MUSCLE (3.6) multiple sequence alignment BQ169729Ld04P081F05P081F111R1_04 ------------------------------------------------------------ BQ169729Ld03P081F05P081F111R1_04 ------------------------------------------------------------ BQ169729Ld11P081F05P081F111R1_08 -----TCGATTCCCATTAAAGCTTGGAAAACAGCCTCTTCA-TGGATCAGGGAAGACGGT BQ169729Ld08P081F05P081F111R1_09 ---------ATTCCCATTAAGCTTGGAAAACAGCCTCTTCA-TGGATCAGGGAAGACAGT BQ169729Ld12P081F05P081F111R1_08 --------GATTCCCATTAAGCTTGGAAAACAGCCTCTTCA-TGGATCAGGGAAGACAGT BQ169729Ld09P081F05P081F111R1_09 -------------------AGCTTGGAAAACAGCCTCTTCA-TGGATCAGGGAAGATGGT BQ169729Ld01P081F05P081F111R1_03 -----TCGATTCCCATTAAAGCTTGGAAAACAGCCTCTTCA-TGGATCAGGGAAGACGGT BQ169729Ld07P081F05P081F111R1_09 ---------------------CTTGGAAAACAGCCTCTTCA-TGGATCAGGGAAGACGGT BQ169729Ld10P081F05P081F111R1_08 --------------------TCTCCGA------CATCTTGG-TTGATA----AATTGTTT BQ169729As01P081F05P081F111R1_05 ---------------TCCTCCTCCCGATCGGTACGCCTCTGATCGACACTTGATGTGTGA BQ169729As02P081F05P081F111R1_05 --------------------CGCCCGATCGGT-CGCCTCTG-TCGACACTTGATATGTGA BQ169729Tu02P081F05P081F111R1_05 ----------------------------ATCTTCGCCTTTG-TTGACACTTGATATGTGA BQ169729Ld02P081F05P081F111R1_03 ----------------------------------GCCTTTG-TTGACC-TTGATATGTGC BQ169729Tu01P081F05P081F111R1_05 ----------------------------------GCCTTTG-TTGACACTTGATATGTGA BQ169729At02P081F05P081F111R1_04 -----GCTCGTTTGATCCT-CACCCGATCGATACGCCTTTG-TTAACAC----------- BQ169729At01P081F05P081F111R1_05 GACCCGCTCCTTTGATCATCCGCCAGATCGATACGCCTTTG------------------- BQ169729Ld04P081F05P081F111R1_04 ------------------------------------------------------------ BQ169729Ld03P081F05P081F111R1_04 ------------------------------------------------------------ BQ169729Ld11P081F05P081F111R1_08 TCAATATCAGGAGCATAAGTATGCTTACGGATTGGAGG---------------AATCAGA BQ169729Ld08P081F05P081F111R1_09 TCAATATCAGGAGCATAAGTGTGCTTATGGATTGGAGG---------------GATCAGA BQ169729Ld12P081F05P081F111R1_08 TCAATATCAGGAGCATAAGTGTGCTTATGGATTGGAGG---------------GATCAGA BQ169729Ld09P081F05P081F111R1_09 TCAATATCAGGGGCGTAAGTGTGCTTACGGATTGGAGG---------------AATCAGA BQ169729Ld01P081F05P081F111R1_03 TCAATATCAGGGGCGTAAGTGTGCTTACGGATTGGAGG---------------AATCAGA BQ169729Ld07P081F05P081F111R1_09 TCAATATCAGGGGCGTAAGTGTGCTTACGGATTGGAGG---------------AATCAGA BQ169729Ld10P081F05P081F111R1_08 TTTTTGTATGTGGCGTGATCGTGCTTGCGTGC-----ATAGATTTCAAGTACAATCAGGA BQ169729As01P081F05P081F111R1_05 ATAATATGTGATGCTTG-------TGACGGATTGATGGTAGATTTCAAGT-CAAGGCGGA BQ169729As02P081F05P081F111R1_05 ATAATATGTGATGCGTG-------TGACGGATTGATGGTAGATTTCAAGTACAAGGCGGA