MUSCLE (3.6) multiple sequence alignment BQ167076Ld07P081A05P081A111R1_04 ----------------CGTCGGGCCCAATTCGCCCTAT------------------AGTG BQ167076Ld08P081A05P081A111R1_04 -----------------GTCGA-------------------------------------- BQ167076Tu01P081A05P081A111R1_08 -----------------GACGGGGCCTTTGGAACTTCTACAGGTAAACTTTTTGCCAGTG BQ167076Tu02P081A05P081A111R1_07 -----------------GACGGGGCCTTTGGAACTTCTACAGGTAAAGTTTTTGCCAGTG BQ167076Ld09P081A05P081A111R1_07 CAGCTCTGAGGTGATTCGACGGGGCCTTTGGAACTTCTACAGGTAAAGTTTTTGCCAGTG BQ167076Ld10P081A05P081A111R1_07 ---CTCTGAGGTGATTCGACGGGGCCTTTGGAACTTCTACAGGTAAAGTTTTTGCCAGTG BQ167076Ld11P081A05P081A111R1_07 -----------------GACGGGGCCTTTGGAACTTCTACAGGTAAAGTTTTTGCCAGTG BQ167076As01P081A05P081A111R1_07 -----------------GACGGGGCCTTTGGAACTTCTACAGGTAAAGTTTTTGCCAGTG BQ167076As02P081A05P081A111R1_07 -----------------GACGGGGCCTTTGGAACTTCTACAGGTAAAGTTTTTGCCAGTG BQ167076At01P081A05P081A111R1_07 ----------------------GGCCTTTGGAACTTCTACAGGTAAAGTTTTTGCCAGTG BQ167076At02P081A05P081A111R1_07 -----------------GACGGGGCCTTTGGAACTTCTACAGGTAAAGTTTTTGCCAGTG BQ167076Ld07P081A05P081A111R1_04 AGTCGTA-----------------------------------------TTACAAT----- BQ167076Ld08P081A05P081A111R1_04 ----CCATATGGGAGAGCTCCCAACGCGTTGGATGCAT-AGCTTGAGTATTCTATAG--- BQ167076Tu01P081A05P081A111R1_08 AATCCTAAGTCTTAAATTTTTCATTGTGAGGGATATACAAGCCTGAATTTACACTAAAAG BQ167076Tu02P081A05P081A111R1_07 AATCCTAAGTCTTAAATTTTTCATTGTGAGGGATATACAAGCCTGAATTTACACTAAAAG BQ167076Ld09P081A05P081A111R1_07 AATCCTAAGTCTTGAATTTTTCATTGTGATGGATATACAAGCCTGAATTTACACTAAAAG BQ167076Ld10P081A05P081A111R1_07 AATCCTAAGTCTTGAATTTTTCATTGTGATGGATATACAAGCCTGAATTTACACTAAAAG BQ167076Ld11P081A05P081A111R1_07 AATCCTAAGTCTTGAATTTTTCATTGTGATGGATATACAAGCCTGAATTTACACTAAAAG BQ167076As01P081A05P081A111R1_07 AATCCTAAGTCTTGAATTTTTCATTGTGATGGATATACAAGCCTGAATTTACACTAAAAG BQ167076As02P081A05P081A111R1_07 AATCCTAAGTCTTGAATTTTTCATTGTGATGGATATACAAGCCTGAATTTACACTAAAAG BQ167076At01P081A05P081A111R1_07 AATCCTAAGTCTTGAATTTTTCATTGTGATGGATATACAAGCCTGAATTTACACTAAAAG BQ167076At02P081A05P081A111R1_07 AATCCTAAGTCTTGAATTTTTCATTGTGATGGATATACAAGCCTGAATTTACACTAAAAG * * * * BQ167076Ld07P081A05P081A111R1_04 ------------------------------------------------------------ BQ167076Ld08P081A05P081A111R1_04 --------------------TGT----------------CACCTAAATAGCTTGGCGTAA BQ167076Tu01P081A05P081A111R1_08 AACATTATGAAAAACTTCTATGTCAGGCTGGAGAACGAACACCTAAACAATGCAGGGAAG BQ167076Tu02P081A05P081A111R1_07 AACATTATGAAAAACTTCTATGTCAGGCTGGAGAACGAACACCTAAACAATGCAGGGAAG BQ167076Ld09P081A05P081A111R1_07 AACATTACCAAAAACTTCTCTGTCAGGCTGGAGAACGAACACCTAAACAATGCAGGGAAG BQ167076Ld10P081A05P081A111R1_07 AACATTACCAAAAACTTCTCTGTCAGGCTGGAGAACGAACACCTAAACAATGCAGGGAAG BQ167076Ld11P081A05P081A111R1_07 AACATTACCAAAAACTTCTCTGTCAGGCTGGAGAACGAACACCTAAACAATGCAGGGAAG BQ167076As01P081A05P081A111R1_07 AATATTACCAAAAACTTCTCTGTCAGGCTGGAGAACGAACACCTAAACAATGCAGGGAAG BQ167076As02P081A05P081A111R1_07 AATATTACCAAAAACTTCTCTGTCAGGCTGGAGAACGAACACCTAAACAATGCAGGGAAG