MUSCLE (3.6) multiple sequence alignment BQ487514At01P081B06P081B121R1_08 ----------------AGCA---CACTTGCTCGATCCTAATTATACCTGCTGTGGAATTT BQ487514At02P081B06P081B121R1_07 ----------------AGCA---CACTTGCTCGATCCTAATTATACCTGCTGTGGAATTT BQ487514Ld01P081B06P081B121R1_05 --TGCCTCTCCCACAAAGAA---CACTTGTTTGATCC-AACTATACCTGCTGCGGAATTT BQ487514Ld05P081B06P081B121R1_07 -----GCCTCTCACACACAAGAACACTTGTTTGATCC-AACTATACCTGCTGTGGAATTT BQ487514Ld11P081B06P081B121R1_06 ATGCCTCTCCACACAAAGAA---CACTTGTTTGATCC-AACTATACCTGCTGTGGAATTT BQ487514Tu02P081B06P081B121R1_06 ----------------AGAA---CACTTGTTTGATCC-AACTATACCTGCTGTGGAATTT BQ487514Tu01P081B06P081B121R1_07 ---------------AAGAA---CACTTGTTTGATCC-AACTATACCTGCTGTGGAATTT BQ487514Ld02P081B06P081B121R1_05 ------------ACAAAGCACGTCGTTTGCTTGATCC-AACTATACCTACTGTG-AATTT BQ487514Ld07P081B06P081B121R1_07 ------------ACAAAGCACGTCGTTTGCTTGATCC-AACTATACCTACTGTG-AATTT BQ487514Ld08P081B06P081B121R1_07 ------------ACAAAGCACGTCGTTTGCTTGATCC-AACTATACCTACTGTG-AATTT BQ487514As01P081B06P081B121R1_06 -----------CACAAAGCA---CGTTTGCTTGATCC-AACTATACCTACTGTG-AATTT BQ487514As02P081B06P081B121R1_06 ----------ACACAAAGCA---CGTTTGCTTGATCC-AACTATACCTACTGTG-AATTT BQ487514Ld12P081B06P081B121R1_08 -----------CACAAAGCACGTCGTTTGCTTGATCC-AACTATACCTCCTGTG-AATTT BQ487514Ld09P081B06P081B121R1_06 -----------CACAAAGCACGTCGTTTGCTTGATCC-AACTATACCTACTGTG-AATTT BQ487514Ld04P081B06P081B121R1_07 ----------ACACAAAGCACGTCGTTTGCTTGATCC-AACTATACCTACTGTG-AATTT BQ487514Ld06P081B06P081B121R1_07 ----------ACACAAAGCACGTCGTTTGCTTGATCC-AACTATACCTACTGTG-AATTT BQ487514Ld10P081B06P081B121R1_06 -----------CACAAAGCACGTCGTTTGCTTGATCC-AACTATACCTACTGTG-AATTT BQ487514Ld03P081B06P081B121R1_05 ------------ACAAAGCACGTCGTTTGCTTGATCC-AACTATACCTACTGTG-AATTT * * * *** * ***** ** ******* *** * ***** BQ487514At01P081B06P081B121R1_08 TGTAGTGATTTATTGCTGTCTCACTGCAGGGTGGGCACATCATCTTCTTCCAAAGCCTCA BQ487514At02P081B06P081B121R1_07 TGTAGTGATTTATTGCTGTCTCACTGCAGGGTGGGCACATCATCTTCTTCCAAAGCCTCA BQ487514Ld01P081B06P081B121R1_05 TGTAACGAGTTGTTGCTGTCTCCCTGCAGGGTGGGCACATCATCTTCTTCCAAAGTCTCA BQ487514Ld05P081B06P081B121R1_07 TGTAACGAGTTGTTGCTGTCTCCCTGCAGGGTGGGCACATCATCTTCTTCCAAAGTCTCA BQ487514Ld11P081B06P081B121R1_06 TGTAACGAGTTGTTGCTGTCTCCCTGCAGGGTGGGCACATCATCTTCTTCCAAAGTCTCA BQ487514Tu02P081B06P081B121R1_06 