MUSCLE (3.6) multiple sequence alignment BQ487514At01P081B06P081B121F1_08 --CCTTTCTCCTTGGGTTCACAGCAGCGCTCATGAATGGGTAGGCAGCCCAGGAGCTCCA BQ487514At02P081B06P081B121F1_07 AGCCTTTCTCCTTGGGTTC-CAGCAGCGCTCATGAATGGGTAGGCAGCCCAGGAGCTCCA BQ487514Tu01P081B06P081B121F1_07 AGCCTTTCTCCTTGGGTTCACAGCAGCGCTCATGAATGGGTAGGCAGCCCAGGAGCTCCA BQ487514Ld05P081B06P081B121F1_07 AGCCTTTCTCCTTGGGTTCACAGCAGCGCTCATGAATGGGTAGGCAGCCCAGGAGCTCCA BQ487514Tu02P081B06P081B121F1_06 AGCCTTTCTCCTTGGGTTC-CAGCAGCGCTCATGAATGGGTAGGCAGCCCAGGAGCTCCA BQ487514Ld01P081B06P081B121F1_05 AGCCTTTCTCCTTGGGTTC-CAGCAGCGCTCATGAATGGGTAGGCAGCCCAGGAGCTCCA BQ487514Ld07P081B06P081B121F1_07 AGCCTTTCTCCTTGGGTTC-CAGCAGCGCTCATGAATGGGTAGGCAGCCCAGGAGCTCCA BQ487514Ld08P081B06P081B121F1_07 -GCCTTTCTCCTTGGGTTCACAGCAGCGCTCATGAATGGGTAGGCAGCCCAGGAGCTCCA BQ487514As01P081B06P081B121F1_06 AGCCTTTCTCCTTGGGTTCACAGCAGCACTCATGAATGGGTAGGCAGCCCAGGAGCTCCA BQ487514As02P081B06P081B121F1_06 AGCCTTTCT-CTTGGGTTCACAGCAGCACTCATGAATGGGTAGGCAGCCCAGGAGCTCCA BQ487514Ld02P081B06P081B121F1_05 AGCCTTTC-CCTTGGGTTC-CAGCAGCGCTCATGAATGGGTAGGCAGCCCAGGAGCTCCA BQ487514Ld04P081B06P081B121F1_07 AGCCTTTCTCCTTGGGTTCACAGCAGCGCTCATGAATGGGTAGGCAGCCCAGGAGCTCCA BQ487514Ld12P081B06P081B121F1_08 AGCCTTTCTCCTTGGGTTCACAGCAGCGCTCATGAATGGGTAGGCAGCCCAGGAGCTCCA BQ487514Ld03P081B06P081B121F1_05 AGCCTTTCTCCTTGGGTTCACAGCAGCGCTCATGAATGGGTAGGCAGCCCAGGAGCTCCA BQ487514Ld06P081B06P081B121F1_07 AGCCTTTCTCCTTGGGTTC-CAGCAGCGCTCATGAATGGGTAGGCAGCCCAGGAGCTCCA BQ487514Ld09P081B06P081B121F1_06 AGCCTTTCTCCTTGGGTTC-CAGCAGCGCTCATGAATGGGTAGGCAGCCCAGGAGCTCCA BQ487514Ld10P081B06P081B121F1_06 --CCTTTCTCCTTGGGTTC-CAGCAGCGCTCATGAATGGGTAGGCAGCCCAGGAGCTCCA ****** ********* ******* ******************************** BQ487514At01P081B06P081B121F1_08 CGCCAGTGTGACTGTCACGACGATGATCTTTAGTATGACATTGTCCTTCAGCAAGCAAAT BQ487514At02P081B06P081B121F1_07 CGCCAGTGTGACTGTCACGACGATGATCTTTAGTATGACATTGTCCTTCAGCAAGCAAAT BQ487514Tu01P081B06P081B121F1_07 CGCCAGTGTGACTGTCACCACGATGATCTTTAGTATGACATTGTCCTTCAGCAAGCAAAT BQ487514Ld05P081B06P081B121F1_07 CGCCAGTGTGACTGTCACCACGATGATCTTTAGTATGACATTGTCCTTCAGCAAGCAAAT BQ487514Tu02P081B06P081B121F1_06 CGCCAGTGTGACTGTCACCACGATGATCTTTAGTATGACATTGTCCTTCAGCAAGCAAAT