BQ167076At01P081A05P081A111R1_07 AACATTATGAATAACTTCTCTGTCAGGCTGGAGAACGAACACCTAAACAATGCAGGGAAG BQ167076At02P081A05P081A111R1_07 AACATTATGAATAACTTCTCTGTCAGGCTGGAGAACGAACACCTAAACAATGCAGGGAAG BQ167076Ld07P081A05P081A111R1_04 ------TCAC-----TGGCCGTCGTT---------TTACATGGAAACAGGGATGAC---- BQ167076Ld08P081A05P081A111R1_04 TCATGGTCATAGCTGT--------TTCC-------------------------------- BQ167076Tu01P081A05P081A111R1_08 T-----TCAGAGCTGTGAAGGTTGTTCCACTTCCTTTTCATGAAGTCGAAGAGGACTAAC BQ167076Tu02P081A05P081A111R1_07 T-----TCAGAGCTGTGAAGGTTGTTCCACTTCCTTTTCATGAAGTCGAAGAGGACTAAC BQ167076Ld09P081A05P081A111R1_07 T-----TCAGAGCTGTGAAGGTTGTTCCACTTCCTTTTCATGAAGTCGAAGAGGACTAAC BQ167076Ld10P081A05P081A111R1_07 T-----TCAGAGCTGTGAAGGTTGTTCCACTTCCTTTTCATGAAGTCGAAGAGGACTAAC BQ167076Ld11P081A05P081A111R1_07 T-----TCAGAGCTGTGAAGGTTGTTCCACTTCCTTTTCATGAAGTCGAAGAGGACTAAC BQ167076As01P081A05P081A111R1_07 T-----TCAGAGCTGTGAAGGTTGTTCCACTTCCTTTTCATGAAGTCGAAGAGGACTAAC BQ167076As02P081A05P081A111R1_07 T-----TCAGAGCTGTGAAGGTTGTTCCACTTCCTTTTCATGAAGTCGAAGAGGACTAAC BQ167076At01P081A05P081A111R1_07 T-----TCAGAGCTGTGAAGGTTGTTCCACTTCCTTTTCATGAAGTCGAAGAGAACTAAC BQ167076At02P081A05P081A111R1_07 T-----TCAGAGCTGTGAAGGTTGTTCCACTTCCTTTTCATGAAGTCGAAGAGAACTAAC *** * ** BQ167076Ld07P081A05P081A111R1_04 ---------CATGATTACGG---------------------------------------- BQ167076Ld08P081A05P081A111R1_04 ------------------------------------------------------------ BQ167076Tu01P081A05P081A111R1_08 AGCATGGGGCGTCATTGCAGCACGCTCTAGGATTGCAAAACTCCCAAACAGTTCAGATGT BQ167076Tu02P081A05P081A111R1_07 AGCATGGGGCGTCATTGCAGCACGCTCTAGGATTGCAAAACTCCCAAACAGTTCAGATGT BQ167076Ld09P081A05P081A111R1_07 AGCATGAGGCGTCATTGCAGCACGCTCTAGGATTGCAGAACTCCCAAACAGTTCAGATGT BQ167076Ld10P081A05P081A111R1_07 AGCATGAGGCGTCATTGCAGCACGCTCTAGGATTGCAGAACTCCCAAACAGTTCAGATGT BQ167076Ld11P081A05P081A111R1_07 AGCATGAGGCGTCATTGCAGCACGCTCTAGGATTGCAGAACTCCCAAACAGTTCAGATGT BQ167076As01P081A05P081A111R1_07 AGCATGAGGCGTCATTGCAGCACGCTCTAGGATTGCAGAACTCCCAAACAGTTCAGATGT BQ167076As02P081A05P081A111R1_07 AGCATGAGGCGTCATTGCAGCACGCTCTAGGATTGCAGAACTCCCAAACAGTTCAGATGT BQ167076At01P081A05P081A111R1_07 AGCATGGGGCGTCATTGCAGCACGCTCTAGGATTGCAGAACTCCCAAACAGTTCAGATGT BQ167076At02P081A05P081A111R1_07 AGCATGGGGCGTCATTGCAGCACGCTCTAGGATTGCAGAACTCCCAAACAGTTCAGATGT BQ167076Ld07P081A05P081A111R1_04 ----------------------------------------------ATTCACTGGCCGTC BQ167076Ld08P081A05P081A111R1_04 ------------------------------------------------------------ BQ167076Tu01P081A05P081A111R1_08 AACACCAACTAATGTTAGAAAGCATGCACTACACTACTATAATTCAATTCATTTTTTGGT BQ167076Tu02P081A05P081A111R1_07 AACACCAACTAATGTTAGAAAGCATGCACTACACTACTATAATTCAATTCATTTTTTGGT BQ167076Ld09P081A05P081A111R1_07 AACACCAACTAATGTTAGAAAGCATGCACTACACTACTATAATTCAATTCATTTTTTGGT BQ167076Ld10P081A05P081A111R1_07 AACACCAACTAATGTTAGAAAGCATGCACTACACTACTATAATTCAATTCATTTTTTGGT BQ167076Ld11P081A05P081A111R1_07 AACACCAACTAATGTTAGAAAGCATGCACTACACTACTATAATTCAATTCATTTTTTGGT BQ167076As01P081A05P081A111R1_07 