TGTAACGAGTTGTTGCTGTCTCCCTGCAGGGTGGGCACATCATCTTCTTCCAAAGTCTCA BQ487514Tu01P081B06P081B121R1_07 TGTAACGAGTTGTTGCTGTCTCCCTGCAGGGTGGGCACATCATCTTCTTCCAAAGTCTCA BQ487514Ld02P081B06P081B121R1_05 TGGAATGATTTGTTGCTGTCTCCCTGCAGGGTGGGAACATCATCTTCTTCCAAAGTCTCA BQ487514Ld07P081B06P081B121R1_07 TGGAATGATTTGTTGCTGTCTCCCTGCAGGGTGGGCACATCATCTTCTTCCAAAGCCTCA BQ487514Ld08P081B06P081B121R1_07 TGGAATGATTTGTTGCTGTCTCCCTGCAGGGTGGGCACATCATCTTCTTCCAAAGCCTCA BQ487514As01P081B06P081B121R1_06 TGGAATGATTTGTTGCTGTCTCCCTGCAGGGTGGGCACATCATCTTCTTCCAAAGCCTCA BQ487514As02P081B06P081B121R1_06 TGGAATGATTTGTTGCTGTCTCCCTGCAGGGTGGGCACATCATCTTCTTCCAAAGCCTCA BQ487514Ld12P081B06P081B121R1_08 TGGAATGATTTGTTGCTGTCTCCCTGCAGGGTGGGCACATCATCTTCTTCCAAAGCCTCA BQ487514Ld09P081B06P081B121R1_06 TGGAATGATTTGTTGCTGTCTCCCTGCAGGGCGGGCACATCATCTTCTTCCAAAGCCTCA BQ487514Ld04P081B06P081B121R1_07 TGGAATGATTTGTTGCTGTCTCCCTGCAGGGTGGGCACATCATCTTCTTCCAAAGCCTCA BQ487514Ld06P081B06P081B121R1_07 TGGAATGATTTGTTGCTGTCTCCCTGCAGGGTGGGCACATCATCTTCTTCCAAAGCCTCA BQ487514Ld10P081B06P081B121R1_06 TGGAATGATTTGTTGCTGTCTCCCTGCAGGGTGGGCACATCATCTTCTTCCAAAGCCTCA BQ487514Ld03P081B06P081B121R1_05 TGGAATGATTTGTTGCTGTCTCCCTGCAGGGTGGGCACATCATCTTCTTCCAAAGCCTCA ** * ** ** ********** ******** *** ******************* **** BQ487514At01P081B06P081B121R1_08 GTCTCCTTGGCTATTGTTTGTTTCCTCTGGATGTTGGGGCCCTCATTTGCTTGCTGAAGG BQ487514At02P081B06P081B121R1_07 GTCTCCTTGGCTATTGTTTGTTTCCTCTGGATGTTGGGGCCCTCATTTGCTTGCTGAAGG BQ487514Ld01P081B06P081B121R1_05 GTCTCCTTGGCTATTGTTTGTTTCCTCTGGATGTTGGAGCCCTAATTTGCTTGCTGAAGG BQ487514Ld05P081B06P081B121R1_07 GTCTCCTTGGCTATTGTTTGTTTCCTCTGGATGTTGGAGCCCTAATTTGCTTGCTGAAGG BQ487514Ld11P081B06P081B121R1_06 GTCTCCTTGGCTATTGTTTGTTTCCTCTGGATGTTGGAGCCCTAATTTGCTTGCTGAAGG BQ487514Tu02P081B06P081B121R1_06 GTCTCCTTGGCTATTGTTTGTTTCCTCTGGATGTTGGAGCCCTAATTTGCTTGCTGAAGG BQ487514Tu01P081B06P081B121R1_07 GTCTCCTTGGCTATTGTTTGTTTCCTCTGGATGTTGGAGCCCTAATTTGCTTGCTGAAGG BQ487514Ld02P081B06P081B121R1_05 GTCTCCTTGGCTATTGTTTGTTTCCTCTGGATGTTGGAGCCCTAATTTGCTTGCTGAAGG BQ487514Ld07P081B06P081B121R1_07 GTCTCCTTGGCTATTGTTTGTTTCCTCTGGATGTTGGAGCCCTAATTTGCTTGCTGAAGG BQ487514Ld08P081B06P081B121R1_07 GTCTCCTTGGCTATTGTTTGTTTCCTCTGGATGTTGGAGCCCTAATTTGCTTGCTGAAGG BQ487514As01P081B06P081B121R1_06 GTCTCCTTGGCTATTGTTTGTTTCCTCTGGATGTTGGAGCCCTAATTTGCTTGCTGAAGG BQ487514As02P081B06P081B121R1_06 