BQ487514Ld01P081B06P081B121F1_05 CGCCAGTGTGACTGTCACCACGATGATCTTTAGTATGACATTGTCCTTCAGCAAGCAAAT BQ487514Ld07P081B06P081B121F1_07 CGCCAGTGTGACTGTCACGACGATGATCTTTAGTATGACATTGTCCTTCAGCAAGCAAAT BQ487514Ld08P081B06P081B121F1_07 CGCCAGTGTGACTGTCACGACGATGATCTTTAGTATGACATTGTCCTTCAGCAAGCAAAT BQ487514As01P081B06P081B121F1_06 CGCCAGTGTGACTGTCACGACAATGATCTTTAGTATGACATTGTCCTTCAGCAAGCAAAT BQ487514As02P081B06P081B121F1_06 CGCCAGTGTGACTGTCACGACAATGATCTTTAGTATGACATTGTCCTTCAGCAAGCAAAT BQ487514Ld02P081B06P081B121F1_05 CGCCAGTGTGACTGTCACCACGATGATCTTTAGTATGACATTGTCCTTCAGCAAGCAAAA BQ487514Ld04P081B06P081B121F1_07 CGCCAGTGTGACTGTCACGACGATGATCTTTAGTATGACATTGTCCTTCAGCAAGCAAAT BQ487514Ld12P081B06P081B121F1_08 CGCCAGTGTGACTGTCACGACGATGATCTTTAGTATGACATTGTCCTTCAGCAAGCAAAT BQ487514Ld03P081B06P081B121F1_05 CGCCAGTGTGACTGTCACGACGATGATCTTTAGTATGACATTGTCCTTCAGCAAGCAAAT BQ487514Ld06P081B06P081B121F1_07 CGCCAGTGTGACTGTCACGACGATGATCTTTAGTATGACATTGTCCTTCAGCAAGCAAAT BQ487514Ld09P081B06P081B121F1_06 CGCCAGTGTGACTGTCACGACGATGATCTTTAGTATGACATTGTCCTTCAGCAAGCAAAT BQ487514Ld10P081B06P081B121F1_06 CGCCAGTGTGACTGTCACGACGATGATCTTTAGTATGACATTGTCCTTCAGCAAGCAAAT ****************** ** ************************************* BQ487514At01P081B06P081B121F1_08 GAGGGCCCCAACATCCAGAGGAAACAAACAATAGCCAAGGAGACTGAGGCTTTGGAAGAA BQ487514At02P081B06P081B121F1_07 GAGGGCCCCAACATCCAGAGGAAACAAACAATAGCCAAGGAGACTGAGGCTTTGGAAGAA BQ487514Tu01P081B06P081B121F1_07 TAGGGCTCCAACATCCAGAGGAAACAAACAATAGCCAAGGAGACTGAGACTTTGGAAGAA BQ487514Ld05P081B06P081B121F1_07 TAGGGCTCCAACATCCAGAGGAAACAAACAATAGCCAAGGAGACTGAGACTTTGGAAGAA BQ487514Tu02P081B06P081B121F1_06 TAGGGCTCCAACATCCAGAGGAAACAAACAATAGCCAAGGAGACTGAGACTTTGGAAGAA BQ487514Ld01P081B06P081B121F1_05 TAGGGCTCCAACATCCAGAGGAAACAAACAATAGCCAAGGAGACTGAGACTTTGGAAGAA BQ487514Ld07P081B06P081B121F1_07 TAGGGCTCCAACATCCAGAGGAAACAAACAATAGCCAAGGAGACTGAGGCTTTGGAAGAA BQ487514Ld08P081B06P081B121F1_07 TAGGGCTCCAACATCCAGAGGAAACAAACAATAGCCAAGGAGACTGAGGCTTTGGAAGAA BQ487514As01P081B06P081B121F1_06 TAGGGCTCCAACATCCAGAGGAAACAAACAATAGCCAAGGAGACTGAGGCTTTGGAAGAA BQ487514As02P081B06P081B121F1_06 TAGGGCTCCAACATCCAGAGGAAACAAACAATAGCCAAGGAGACTGAGGCTTTGGAAGAA BQ487514Ld02P081B06P081B121F1_05 