MUSCLE (3.6) multiple sequence alignment BQ167076Tu01P081A05P081A111C1 ------------------------------------------------------------ BQ167076Tu02P081A05P081A111C1 ------------------------------------------------------------ BQ167076At01P081A05P081A111C1 ------------------------------------------------------------ BQ167076At02P081A05P081A111C1 ------------------------------------------------------------ BQ167076Ld11P081A05P081A111C1 CCATGATTACGCCAAGCTATTTAGGTGACACTATAGAATACTCAAGCTATGCATCCAACG BQ167076As01P081A05P081A111C1 ------------------------------------------------------------ BQ167076As02P081A05P081A111C1 ------------------------------------------------------------ BQ167076Ld09P081A05P081A111C1 -----------------------------AGTGAATTGTAATACGACTCACTATAGGGCG BQ167076Ld10P081A05P081A111C1 -------------------------GGCCAGTGAATTGTAATACGACTCACTATAGGGCG BQ167076Tu01P081A05P081A111C1 ------------------------------------------------------------ BQ167076Tu02P081A05P081A111C1 ------------------------------------------------------------ BQ167076At01P081A05P081A111C1 ------------------------------------------------------------ BQ167076At02P081A05P081A111C1 -----------------------------------------------------------T BQ167076Ld11P081A05P081A111C1 CGTTGGGAGCTCTCCCATATGGTC---GACCTGCAGGCGGCCGCGAATTCACTAGTGATT BQ167076As01P081A05P081A111C1 -----------------------------------------------------------T BQ167076As02P081A05P081A111C1 -----------------------------------------------------------T BQ167076Ld09P081A05P081A111C1 AATTGGGCCCGACGTCGCATGCTCCCGGCCGCCATGGCGGCCGCGGGAATTC----GATT BQ167076Ld10P081A05P081A111C1 AATTGGGCCCGACGTCGCATGCTCCCGGCCGCCATGGCGGCCGCGGGAATTC----GATT BQ167076Tu01P081A05P081A111C1 -CGCTTTATTTGTCACACCAAAAAATGAATTGAATTATAGTAGTGTAGTGCATGCTTTCT BQ167076Tu02P081A05P081A111C1 -CGCTTTATTTGTCACACCAAAAAATGAATTGAATTATAGTAGTGTAGTGCATGCTTTCT BQ167076At01P081A05P081A111C1 -----------GTCACACCAAAAAATGAATTGAATTGTAGTAGTGTAGTGCATGCTTTCT BQ167076At02P081A05P081A111C1 GCGCTTTATTTGTCACACCAAAAAATGAATTGAATTATAGTAGTGTAGTGCATGCTTTCT BQ167076Ld11P081A05P081A111C1 GCGCTTTATTTGTCACACCAAAAAATGAATTGAATTATAGTAGTGTAGTGCATGCTTTCT BQ167076As01P081A05P081A111C1 GCGCTTTATTTGTCACACCAAAAAATGAATTGAATTATAGTAGTGTAGTGCATGCTTTCT BQ167076As02P081A05P081A111C1 GCGCTTTATTTGTCACACCAAAAAATGAATTGAATTATAGTAGTGTAGTGCATGCTTTCT BQ167076Ld09P081A05P081A111C1 GCGCTTTATTTGTCACACCAAAAAATGAATTGAATTATAGTAGTGTAGTGCATGCTTTCT BQ167076Ld10P081A05P081A111C1 