BQ169729Tu02P081F05P081F111R1_05 ATAATATGTGATGCGTG-------TGATGGATTGATGGTAGATTTCAAGTACCAGGCGGA BQ169729Ld02P081F05P081F111R1_03 ATAATATGTGATGCGTG-------TGATGGATTGATGGTAGATTTCAAGTACAAGGCGGA BQ169729Tu01P081F05P081F111R1_05 ATAATATGTGATGCGTG-------TGATGGATTGATGGTAGATTTCAAGTACAAGGCGGA BQ169729At02P081F05P081F111R1_04 ---GTACGTAATGCATG-------TGATGGATCGACGGTAGATTTCAAGTACAACGCGGA BQ169729At01P081F05P081F111R1_05 TTAACACGTCATGTATG-------TGATGGATTGGTGGTAGATTTCAAGTACAAGGCGGA BQ169729Ld04P081F05P081F111R1_04 ------------------------------------------------------------ BQ169729Ld03P081F05P081F111R1_04 ------------------------------------------------------------ BQ169729Ld11P081F05P081F111R1_08 TTCTCCGCTTCAAGAGTTGGGGCAGGCACTCG-CTTGTTCTGATCGTTGTATTGCGCTTG BQ169729Ld08P081F05P081F111R1_09 TTTTCCGCTTCAACAGTTGGGGCAGGCACTCG-CTTGTTTTGATCATTATATTGCGCTTG BQ169729Ld12P081F05P081F111R1_08 TTTTCCGCTTCAACAGTTGGGGCAGGCACTCGNCGTGTTTTGATCATTATATTGCGCTTG BQ169729Ld09P081F05P081F111R1_09 TTCTCCGCTTCAACAGTTGGGGCAGGCACTCG-CTTGTTTTGATTATTTTATTGCGCTTG BQ169729Ld01P081F05P081F111R1_03 TTCTCCACTTCAACAGTTGGGGCAGGCACTCG-CTTGTTTTGGTTATTATATTGCGCTTG BQ169729Ld07P081F05P081F111R1_09 TTCTCCGCTTCAACAGTTGGGGCAGGCATTCG-CTTGTTTTGGTTATTATATTGCGCTTG BQ169729Ld10P081F05P081F111R1_08 CTCGGTGATGGTGGTGACGGAGGAGGGGTACAACAAGTGCGAGTCG-------------- BQ169729As01P081F05P081F111R1_05 CTCTGTGATGGAGGTGACGCAGGACGAGTACTACTAGTGCCGGTCG-------------- BQ169729As02P081F05P081F111R1_05 CTCGGTGATGGAGGTGACGCAGGAGGAGTACGACAAGTGCGGGTCG-------------- BQ169729Tu02P081F05P081F111R1_05 CTCGGTGATGGAGGTGACGCAGGAGGAGTACGACAAGTGCGGGTCG-------------- BQ169729Ld02P081F05P081F111R1_03 CTCGGTGATGGAGGTGACGCAGGAGGAGTACGACAAGTGCGGGTCG-------------- BQ169729Tu01P081F05P081F111R1_05 CTCGGTGATGGAGGTGACGCAGGAGGAGTACGACAAGTGCGGGTCG-------------- BQ169729At02P081F05P081F111R1_04 CTCGGTGATGGAGGTGACGCATGAGGAGTACGACAAGTGCGGGTCG-------------- BQ169729At01P081F05P081F111R1_05 CTCGGTGATGGAGGTGACGCAGGAGGAGTACGACAAGTGCGGGTCG-------------- BQ169729Ld04P081F05P081F111R1_04 -------------------------------CGGC------------CGCCGCAGTCG-- BQ169729Ld03P081F05P081F111R1_04 ------------------------------------------------------------ BQ169729Ld11P081F05P081F111R1_08 ATAATGCGTCAAATCTGCCTCTTCAGCTAATTGGCAAGCCAGAGG-GCGC----ACTGCA BQ169729Ld08P081F05P081F111R1_09 ATAATGCGTCAAATCTGCCTCTTCAGCTAGCTGGCAAGCCAGAGG-GCGC----ACTGCA BQ169729Ld12P081F05P081F111R1_08 ATAATGCGTCAAATCTGCCTCTTCAGCTAGCTGGCAAGCCAGAGG-GCGC----ACTGCA BQ169729Ld09P081F05P081F111R1_09 ATAGTGCATCAAATCTGCCTCTTCAGCTAGCTGGCAAGCCAGAGG-GCGC----ACTGCA