TAGGGCTCCAACATCCAGAGGAAACAAACAATAGCCAAGGAGACTGAGACTTTGGAAGAA BQ487514Ld04P081B06P081B121F1_07 TAGGGCTCCAACATCCAGAGGAAACAAACAATAGCCAAGGAGACTGAGGCTTTGGAAGAA BQ487514Ld12P081B06P081B121F1_08 TAGGGCTCCAACATCCAGAGGAAACAAACAATAGCCAAGGAGACTGAGGCTTTGGAAGAA BQ487514Ld03P081B06P081B121F1_05 TAGGGCTCCAACATCCAGAGGAAACAAACAATAGCCAAGGAGACTGAGGCTTTGGAAGAA BQ487514Ld06P081B06P081B121F1_07 TAGGGCTCCAACATCCAGAGGAAACAAACAATAGCCAAGGAGACTGAGGCTTTGGAAGAA BQ487514Ld09P081B06P081B121F1_06 TAGGGCTCCAACATCCAGAGGAAACAAACAATAGCCAAGGAGACTGAGGCTTTGGAAGAA BQ487514Ld10P081B06P081B121F1_06 TAGGGCTCCAACATCCAGAGGAAACAAACAATAGCCAAGGAGACTGAGGCTTTGGAAGAA ***** ***************************************** *********** BQ487514At01P081B06P081B121F1_08 GATGATGTGCCCACCCTGCAGTGAGACAGCAATAAATCACTACAAAATTCCACAGCAGGT BQ487514At02P081B06P081B121F1_07 GATGATGTGCCCACCCTGCAGTGAGACAGCAATAAATCACTACAAAATTCCACAGCAGGT BQ487514Tu01P081B06P081B121F1_07 GATGATGTGCCCACCCTGCAGGGAGACAGCAACAACTCGTTACAAAATTCCACAGCAGGT BQ487514Ld05P081B06P081B121F1_07 GATGATGTGCCCACCCTGCAGGGAGACAGCAACAACTCGTTACAAAATTCCACAGCAGGT BQ487514Tu02P081B06P081B121F1_06 GATGATGTGCCCACCCTGCAGGGAGACAGCAACAACTCGTTACAAAATTCCACAGCAGGT BQ487514Ld01P081B06P081B121F1_05 GATGATGTGCCCACCCTGCAGGGAGACAGCAACAACTCGTTACAAAATTCCACAGCAGGT BQ487514Ld07P081B06P081B121F1_07 GATGATGTGCCCACCCTGCAGGGAGACAGCAACAAATCATTCCAAAATT-CACAGTAGGT BQ487514Ld08P081B06P081B121F1_07 GATGATGTGCCCACCCTGCAGGGAGACAGCAACAAATCATTCCAAAATT-CACAGTAGGT BQ487514As01P081B06P081B121F1_06 GATGATGTGCCCACCCTGCAGGGAGACAGCAACAAATCATTCCAAAATT-CACAGTAGGT BQ487514As02P081B06P081B121F1_06 GATGATGTGCCCACCCTGCAGGGAGACAGCAACAAATCATTCCAAAATT-CACAGTAGGT BQ487514Ld02P081B06P081B121F1_05 GATGATGTGCCCACCCTGCAGGGAGACAGCAACAAATCATTCCAAAATT-CACAGTAGGT BQ487514Ld04P081B06P081B121F1_07 GATGATGTGCCCACCCTGCAGGGAGACAGCAACAAATCATTCCAAAATT-CACAGTAGGT BQ487514Ld12P081B06P081B121F1_08 GATGATGTGCCCACCCTGCAGGGAGACAGCAACAAATCATTCCAAAATT-CACAGTAGGT BQ487514Ld03P081B06P081B121F1_05 GATGATGTGCCCACCCTGCAGGGAGACAGCAACAAATCATTCCAAAATT-CACAGTAGGT BQ487514Ld06P081B06P081B121F1_07 GATGATGTGCCCACCCTGCAGGGAGACAGCAACAAATCATTCCAAAATT-CACAGTAGGT BQ487514Ld09P081B06P081B121F1_06 GATGATGTGCCCACCCTGCAGGGAGACAGCAACAAATCATTCCAAAATT-CACAGTAGGT