GCGCTTTATTTGTCACACCAAAAAATGAATTGAATTATAGTAGTGTAGTGCATGCTTTCT ************************* *********************** BQ167076Tu01P081A05P081A111C1 AACATTAGTTGGTGTTACATCTGAACTGTTTGGGAGTTTTGCAATCCTAGAGCGTGCTGC BQ167076Tu02P081A05P081A111C1 AACATTAGTTGGTGTTACATCTGAACTGTTTGGGAGTTTTGCAATCCTAGAGCGTGCTGC BQ167076At01P081A05P081A111C1 AACATTAGTTGGTGTTACATCTGAACTGTTTGGGAGTTCTGCAATCCTAGAGCGTGCTGC BQ167076At02P081A05P081A111C1 AACATTAGTTGGTGTTACATCTGAACTGTTTGGGAGTTCTGCAATCCTAGAGCGTGCTGC BQ167076Ld11P081A05P081A111C1 AACATTAGTTGGTGTTACATCTGAACTGTTTGGGAGTTCTGCAATCCTAGAGCGTGCTGC BQ167076As01P081A05P081A111C1 AACATTAGTTGGTGTTACATCTGAACTGTTTGGGAGTTCTGCAATCCTAGAGCGTGCTGC BQ167076As02P081A05P081A111C1 AACATTAGTTGGTGTTACATCTGAACTGTTTGGGAGTTCTGCAATCCTAGAGCGTGCTGC BQ167076Ld09P081A05P081A111C1 AACATTAGTTGGTGTTACATCTGAACTGTTTGGGAGTTCTGCAATCCTAGAGCGTGCTGC BQ167076Ld10P081A05P081A111C1 AACATTAGTTGGTGTTACATCTGAACTGTTTGGGAGTTCTGCAATCCTAGAGCGTGCTGC ************************************** ********************* BQ167076Tu01P081A05P081A111C1 AATGACGCCCCATGCTGTTAGTCCTCTTCGACTTCATGAAAAGGAAGTGGAACAACCTTC BQ167076Tu02P081A05P081A111C1 AATGACGCCCCATGCTGTTAGTCCTCTTCGACTTCATGAAAAGGAAGTGGAACAACCTTC BQ167076At01P081A05P081A111C1 AATGACGCCCCATGCTGTTAGTTCTCTTCGACTTCATGAAAAGGAAGTGGAACAACCTTC BQ167076At02P081A05P081A111C1 AATGACGCCCCATGCTGTTAGTTCTCTTCGACTTCATGAAAAGGAAGTGGAACAACCTTC BQ167076Ld11P081A05P081A111C1 AATGACGCCTCATGCTGTTAGTCCTCTTCGACTTCATGAAAAGGAAGTGGAACAACCTTC BQ167076As01P081A05P081A111C1 AATGACGCCTCATGCTGTTAGTCCTCTTCGACTTCATGAAAAGGAAGTGGAACAACCTTC BQ167076As02P081A05P081A111C1 AATGACGCCTCATGCTGTTAGTCCTCTTCGACTTCATGAAAAGGAAGTGGAACAACCTTC BQ167076Ld09P081A05P081A111C1 AATGACGCCTCATGCTGTTAGTCCTCTTCGACTTCATGAAAAGGAAGTGGAACAACCTTC BQ167076Ld10P081A05P081A111C1 AATGACGCCTCATGCTGTTAGTCCTCTTCGACTTCATGAAAAGGAAGTGGAACAACCTTC ********* ************ ************************************* BQ167076Tu01P081A05P081A111C1 ACAGCTCTGAACTTCCCTGCATTGTTTAGGTGTTCGTTCTCCAGCCTGACATAGAAGTTT BQ167076Tu02P081A05P081A111C1 ACAGCTCTGAACTTCCCTGCATTGTTTAGGTGTTCGTTCTCCAGCCTGACATAGAAGTTT BQ167076At01P081A05P081A111C1 ACAGCTCTGAACTTCCCTGCATTGTTTAGGTGTTCGTTCTCCAGCCTGACAGAGAAGTTA BQ167076At02P081A05P081A111C1 ACAGCTCTGAACTTCCCTGCATTGTTTAGGTGTTCGTTCTCCAGCCTGACAGAGAAGTTA BQ167076Ld11P081A05P081A111C1 ACAGCTCTGAACTTCCCTGCATTGTTTAGGTGTTCGTTCTCCAGCCTGACAGAGAAGTTT BQ167076As01P081A05P081A111C1 ACAGCTCTGAACTTCCCTGCATTGTTTAGGTGTTCGTTCTCCAGCCTGACAGAGAAGTTT