BQ169729Ld01P081F05P081F111R1_03 ATAATGCGTCAAATCTGCCTCTTCAGCTAGCTGGCAAGCCAGAGG-GCGC----ACTGCA BQ169729Ld07P081F05P081F111R1_09 ATAATGCGTCAAATCTGCCTCTTCAGCTAGCTGGCAAGCCAGAGG-GCGC----ACTGCA BQ169729Ld10P081F05P081F111R1_08 ---TCGGACCCGATCTTCTTCTCCAACAA--CGGCAACACCGAGGTGCGCCTCGACCGCC BQ169729As01P081F05P081F111R1_05 ---ACGCTCCCCATCTTCTTCTCCAACAA--CGGCGACACCGAGGTGCGCCTGGACCGCC BQ169729As02P081F05P081F111R1_05 ---ACGCACCCCATCTTCTTCTCCAACAA--CGGCGACACCGAGGTGCGCCTGGACCGCC BQ169729Tu02P081F05P081F111R1_05 ---ACGCACCCCATCTTCTTCTCCAACAA--CGGCGACACCGAGGTGCGCCTGGACCGCC BQ169729Ld02P081F05P081F111R1_03 ---ACGCACCCCATCTTCTTCTCCAACAA--CGGCGACACCGAGGTGCGCCTGGACCGCC BQ169729Tu01P081F05P081F111R1_05 ---ACGCACCCCATCTTCTTCTCCAACAA--CGGCGACACCGAGGTGCGCCTGGACCGCC BQ169729At02P081F05P081F111R1_04 ---ACGCACCCCATCTTCTTCTCCAACAA--CGGCGACACCGAGGTGCGCCTGGACCGCC BQ169729At01P081F05P081F111R1_05 ---ACGCACCCCATCTTCTTCTCCAACAA--CGGCGACACCGAGGTGCGCCTGGACCGCC BQ169729Ld04P081F05P081F111R1_04 ------------------------------------------------------------ BQ169729Ld03P081F05P081F111R1_04 -------------------------------------------CGGCCGCCTGCAGGTC- BQ169729Ld11P081F05P081F111R1_08 CGG-----------TTTATGGAGGATAATCACTAGTGAATTCGCGGCCGCCTGCAGGTC- BQ169729Ld08P081F05P081F111R1_09 CGG-----------TTTATGGAGGATAATCACTATTGAATTCGCGGCCGCCTGCAGGTC- BQ169729Ld12P081F05P081F111R1_08 CGG-----------TTTATGGAGGATAATCACTATTGAATTCGCGGCCGCCTGCAGGTC- BQ169729Ld09P081F05P081F111R1_09 CGG-----------TTTATGGAGGATAATCACTAGTGAATTCGCGGCCGCCTGCAGGTC- BQ169729Ld01P081F05P081F111R1_03 CGG-----------TTTATGGAGGATAATCACTAGTGAATTCGCGGCCGCCTGCAGGTC- BQ169729Ld07P081F05P081F111R1_09 CGG-----------TTTATGGAGGATAATCACTAGTGAATTCGCGGCCGCCTGCAGGTC- BQ169729Ld10P081F05P081F111R1_08 CCGGCCCCTTCTACTTCATCAGCGGCAATC----GAATTCCCGCGGCCGCCATGGCGGCC BQ169729As01P081F05P081F111R1_05 CGGGCCCCTTCTACTTCATCAGCGGCAG-------------------------------- BQ169729As02P081F05P081F111R1_05 CGGGCCCCTTCTACTTCATCAGCGG----------------------------------- BQ169729Tu02P081F05P081F111R1_05 CGGGCCCCTTCTACTTCATCAGCG------------------------------------ BQ169729Ld02P081F05P081F111R1_03 CGGGCCCCTTCTACTTCATCAGCGGCAATCACTAGTGAATTCGCGGCCGCCTGCAGGTC- BQ169729Tu01P081F05P081F111R1_05 CGGGCCCCTTCTACTTCATCAGCGGCA--------------------------------- BQ169729At02P081F05P081F111R1_04 CGGGCCCCTTCTACTTCATCAGCGGC---------------------------------- BQ169729At01P081F05P081F111R1_05 CGGGCCCCTTCTACTTCATCAGCG------------------------------------ BQ169729Ld04P081F05P081F111R1_04 ----ACATATGGGAGAGCTCCCAACGCGTTGGATGCATAGCTTGAGTATTCTATAGTGTC BQ169729Ld03P081F05P081F111R1_04 --GACCATATGGGAGAGCTCCCAACGCGTTGGATGCATAGCTTGAGTATTCTATAGTGTC BQ169729Ld11P081F05P081F111R1_08 --GACCATATGGGAGAGCTCCCAACGCGTTGGATGCATAGCTTGAGTATTCTATAGTG-- BQ169729Ld08P081F05P081F111R1_09 --AACCATATGGGAGAGCTCCCAACGCGTTGGATGCATAGCTTGAGTATTCTATAGTGTC BQ169729Ld12P081F05P081F111R1_08 --AACCATATGGGAGAGCTCCCAACGCGTTGGATGCATAGCTTGAGTATTCTATAGTGTC BQ169729Ld09P081F05P081F111R1_09 --GACCATATGGGAGAGCTCCCAACGCGTTGGATGCATAGCTAGAGTATTCTATA----- BQ169729Ld01P081F05P081F111R1_03 --GACCATATGGGAGAGCTCCCAACGCGTTGGATGCATAGCTTGAGTATTCTATAGTGTC BQ169729Ld07P081F05P081F111R1_09 --GACCATATGGGAGAGCTCCCAACGCGTTGGATGCATAGCTTGAGTATTCTATAGTGTC BQ169729Ld10P081F05P081F111R1_08 GGGAGCATGCGACGTCGGGCCCAATTCGCCCTATAGTGAGTCGTATTACAATTCACTGGC BQ169729As01P081F05P081F111R1_05 ------------------------------------------------------------ BQ169729As02P081F05P081F111R1_05 ------------------------------------------------------------ BQ169729Tu02P081F05P081F111R1_05 ------------------------------------------------------------ BQ169729Ld02P081F05P081F111R1_03 --GACCATATGGGAGAGCTCCCAACGCGTTGGATGCATAGCTTGAGTATTCTATAGTGTC BQ169729Tu01P081F05P081F111R1_05 ------------------------------------------------------------ BQ169729At02P081F05P081F111R1_04 ------------------------------------------------------------ BQ169729At01P081F05P081F111R1_05 ------------------------------------------------------------ BQ169729Ld04P081F05P081F111R1_04 ACCTAAATAGCTTGGCGTAATCATGGTCATAGCTGTTTC BQ169729Ld03P081F05P081F111R1_04 ACCTAAATAGCTTGGCGTAATCATGGTCATAGCTGTTT- BQ169729Ld11P081F05P081F111R1_08 --------------------------------------- BQ169729Ld08P081F05P081F111R1_09 A-------------------------------------- BQ169729Ld12P081F05P081F111R1_08 A-------------------------------------- BQ169729Ld09P081F05P081F111R1_09 --------------------------------------- BQ169729Ld01P081F05P081F111R1_03 ACCTAAATAGATTGGCGTAATCATGG------------- BQ169729Ld07P081F05P081F111R1_09 ACCTAAAT------------------------------- BQ169729Ld10P081F05P081F111R1_08 CGTCCGTTTTA---------------------------- BQ169729As01P081F05P081F111R1_05 --------------------------------------- BQ169729As02P081F05P081F111R1_05 --------------------------------------- BQ169729Tu02P081F05P081F111R1_05 --------------------------------------- BQ169729Ld02P081F05P081F111R1_03 ACCTAAATAGCTTGGCGTAATCATG-------------- BQ169729Tu01P081F05P081F111R1_05 --------------------------------------- BQ169729At02P081F05P081F111R1_04 --------------------------------------- BQ169729At01P081F05P081F111R1_05 ---------------------------------------