BQ487514Ld10P081B06P081B121F1_06 GATGATGTGCCCACCCTGCAGGGAGACAGCAACAAATCATTCCAAAATT-CACAGTAGGT ********************* ********** ** ** * ******* ***** **** BQ487514At01P081B06P081B121F1_08 ATAATTAGGATCGAGCAA---GTGTGCTT--TGTGTGAGAGGCAGCGCTTACCAGAAGCA BQ487514At02P081B06P081B121F1_07 ATAATTAGGATCGAGCAA---GTGTGCTT--TGTGTGAGAGGCAGCGCTTACCAGAAGCA BQ487514Tu01P081B06P081B121F1_07 ATAGTTTGGATCAAACAA---GTGTTCTTTGTGTGTGAGAGGCATTGCTTACCAGAAGCA BQ487514Ld05P081B06P081B121F1_07 ATAGTTTGGATCAAACAA---GTGTTCTTTGTGTGTGAGAGGCATTGCTTACCAGAAGCA BQ487514Tu02P081B06P081B121F1_06 ATAGTTTGGATCAAACAA---GTGTTCTTTGTGTGTGAGAGGCATTGCTTACCAGAAGCA BQ487514Ld01P081B06P081B121F1_05 ATAGTTTGGATCAAACAA---GTGTTCTTTGTGTGTGAGAGGCATTGCTTACCAGAAGCA BQ487514Ld07P081B06P081B121F1_07 ATAGTTTGGATCAAGCAAACGACGTGCTTTGTGTGTGAGAGACAGCGCTTACCAGAAGCA BQ487514Ld08P081B06P081B121F1_07 ATAGTTTGGATCAAGCAAACGACGTGCTTTGTGTGTGAGAGACAGCGCTTACCAGAAGCA BQ487514As01P081B06P081B121F1_06 ATAGTTTGGATCAAGCAA---ACGTGCTTTGTGTGTGACAGACAGCGCTTACCAGAAGCA BQ487514As02P081B06P081B121F1_06 ATAGTTTGGATCAAGCAA---ACGTGCTTTGTGTGTGACAGACAGCGCTTACCAGAAGCA BQ487514Ld02P081B06P081B121F1_05 ATAGTTTGGATCAAGCAAACGACGTGCTTTGTGTGTGAGAGACAGCGCTTACCAGAAGCA BQ487514Ld04P081B06P081B121F1_07 ATAGTTTGGATCAAGCAAACGACGTGCTTTGTGTGTGAGAGACAGCGCTTACCAGAAGCA BQ487514Ld12P081B06P081B121F1_08 ATAGTTTGGATCAAGCAAACGACGTGCTTTGTGTGTGAGAGACAGCGCTTACCAGAAGCA BQ487514Ld03P081B06P081B121F1_05 ATAGTTTGGATCAAGCAAACGACGTGCTTTGTGTGTGAGAGACAGCGCTTACCAGAAGCA BQ487514Ld06P081B06P081B121F1_07 ATAGTTTGGATCAAGCAAACGACGTGCTTTGTGTGTGAGAGACAGCGCTTACCAGAAGCA BQ487514Ld09P081B06P081B121F1_06 ATAGTTTGGATCAAGCAAACGACGTGCTTTGTGTGTGAGAGACAGCGCTTACCAGAAGCA BQ487514Ld10P081B06P081B121F1_06 ATAGTTTGGATCAAGCAAACGACGTGCTTTGTGTGTGAGAGACAGCGCTTACCAGAAGCA *** ** ***** * *** ** *** ******* ** ** ************** BQ487514At01P081B06P081B121F1_08 GAACATTTAGAGTTAAGATTATAG------------------------------------ BQ487514At02P081B06P081B121F1_07 GAACATTTAGAGTTAAGATTATAGCCCCAGCTGC-------------------------- BQ487514Tu01P081B06P081B121F1_07 GAACATTTAGTGTTAAGATTATAGCCCCAGCTGC-------------------------- BQ487514Ld05P081B06P081B121F1_07 GAACATTTAGTGTTAAGATTATAGCCCCAGCTGCCAATCACTAGTGAATT--CGCGGCCG