GTCTCCTTGGCTATTGTTTGTTTCCTCTGGATGTTGGAGCCCTAATTTGCTTGCTGAAGG BQ487514Ld12P081B06P081B121R1_08 GTCTCCTTGGCTATTGTTTGTTTCCTCTGGATGTTGGAGCCCTAATTTGCTTGCTGAAGG BQ487514Ld09P081B06P081B121R1_06 GTCTCCTTGGCTATTGTTTGTTTCCTCTGGATGTTGGAGCCCTAATTTGCTTGCTGAAGG BQ487514Ld04P081B06P081B121R1_07 GTCTCCTTGGCTATTGTTTGTTTCCTCTGGATGTTGGAGCCCTAATTTGCTTGCTGAAGG BQ487514Ld06P081B06P081B121R1_07 GTCTCCTTGGCTATTGTTTGTTTCCTCTGGATGTTGGAGCCCTAATTTGCTTGCTGAAGG BQ487514Ld10P081B06P081B121R1_06 GTCTCCTTGGCTATTGTTTGTTTCCTCTGGATGTTGGAGCCCTAATTTGCTTGCTGAAGG BQ487514Ld03P081B06P081B121R1_05 GTCTCCTTGGCTATTGTTTGTTTCCTCTGGATGTTGGAGCCCTAATTTGCTTGCTGAAGG ************************************* ***** **************** BQ487514At01P081B06P081B121R1_08 ACAATGTCATACTAAAGATCATCGTCGTGACAGTCACACTGGCGTGGAGCTCCTGGGCTG BQ487514At02P081B06P081B121R1_07 ACAATGTCATACTAAAGATCATCGTCGTGACAGTCACACTGGCGTGGAGCTCCTGGGCTG BQ487514Ld01P081B06P081B121R1_05 ACAATGTCATACTAAAGATCATCGTGGTGACAGTCACACTGGCGTGGAGCTCCTGGGCTG BQ487514Ld05P081B06P081B121R1_07 ACAATGTCATACTAAAGATCATCGTGGTGACAGTCACACTGGCGTGGAGCTCCTGGGCTG BQ487514Ld11P081B06P081B121R1_06 ACAATGTCATACTAAAGATCATCGTGGTGACAGTCACACTGGCGTGGAGCTCCTGGGCTG BQ487514Tu02P081B06P081B121R1_06 ACAATGTCATACTAAAGATCATCGTGGTGACAGTCACACTGGCGTGGAGCTCCTGGGCTG BQ487514Tu01P081B06P081B121R1_07 ACAATGTCATACTAAAGATCATCGTGGTGACAGTCACACTGGCGTGGAGCTCCTGGGCTG BQ487514Ld02P081B06P081B121R1_05 ACAATGTCATACTAAAGATCATCGTGGTGACAGTCACACTGGCGTGGAGCTCCTGGGCTG BQ487514Ld07P081B06P081B121R1_07 ACAATGTCATACTAAAGATCATCGTCGTGACAGTCACACTGGCGTGGAGCTCCTGGGCTG BQ487514Ld08P081B06P081B121R1_07 ACAATGTCATACTAAAGATCATCGTCGTGACAGTCACACTGGCGTGGAGCTCCTGGGCTG BQ487514As01P081B06P081B121R1_06 ACAATGTCATACTAAAGATCATTGTCGTGACAGTCACACTGGCGTGGAGCTCCTGGGCTG BQ487514As02P081B06P081B121R1_06 ACAATGTCATACTAAAGATCATTGTCGTGACAGTCACACTGGCGTGGAGCTCCTGGGCTG BQ487514Ld12P081B06P081B121R1_08 ACAATGTCATACTAAAGATCATCGTCGTGACAGTCACACTGGCGTGGAGCTCCTGGGCTG BQ487514Ld09P081B06P081B121R1_06 ACAATGTCATACTAAAGATCATCGTCGTGACAGTCACACTGGCGTGGAGCTCCTGGGCTG BQ487514Ld04P081B06P081B121R1_07 ACAATGTCATACTAAAGATCATCGTCGTGACAGTCACACTGGCGTGGAGCTCCTGGGCTG BQ487514Ld06P081B06P081B121R1_07 ACAATGTCATACTAAAGATCATCGTCGTGACAGTCACACTGGCGTGGAGCTCCTGGGCTG BQ487514Ld10P081B06P081B121R1_06 ACAATGTCATACTAAAGATCATCGTCGTGACAGTCACACTGGCGTGGAGCTCCTGGGCTG