BQ167076As02P081A05P081A111C1 ACAGCTCTGAACTTCCCTGCATTGTTTAGGTGTTCGTTCTCCAGCCTGACAGAGAAGTTT BQ167076Ld09P081A05P081A111C1 ACAGCTCTGAACTTCCCTGCATTGTTTAGGTGTTCGTTCTCCAGCCTGACAGAGAAGTTT BQ167076Ld10P081A05P081A111C1 ACAGCTCTGAACTTCCCTGCATTGTTTAGGTGTTCGTTCTCCAGCCTGACAGAGAAGTTT *************************************************** ******* BQ167076Tu01P081A05P081A111C1 TTCATAATGTTCTTTTAGTGTAAATTCAGGCTTGTATATCCCTCACAATGAAAAATTTAA BQ167076Tu02P081A05P081A111C1 TTCATAATGTTCTTTTAGTGTAAATTCAGGCTTGTATATCCCTCACAATGAAAAATTTAA BQ167076At01P081A05P081A111C1 TTCATAATGTTCTTTTAGTGTAAATTCAGGCTTGTATATCCATCACAATGAAAAATTCAA BQ167076At02P081A05P081A111C1 TTCATAATGTTCTTTTAGTGTAAATTCAGGCTTGTATATCCATCACAATGAAAAATTCAA BQ167076Ld11P081A05P081A111C1 TTGGTAATGTTCTTTTAGTGTAAATTCAGGCTTGTATATCCATCACAATGAAAAATTCAA BQ167076As01P081A05P081A111C1 TTGGTAATATTCTTTTAGTGTAAATTCAGGCTTGTATATCCATCACAATGAAAAATTCAA BQ167076As02P081A05P081A111C1 TTGGTAATATTCTTTTAGTGTAAATTCAGGCTTGTATATCCATCACAATGAAAAATTCAA BQ167076Ld09P081A05P081A111C1 TTGGTAATGTTCTTTTAGTGTAAATTCAGGCTTGTATATCCATCACAATGAAAAATTCAA BQ167076Ld10P081A05P081A111C1 TTGGTAATGTTCTTTTAGTGTAAATTCAGGCTTGTATATCCATCACAATGAAAAATTCAA ** **** ******************************** *************** ** BQ167076Tu01P081A05P081A111C1 GACTTAGGATTCACTGGCAAAAACTTTACCTGTAGAAGTTCCAAAGGCCCCGTCGAATCA BQ167076Tu02P081A05P081A111C1 GACTTAGGATTCACTGGCAAAAACTTTACCTGTAGAAGTTCCAAAGGCCCCGTCGAATCA BQ167076At01P081A05P081A111C1 GACTTAGGATTCACTGGCAAAAACTTTACCTGTAGAAGTTCCAAAGGCC----------- BQ167076At02P081A05P081A111C1 GACTTAGGATTCACTGGCAAAAACTTTACCTGTAGAAGTTCCAAAGGCCCCGTCCAATCA BQ167076Ld11P081A05P081A111C1 GACTTAGGATTCACTGGCAAAAACTTTACCTGTAGAAGTTCCAAAGGCCCCGTCGAATCA BQ167076As01P081A05P081A111C1 GACTTAGGATTCACTGGCAAAAACTTTACCTGTAGAAGTTCCAAAGGCCCCGTCGAATCA BQ167076As02P081A05P081A111C1 GACTTAGGATTCACTGGCAAAAACTTTACCTGTAGAAGTTCCAAAGGCCCCGTCGAATCA BQ167076Ld09P081A05P081A111C1 GACTTAGGATTCACTGGCAAAAACTTTACCTGTAGAAGTTCCAAAGGCCCCGTCGAATCA BQ167076Ld10P081A05P081A111C1 GACTTAGGATTCACTGGCAAAAACTTTACCTGTAGAAGTTCCAAAGGCCCCGTCGAATCA ************************************************* BQ167076Tu01P081A05P081A111C1 CCTCAAGAGCTGCCAAAAAGAACAGAGTTACTCTAGAATCCAGGCTTCCAATGTTAGGGT BQ167076Tu02P081A05P081A111C1 CCTCAAGAGCTGCCAAAAAGAACAGAGTTACTCTAGAATCCAGGCTTCCAATGTTAGGGT BQ167076At01P081A05P081A111C1 ------------------------------------------------------------ BQ167076At02P081A05P081A111C1 