BQ487514Tu02P081B06P081B121F1_06 GAACATTTAGTGTTAAGATTATAG------------------------------------ BQ487514Ld01P081B06P081B121F1_05 GAACATTTAGTGTTAAGATTATAGCCCCAGCTGCCAATCACTAGTGAATT--CGCGGCCG BQ487514Ld07P081B06P081B121F1_07 GAACATTTAGTGTTAAGATTATAGCCCCAGCTGCCAATC------GAATTCCCGCGGCCG BQ487514Ld08P081B06P081B121F1_07 GAACATTTAGTGTTAAGATTATAGCCCCAGCTGCCAATC------GAATTCCCGCGGCCG BQ487514As01P081B06P081B121F1_06 GAACATTTAGTGTTAAGATTATAGCCCCAGCTGC-------------------------- BQ487514As02P081B06P081B121F1_06 GAACATTTAGTGTTAAGATTATAGCCCCAGCTGC-------------------------- BQ487514Ld02P081B06P081B121F1_05 GAACATTTAGTGTTAAGATTATAGCCCCAGCTGCCAATCACTAGTGAATT--CGCGGCCG BQ487514Ld04P081B06P081B121F1_07 GAACATTTAGTGTTAAGATTATAGCCCCAGCTGCCAATCACTAGTGAATT--CGCGGCCG BQ487514Ld12P081B06P081B121F1_08 GAACATTTAGTGTTAAGATTATAGCCCCAGCTGCCAATCACTAGTGAATT--CGCGGCCG BQ487514Ld03P081B06P081B121F1_05 GAACATTTAGTGTTAAGATTATAGCCCCAGCTGCCAATCACTAGTGAATT--CGCGGCCG BQ487514Ld06P081B06P081B121F1_07 GAACATTTAGTGTTAAGATTATAGCCCCAGCTGCCAATCACTAGTGAATT--CGCGGCCG BQ487514Ld09P081B06P081B121F1_06 GAACATTTAGTGTTAAGATTATAGCCCCAGCTGCCAATCACTAGTGAATT--CGCGGCCG BQ487514Ld10P081B06P081B121F1_06 GAACATTTAGTGTTAAGATTATAGCCCCAGCTGCCAATCACTAGTGAATT--CGCGGCCG ********** ************* BQ487514At01P081B06P081B121F1_08 ------------------------------------------------------------ BQ487514At02P081B06P081B121F1_07 ------------------------------------------------------------ BQ487514Tu01P081B06P081B121F1_07 ------------------------------------------------------------ BQ487514Ld05P081B06P081B121F1_07 CC-TGCAGGTCGACCATATGGGAGAGCTCCCAACGCGTTGGATGCATAGCTTGAGTATTC BQ487514Tu02P081B06P081B121F1_06 ------------------------------------------------------------ BQ487514Ld01P081B06P081B121F1_05 CC-TGCAGGTCGACCATATGGGAGAGCTCCCAACGCGTTGGATGCATAGCTTGAGTATTC BQ487514Ld07P081B06P081B121F1_07 CCATGGCGGCCGGGAGCATGCGA------------CGTCGGGCCCAATTC------GCCC BQ487514Ld08P081B06P081B121F1_07 CCATGGCGGCCGGGAGCATGCGA------------CGTCGGGCCCAATTC------GCCC BQ487514As01P081B06P081B121F1_06 ------------------------------------------------------------ BQ487514As02P081B06P081B121F1_06 ------------------------------------------------------------ BQ487514Ld02P081B06P081B121F1_05 CC-TGCAGGTCGACCATATGGGAGAGCTCCCAACGCGTTGGATGCATAGCTTGAGTATTC BQ487514Ld04P081B06P081B121F1_07 CC-TGCAGGTCGACCATATGGGAGAGCTCCCAACGCGTTGGATGCATAGCTTGAGTATTC BQ487514Ld12P081B06P081B121F1_08 CC-TGCAGGTCGACCATATGGGAGAGCTCCCAACGCGTTGGATGCATAGCTTGAGTATTC BQ487514Ld03P081B06P081B121F1_05 CC-TGCAGGTCGACCATATGGGAGAGCTCCCAACGCGTTGGATGCATAGCTTGAGTATTC BQ487514Ld06P081B06P081B121F1_07 CC-TGCAGGTCGACCATATGGGAGAGCTCCCAACGCGTTGGATGCATAGCTTGAGTATTC BQ487514Ld09P081B06P081B121F1_06 CC-TGCAGGTCGACCATATGGGAGAGCTCCCAACGCGTTGGATGCATAGCTTGAGTATTC BQ487514Ld10P081B06P081B121F1_06 CC-TGCAGGTCGACCATATGGGAGAGCTCCCAACGCGTTGGATGCATAGCTTGAGTATTC BQ487514At01P081B06P081B121F1_08 ---------------------------------------------------- BQ487514At02P081B06P081B121F1_07 ---------------------------------------------------- BQ487514Tu01P081B06P081B121F1_07 ---------------------------------------------------- BQ487514Ld05P081B06P081B121F1_07 TATAGTGTCACCTA----AATAGCTTGGCGTAATCATGGT------------ BQ487514Tu02P081B06P081B121F1_06 ---------------------------------------------------- BQ487514Ld01P081B06P081B121F1_05 TATAGTGTCACCTA----AATAGCTTGGCGTAATCATGGTCATAGCTGTTTC BQ487514Ld07P081B06P081B121F1_07 TATAGTGAGTCGTATTACAATTCACTGGCC---------------------- BQ487514Ld08P081B06P081B121F1_07 TATAGTGAGTCGTATTACAATTCACTGGC----------------------- BQ487514As01P081B06P081B121F1_06 ---------------------------------------------------- BQ487514As02P081B06P081B121F1_06 ---------------------------------------------------- BQ487514Ld02P081B06P081B121F1_05 TATAGTGTCACCTA----AATAGCTTGGCGTAATCATGGT------------ BQ487514Ld04P081B06P081B121F1_07 TATAGTGTCACCTA----AATAGCTCGGCGTAATCATGGT------------ BQ487514Ld12P081B06P081B121F1_08 TATAGTGTCACCTA----AATAGCTTGGCGTAATCATGGT------------ BQ487514Ld03P081B06P081B121F1_05 TATAGTGTCACCTA----AATAGCTTGGCGTAATCATGGT------------ BQ487514Ld06P081B06P081B121F1_07 TATAGTGTCACCTA----AATAGCTTGGCGTAATCATGG------------- BQ487514Ld09P081B06P081B121F1_06 TATAGTGTCACCTA----AATAGCTTGGCGTAATCATGG------------- BQ487514Ld10P081B06P081B121F1_06 TATAGTGTCACCTA----AATAGCTTGGCGTAATCATGGT------------