BQ487514Ld03P081B06P081B121R1_05 ACAATGTCATACTAAAGATCATCGTCGTGACAGTCACACTGGCGTGGAGCTCCTGGGCTG ********************** ** ********************************** BQ487514At01P081B06P081B121R1_08 CCTACCCATTCATGAGCGCTGCTGTGAACCCAAGGAGAAAGGCTCTGGCCATCTATCCCG BQ487514At02P081B06P081B121R1_07 CCTACCCATTCATGAGCGCTGCTGTGAACCCAAGGAGAAAGGCTCTGGCCATCTATCCCG BQ487514Ld01P081B06P081B121R1_05 CCTACCCATTCATGAGCGCTGCTGTGAACCCAAGGAGAAAGGCTCTGGCCATATATCCCG BQ487514Ld05P081B06P081B121R1_07 CCTACCCATTCATGAGCGCTGCTGTGAACCCAAGGAGAAAGGCTCTGGCCATATATCCCG BQ487514Ld11P081B06P081B121R1_06 CCTACCCATTCATGAGCGCTGCTGTGAACCCAAGGAGAAAGGCTCTGGCCATATATCCCG BQ487514Tu02P081B06P081B121R1_06 CCTACCCATTCATGAGCGCTGCTGTGAACCCAAGGAGAAAGGCTCTGGCCATATATCCCG BQ487514Tu01P081B06P081B121R1_07 CCTACCCATTCATGAGCGCTGCTGTGAACCCAAGGAGAAAGGCTCTGGCCATATATCCCG BQ487514Ld02P081B06P081B121R1_05 CCTACCCATTCATGAGCGCTGCTGTGAACCCAAGGAGAAAGGCTCTGGCCATATATCCCG BQ487514Ld07P081B06P081B121R1_07 CCTACCCATTCATGAGCGCTGCTGTGAACCCAAGGAGAAAGGCTCTGGCCATCTATCCTG BQ487514Ld08P081B06P081B121R1_07 CCTACCCATTCATGAGCGCTGCTGTGAACCCAAGGAGAAAGGCTCTGGCCATATATCCCG BQ487514As01P081B06P081B121R1_06 CCTACCCATTCATGAGTGCTGCTGTGAACCCAAGGAGAAAGGCTCTGGCCATCTATCCCG BQ487514As02P081B06P081B121R1_06 CCTACCCATTCATGAGTGCTGCTGTGAACCCAAGGAGAAAGGCTCTGGCCATCTATCCCG BQ487514Ld12P081B06P081B121R1_08 CCTACCCATTCATGAGCGCTGCTGTGAACCCAAGGAGAAAGGCTCTGGCCATCTATCCTG BQ487514Ld09P081B06P081B121R1_06 CCTACCCATTCATGAGCGCTGCTGTGAACCCAAGGAGAAAGGCTCTGGCCATCTATCCTG BQ487514Ld04P081B06P081B121R1_07 CCTACCCATTCATGAGCGCTGCTGTGAACCCAAGGAGAAAGGCTCTGGCCATCTATCCTG BQ487514Ld06P081B06P081B121R1_07 CCTACCCATTCATGAGCGCTGCTGTGAACCCAAGGAGAAAGGCTCTGGCCATCTATCCTG BQ487514Ld10P081B06P081B121R1_06 CCTACCCATTCATGAGCGCTGCTGTGAACCCAAGGAGAAAGGCTCTGGCCATCTATCCTG BQ487514Ld03P081B06P081B121R1_05 CCTACCCATTCATGAGCGCTGCTGTGAACCCAAGGAGAAAGGCTCTGGCCATCTATCCTG **************** *********************************** ***** * BQ487514At01P081B06P081B121R1_08 TATTCCTCATGTACATCTCGGTGGGGT--------------------------------- BQ487514At02P081B06P081B121R1_07 TATTCCTCATGTACATCTCGGTGGGGTTCCCCATAATTG--------------------- BQ487514Ld01P081B06P081B121R1_05 TATTCCTCATGTACATCTCGGTGGGGTTCCTCATAATTGCAATC------GAATTCCCGC BQ487514Ld05P081B06P081B121R1_07 TATTCCTCATGTACATCTCGGTGGGGTTCCTCATAATTGCAATC------GAATTCCCGC BQ487514Ld11P081B06P081B121R1_06 