MUSCLE (3.6) multiple sequence alignment BQ167076Ld11P081A05P081A111F1_07 TGCATGCTTTCT-ACATTAGTTGGTGTTACATCTGAACTGTTTGGGAGTTCTGCAATCCT BQ167076As01P081A05P081A111F1_07 --------------CATTAGTTGGTGTTACATCTGAACTGTTTGGGAGTTCTGCAATCCT BQ167076As02P081A05P081A111F1_07 ---ATGCTTTCT-ACATTAGTTGGTGTTACATCTGAACTGTTTGGGAGTTCTGCAATCCT BQ167076Ld09P081A05P081A111F1_07 ----TGCTTTCT-ACATTAGTTGGTGTTACATCTGAACTGTTTGGGAGTTCTGCAATCCT BQ167076Ld10P081A05P081A111F1_07 -----GCTTTCT-ACATTAGTTGGTGTTACATCTGAACTGTTTGGGAGTTCTGCAATCCT BQ167076Tu01P081A05P081A111F1_08 -----GCTTTCT-ACATTAGTTGGTGTTACATCTGAACTGTTTGGGAGTTTTGCAATCCT BQ167076Tu02P081A05P081A111F1_07 ------CTTTCTAACATTAGTTGGTGTTACATCTGAACTGTTTGGGAGTTTTGCAATCCT BQ167076At01P081A05P081A111F1_07 -----GCTTTCTAACATTAGTTGGTGTTACATCTGAACTGTTTGGGAGTTCTGCAATCCT BQ167076At02P081A05P081A111F1_07 ---------TCT-ACATTAGTTGGTGTTACATCTGAACTGTTTGGGAGTTCTGCAATCCT BQ167076Ld05P081A05P081A111F1_04 -------------------------------------------------------ATTCG BQ167076Ld03P081A05P081A111F1_02 ------------------------------------------------------------ BQ167076Ld11P081A05P081A111F1_07 AGAGCGTGCTGCAATGACGCCTCATGCTGTTAGTCCTCTTCGACTTCATGAAAAGGAAGT BQ167076As01P081A05P081A111F1_07 AGAGCGTGCTGCAATGACGCCTCATGCTGTTAGTCCTCTTCGACTTCATGAAAAGGAAGT BQ167076As02P081A05P081A111F1_07 AGAGCGTGCTGCAATGACGCCTCATGCTGTTAGTCCTCTTCGACTTCATGAAAAGGAAGT BQ167076Ld09P081A05P081A111F1_07 AGAGCGTGCTGCAATGACGCCTCATGCTGTTAGTCCTCTTCGACTTCATGAAAAGGAAGT BQ167076Ld10P081A05P081A111F1_07 AGAGCGTGCTGCAATGACGCCTCATGCTGTTAGTCCTCTTCGACTTCATGAAAAGGAAGT BQ167076Tu01P081A05P081A111F1_08 AGAGCGTGCTGCAATGACGCCCCATGCTGTTAGTCCTCTTCGACTTCATGAAAAGGAAGT BQ167076Tu02P081A05P081A111F1_07 AGAGCGTGCTGCAATGACGCCCCATGCTGTTAGTCCTCTTCGACTTCATGAAAAGGAAGT BQ167076At01P081A05P081A111F1_07 AGAGCGTGCTGCAATGACGCCCCATGCTGTTAGTTCTCTTCGACTTCATGAAAAGGAAGT BQ167076At02P081A05P081A111F1_07 AGAGCGTGCTGCAATGACGCCCCATGCTGTTAGTTCTCTTCGACTTCATGAAAAGGAAGT BQ167076Ld05P081A05P081A111F1_04 CGGCCGC-CTGCAGGG-----------------------TCGACCATATG---------- BQ167076Ld03P081A05P081A111F1_02 -------GCGGC------------CGCCGGCAGG-----TCGACCATAT----------- * ** ***** ** BQ167076Ld11P081A05P081A111F1_07 GGAACAACCTTCACAGCTCTGAACTTCCCTGCAT-TGTTTAGGTGTTCGTTCTCCAGCCT BQ167076As01P081A05P081A111F1_07 GGAACAACCTTCACAGCTCTGAACTTCCCTGCAT-TGTTTAGGTGTTCGTTCTCCAGCCT BQ167076As02P081A05P081A111F1_07 GGAACAACCTTCACAGCTCTGAACTTCCCTGCAT-TGTTTAGGTGTTCGTTCTCCAGCCT BQ167076Ld09P081A05P081A111F1_07 GGAACAACCTTCACAGCTCTGAACTTCCCTGCAT-TGTTTAGGTGTTCGTTCTCCAGCCT BQ167076Ld10P081A05P081A111F1_07 GGAACAACCTTCACAGCTCTGAACTTCCCTGCAT-TGTTTAGGTGTTCGTTCTCCAGCCT BQ167076Tu01P081A05P081A111F1_08 GGAACAACCTTCACAGCTCTGAACTTCCCTGCAT-TGTTTAGGTGTTCGTTCTCCAGCCT BQ167076Tu02P081A05P081A111F1_07 GGAACAACCTTCACAGCTCTGAACTTCCCTGCAT-TGTTTAGGTGTTCGTTCTCCAGCCT BQ167076At01P081A05P081A111F1_07 GGAACAACCTTCACAGCTCTGAACTTCCCTGCAT-TGTTTAGGTGTTCGTTCTCCAGCCT BQ167076At02P081A05P081A111F1_07 GGAACAACCTTCACAGCTCTGAACTTCCCTGCAT-TGTTTAGGTGTTCGTTCTCCAGCCT