CCTCAAGAGCTGCCAAAAAGAACAGAGTTACTCTAGAATCCATGCTTCCTATGTT----- BQ167076Ld11P081A05P081A111C1 CCTCAAGAGCTGCCAAAAAGAACAGAGTTACTCTAGAATCCAGGCTTCCAATGTTAGGGT BQ167076As01P081A05P081A111C1 CCTCAAGAGCTGCCAAAAAGAACAGAGTAACTCTAGAATCCAGGCTTCCAATGTTAGGGT BQ167076As02P081A05P081A111C1 CCTCAAGAGCTGCCAAAAAGAACAGAGTAACTCTAGAATCCAGGCTTCCAATGTTAGGGT BQ167076Ld09P081A05P081A111C1 CCTCAAGAGCTGCCAAAAAGAACAGAGTAACTCTAGAATCCAGGCTTCCAATGTTAGGGT BQ167076Ld10P081A05P081A111C1 CCTCAAGAGCTGCCAAAAAGAACAGAGTAACTCTAGAATCCAGGCTTCCAATGTTAGGGT BQ167076Tu01P081A05P081A111C1 GGA----------------------GAACGAACACCTAAACAATGCAGGGA--------- BQ167076Tu02P081A05P081A111C1 GG---------------------------------------------------------- BQ167076At01P081A05P081A111C1 ------------------------------------------------------------ BQ167076At02P081A05P081A111C1 ------------------------------------------------------------ BQ167076Ld11P081A05P081A111C1 GGAATC----GAATTCCCGCGGCCGCCATGGCGGCCGGGAGCATGCGACGTCGGGCCCAA BQ167076As01P081A05P081A111C1 GGA--------------------------------------------------------- BQ167076As02P081A05P081A111C1 GGA--------------------------------------------------------- BQ167076Ld09P081A05P081A111C1 GGAATCACTAGTGAATTCGCGGCCGCCTGCAGGTC---GACCATATGGGAGAGCTCCCAA BQ167076Ld10P081A05P081A111C1 GGAATCACTAGTGAATTCGCGGCCGCCTGCAGGTC---GACCATATGGGAGAGCTCCCAA BQ167076Tu01P081A05P081A111C1 ------------------------------------------------------------ BQ167076Tu02P081A05P081A111C1 ------------------------------------------------------------ BQ167076At01P081A05P081A111C1 ------------------------------------------------------------ BQ167076At02P081A05P081A111C1 ------------------------------------------------------------ BQ167076Ld11P081A05P081A111C1 TTCGCCCTATAGTGAGTCGTATTACAATTCACTGG------------------------- BQ167076As01P081A05P081A111C1 ------------------------------------------------------------ BQ167076As02P081A05P081A111C1 ------------------------------------------------------------ BQ167076Ld09P081A05P081A111C1 CGCGTTGGATGCATAGCTTGAGTATTCTATAGTGTCACCTAAATAGCTTGGCGTAATCAT BQ167076Ld10P081A05P081A111C1 CGCGTTGGATGCATAGCTTGAGTATTCTATAGTGTCACCTAAATAGCTTGGCGTAATCAT BQ167076Tu01P081A05P081A111C1 --- BQ167076Tu02P081A05P081A111C1 --- BQ167076At01P081A05P081A111C1 --- BQ167076At02P081A05P081A111C1 --- BQ167076Ld11P081A05P081A111C1 --- BQ167076As01P081A05P081A111C1 --- BQ167076As02P081A05P081A111C1 --- BQ167076Ld09P081A05P081A111C1 GGT BQ167076Ld10P081A05P081A111C1 GGT