AACACCAACTAATGTTAGAAAGCATGCACTACACTACTATAATTCAATTCATTTTTTGGT BQ167076As02P081A05P081A111R1_07 AACACCAACTAATGTTAGAAAGCATGCACTACACTACTATAATTCAATTCATTTTTTGGT BQ167076At01P081A05P081A111R1_07 AACACCAACTAATGTTAGAAAGCATGCACTACACTACTACAATTCAATTCATTTTTTGGT BQ167076At02P081A05P081A111R1_07 AACACCAACTAATGTTAGAAAGCATGCACTACACTACTATAATTCAATTCATTTTTTGGT BQ167076Ld07P081A05P081A111R1_04 GTTTTACATGG------------------------------------------------- BQ167076Ld08P081A05P081A111R1_04 ------------------------------------------------------------ BQ167076Tu01P081A05P081A111R1_08 GTGACAAATAAAGCG--------------------------------------------- BQ167076Tu02P081A05P081A111R1_07 GTGACAAATAAAGCG--------------------------------------------- BQ167076Ld09P081A05P081A111R1_07 GTGACAAATAAAGCGCAATC----GAATTCCCGCGGCCGCCATGGCGGCCGGGAGCATGC BQ167076Ld10P081A05P081A111R1_07 GTGACAAATAAAGCGCAATC----GAATTCCCGCGGCCGCCATGGCGGCCGGGAGCATGC BQ167076Ld11P081A05P081A111R1_07 GTGACAAATAAAGCGCAATCACTAGTGAATTCGCGGCCGCCTGCAGGTC---GACCATAT BQ167076As01P081A05P081A111R1_07 GTGACAAATAAAGCGCA------------------------------------------- BQ167076As02P081A05P081A111R1_07 GTGACAAATAAAGCGCA------------------------------------------- BQ167076At01P081A05P081A111R1_07 GTGAC------------------------------------------------------- BQ167076At02P081A05P081A111R1_07 GTGACAAATAAAGCGCA------------------------------------------- BQ167076Ld07P081A05P081A111R1_04 ------------------------------------------------------------ BQ167076Ld08P081A05P081A111R1_04 ------------------------------------------------------------ BQ167076Tu01P081A05P081A111R1_08 ------------------------------------------------------------ BQ167076Tu02P081A05P081A111R1_07 ------------------------------------------------------------ BQ167076Ld09P081A05P081A111R1_07 GACGTCGGGCCCAATTCGCCCTATAGTGAGTCGTATTACAATTCACT------------- BQ167076Ld10P081A05P081A111R1_07 GACGTCGGGCCCAATTCGCCCTATAGTGAGTCGTATTACAATTCACTGGCC--------- BQ167076Ld11P081A05P081A111R1_07 GGGAGAGCTCCCAACGCGTTGGATGCATAGCTTGAGTATTCTATAGTGTCACCTAAATAG BQ167076As01P081A05P081A111R1_07 ------------------------------------------------------------ BQ167076As02P081A05P081A111R1_07 ------------------------------------------------------------ BQ167076At01P081A05P081A111R1_07 ------------------------------------------------------------ BQ167076At02P081A05P081A111R1_07 ------------------------------------------------------------ BQ167076Ld07P081A05P081A111R1_04 ---------------- BQ167076Ld08P081A05P081A111R1_04 ---------------- BQ167076Tu01P081A05P081A111R1_08 ---------------- BQ167076Tu02P081A05P081A111R1_07 ---------------- BQ167076Ld09P081A05P081A111R1_07 ---------------- BQ167076Ld10P081A05P081A111R1_07 ---------------- BQ167076Ld11P081A05P081A111R1_07 CTTGGCGTAATCATGG BQ167076As01P081A05P081A111R1_07 ---------------- BQ167076As02P081A05P081A111R1_07 ---------------- BQ167076At01P081A05P081A111R1_07 ---------------- BQ167076At02P081A05P081A111R1_07 ----------------