BQ167076Ld05P081A05P081A111F1_04 GGAGAAGCTCCCAACGCGTTGGA------TGCATANGCTTGAGTATTC------------ BQ167076Ld03P081A05P081A111F1_02 GGGAGAGCTCCCAACGCGTTGGAC------GCAT-AGCTTGAGTATTC------------ ** * * ** ** ** * **** * ** ** *** BQ167076Ld11P081A05P081A111F1_07 GACAGAGAAGTTTTTGGTAATGTTCTTTTAGTGTAAATTCAGGCTTGTATATCCATCACA BQ167076As01P081A05P081A111F1_07 GACAGAGAAGTTTTTGGTAATATTCTTTTAGTGTAAATTCAGGCTTGTATATCCATCACA BQ167076As02P081A05P081A111F1_07 GACAGAGAAGTTTTTGGTAATATTCTTTTAGTGTAAATTCAGGCTTGTATATCCATCACA BQ167076Ld09P081A05P081A111F1_07 GACAGAGAAGTTTTTGGTAATGTTCTTTTAGTGTAAATTCAGGCTTGTATATCCATCACA BQ167076Ld10P081A05P081A111F1_07 GACAGAGAAGTTTTTGGTAATGTTCTTTTAGTGTAAATTCAGGCTTGTATATCCATCACA BQ167076Tu01P081A05P081A111F1_08 GACATAGAAGTTTTTCATAATGTTCTTTTAGTGTAAATTCAGGCTTGTATATCCCTCACA BQ167076Tu02P081A05P081A111F1_07 GACATAGAAGTTTTTCATAATGTTCTTTTAGTGTAAATTCAGGCTTGTATATCCCTCACA BQ167076At01P081A05P081A111F1_07 GA---------------------------------------------------------- BQ167076At02P081A05P081A111F1_07 GACAGAGAAGTTATTCATAATGTTCTTTTAGTGTAAATTCAGGCTTGTATATCCATCACA BQ167076Ld05P081A05P081A111F1_04 --------------------------TATAGTG--------------------------- BQ167076Ld03P081A05P081A111F1_02 --------------------------TATAGTG--------------------------- BQ167076Ld11P081A05P081A111F1_07 ATGAAAAATTCAAGACTTAGGATTCACTGGCAAAAACTTTACCTGTAGAAGTTCCAAAGG BQ167076As01P081A05P081A111F1_07 ATGAAAAATTCAAGACTTAGGATTCACTGGCAAAAACTTTACCTGTAGAAGTTCCAAAGG BQ167076As02P081A05P081A111F1_07 ATGAAAAATTCAAGACTTAGGATTCACTGGCAAAAACTTTACCTGTAGAAGTTCCAAAGG BQ167076Ld09P081A05P081A111F1_07 ATGAAAAATTCAAGACTTAGGATTCACTGGCAAAAACTTTACCTGTAGAAGTTCCAAAGG BQ167076Ld10P081A05P081A111F1_07 ATGAAAAATTCAAGACTTAGGATTCACTGGCAAAAACTTTACCTGTAGAAGTTCCAAAGG BQ167076Tu01P081A05P081A111F1_08 ATGAAAAATTTAAGACTTAGGATTCACTGGCAAAAACTTTACCTGTAGAAGTTCCAAAGG BQ167076Tu02P081A05P081A111F1_07 ATGAAAAATTTAAGACTTAGGATTCACTGGCAAAAACTTTACCTGTAGAAGTTCCAAAGG BQ167076At01P081A05P081A111F1_07 ------------------------------------------------------------ BQ167076At02P081A05P081A111F1_07 ATGAAAAATTCAAGACTTAGGATTCACTGGCAAAAACTTTACCTGTAGAAGTTCCAAAGG BQ167076Ld05P081A05P081A111F1_04 ------------------------------------------------------------ BQ167076Ld03P081A05P081A111F1_02 ------------------------------------------------------------ BQ167076Ld11P081A05P081A111F1_07 CCCCGTCGAATCACCTCAAGAGCT----GCCAAAAAGAACAGAGTTACTCTAGAATCCAG BQ167076As01P081A05P081A111F1_07 CCCCGTCGAATCACCTCAAGAGCT----GCCAAAAAGAACAGAGTAACTCTAGAATCCAG BQ167076As02P081A05P081A111F1_07 CCCCGTCGAATCACCTCAAGAGCT----GCCAAAAAGAACAGAGTAACTCTAGAATCCAG BQ167076Ld09P081A05P081A111F1_07 CCCCGTCGAATCACCTCAAGAGCT----GCCAAAAAGAACAGAGTAACTCTAGAATCCAG BQ167076Ld10P081A05P081A111F1_07 CCCCGTCGAATCACCTCAAGAGCT----GCCAAAAAGAACAGAGTAACTCTAGAATCCAG BQ167076Tu01P081A05P081A111F1_08 CCCCGTCGAATCACCTCAAGAGCT----GCCAAAAAGAACAGAGTTACTCTAGAATCCAG BQ167076Tu02P081A05P081A111F1_07 CCCCGTCGAATCACCTCAAGAGCT----GCCAAAAAGAACAGAGTTACTCTAGAATCCAG BQ167076At01P081A05P081A111F1_07 ------------------------------------------------------------ BQ167076At02P081A05P081A111F1_07 CCCCGTCCAATCACCTCAAGAGCT----GCCAAAAAGAACAGAGTTACTCTAGAATCCAT BQ167076Ld05P081A05P081A111F1_04 ----------TCACCTAAATAGCTTGGCGTAATCATGGTCATAGCT-------------- BQ167076Ld03P081A05P081A111F1_02 ----------TCACCTAAATAGCTTGGCGTAATCATGGTCATAGCTGTTT---------- BQ167076Ld11P081A05P081A111F1_07 GCTTCCAATGTTAGGGTGGA-------ATCGAATTCCCGCGGCCGCCATGGCGGCCGGGA BQ167076As01P081A05P081A111F1_07 GCTTCCAATGTTAGGGTGGA---------------------------------------- BQ167076As02P081A05P081A111F1_07 GCTTCCAATGTTAGGGTGGA---------------------------------------- BQ167076Ld09P081A05P081A111F1_07 GCTTCCAATGTTAGGGTGGAATCACTAGTGAATTCGCGGCCGCCTGCAGGTCGACCATAT BQ167076Ld10P081A05P081A111F1_07 GCTTCCAATGTTAGGGTGGAATCACTAGTGAATTCGCGGCCGCCTGCAGGTCGACCATAT BQ167076Tu01P081A05P081A111F1_08 GCTTCCAATGTTAGGGTGGA---------------------------------------- BQ167076Tu02P081A05P081A111F1_07 GCTTCCAATGTTAGGGTGG----------------------------------------- BQ167076At01P081A05P081A111F1_07 ------------------------------------------------------------ BQ167076At02P081A05P081A111F1_07 GCTTCCTATGTT------------------------------------------------ BQ167076Ld05P081A05P081A111F1_04 GTTTCC------------------------------------------------------ BQ167076Ld03P081A05P081A111F1_02 ------------------------------------------------------------ BQ167076Ld11P081A05P081A111F1_07 GCATGCGACGTCGGGCCCAATTCGCCCTATAGTGAGTCGTATTACAATTCACTGG----- BQ167076As01P081A05P081A111F1_07 ------------------------------------------------------------ BQ167076As02P081A05P081A111F1_07 ------------------------------------------------------------ BQ167076Ld09P081A05P081A111F1_07 GGGAGAGCTCCCAACGCGTTGGATGCATAGCTTGAGTATTCTATAGTGTCACCTAAATAG BQ167076Ld10P081A05P081A111F1_07 GGGAGAGCTCCCAACGCGTTGGATGCATAGCTTGAGTATTCTATAGTGTCACCTAAATAG BQ167076Tu01P081A05P081A111F1_08 ------------------------------------------GAACGAACACCTAAACAA BQ167076Tu02P081A05P081A111F1_07 ------------------------------------------------------------ BQ167076At01P081A05P081A111F1_07 ------------------------------------------------------------ BQ167076At02P081A05P081A111F1_07 ------------------------------------------------------------ BQ167076Ld05P081A05P081A111F1_04 ------------------------------------------------------------ BQ167076Ld03P081A05P081A111F1_02 ------------------------------------------------------------ BQ167076Ld11P081A05P081A111F1_07 ----------------- BQ167076As01P081A05P081A111F1_07 ----------------- BQ167076As02P081A05P081A111F1_07 ----------------- BQ167076Ld09P081A05P081A111F1_07 CTTGGCGTAATCATGGT BQ167076Ld10P081A05P081A111F1_07 CTTGGCGTAATCATGGT BQ167076Tu01P081A05P081A111F1_08 TGCAGGGA--------- BQ167076Tu02P081A05P081A111F1_07 ----------------- BQ167076At01P081A05P081A111F1_07 ----------------- BQ167076At02P081A05P081A111F1_07 ----------------- BQ167076Ld05P081A05P081A111F1_04 ----------------- BQ167076Ld03P081A05P081A111F1_02 -----------------