCCCAAT BM138225Ld10P003F01F07F1_080.ab1 TTCCCGCGGCCGCCATGGCGGCCGGGAGCATGCGA------------CGTCGGGCCCAAT BM138225Sn31P078H06P059H111F2_04 --------------------------------------------- BM138225Sn30P078H06P059H111F2_08 --------------------------------------------- BM138225Td08P078H06P059H111F2_07 --------------------------------------------- BM138225Ld06P003F01F07F1_048.ab1 --------------------------------------------- BM138225Ld05P003F01F07F1_044.ab1 --------------------------------------------- BM138225Ld07P003F01F07F1_060.ab1 --------------------------------------------- BM138225As01P003F01F07F1_072.ab1 --------------------------------------------- BM138225Ld02P003F01F07F1_016.ab1 GCTTGAGTATTCTATAGTGTCACCTAAATAGCTTGGCGTAA---- BM138225At01P003F01F07F1_084.ab1 --------------------------------------------- BM138225At02P003F01F07F1_088.ab1 --------------------------------------------- BM138225Ld08P003F01F07F1_064.ab1 GCTTGAGTATTCTATAGTGTCACCTAAATAGCTTGGCGTAATCAT BM138225Ld01P003F01F07F1_012.ab1 GCTTGAGTATTCTATAGTGTCACCTAAATAGCTTGGCGTAA---- BM138225Tu01P003F01F07F1_068.ab1 --------------------------------------------- BM138225Ld09P003F01F07F1_076.ab1 TC------GCCCTATAGTGAGTCGTATTACAATT----------- BM138225Ld04P003F01F07F1_032.ab1 TC------GCCCTATAGTGAGTCGTATTACAATT----------- BM138225Ld10P003F01F07F1_080.ab1 TC------GCCCTATAGTGAGTCGTATTACAATTCAC--------