TATTCCTCATGTACATCTCGGTGGGGTTCCTCATAATTGCAATC------GAATTCCCGC BQ487514Tu02P081B06P081B121R1_06 TATTCCTCATGTACATCTCGGTGGGGTT-------------------------------- BQ487514Tu01P081B06P081B121R1_07 TATTCCTCATGTACATCTCGGTGGGGT--------------------------------- BQ487514Ld02P081B06P081B121R1_05 TATTCCTCATGTACATCTCGGTGGGGTTCCTCATAATTGCAATC------GAATTCCCGC BQ487514Ld07P081B06P081B121R1_07 TATTCCTCATGTACATCTCGGTGGGGTTCCTCATAATTGCAATCACTAGTGAATT--CGC BQ487514Ld08P081B06P081B121R1_07 TATTCCTCATGTACATCTCGGTGGGGTTCCTCATAATTGCAATCACTAGTGAATT--CGC BQ487514As01P081B06P081B121R1_06 TATTCCTCATGTACATCTCGGTGGGGTTCCTCATAATTGC-------------------- BQ487514As02P081B06P081B121R1_06 TATTCCTCATGTACATCTCGGTGGGGTTCCTCATAATTGC-------------------- BQ487514Ld12P081B06P081B121R1_08 TATTCCTCATGTACATCTCGGTGGGGTTCCTCATAATTGCAATC------GAATTCCCGC BQ487514Ld09P081B06P081B121R1_06 TATTCCTCATGTACATCTCGGTGGGGTTCCTCATAATTGCAATC------GAATTCCCGC BQ487514Ld04P081B06P081B121R1_07 TATTCCTCATGTACATCTCGGTGGGGTTCCTCATAATTGCAATC------GAATTCCCGC BQ487514Ld06P081B06P081B121R1_07 TATTCCTCATGTACATCTCGGTGGGGTTCCTCATAATTGCAATC------GAATTCCCGC BQ487514Ld10P081B06P081B121R1_06 TATTCCTCATGTACATCTCGGTGGGGTTCCTCATAATTGCAATC------GAATTCCCGC BQ487514Ld03P081B06P081B121R1_05 TATTCCTCATGTACATCTCGGTGGGGTTCCTCATAATTGCAATC------GAATTCCCGC *************************** BQ487514At01P081B06P081B121R1_08 ------------------------------------------------------------ BQ487514At02P081B06P081B121R1_07 ------------------------------------------------------------ BQ487514Ld01P081B06P081B121R1_05 GGCCGCCATGGCGGCCGGGAGCATGCGACGTCGGGCCCAATTCGCCCTATAGTGAGTCGT BQ487514Ld05P081B06P081B121R1_07 GGCCGCCATGGCGGCCGGGAGCATGCGACGTCGGGCCCAATTCGCCCTATAGTGAGTCGT BQ487514Ld11P081B06P081B121R1_06 GGCCGCCATGGCGGCCGGGAGCATGCGACGTCGGGCCCAATTCGCCCTATAGTGAGTCGT BQ487514Tu02P081B06P081B121R1_06 ------------------------------------------------------------ BQ487514Tu01P081B06P081B121R1_07 ------------------------------------------------------------ BQ487514Ld02P081B06P081B121R1_05 GGCCGCCATGGCGGCCGGGAGCATGCGACGTCGGGCCCAATTCGCCCTATAGTGAGTCGT BQ487514Ld07P081B06P081B121R1_07 GGCCGCC-TGCAGGTC--GACCATATGGGAGAGCTCCCAACGCGTTGGATGCATAGCTTG BQ487514Ld08P081B06P081B121R1_07 GGCCGCC-TGCAGGTC--GACCATATGGGAGAGCTCCCAACGCGTTGGATGCATAGCTTG BQ487514As01P081B06P081B121R1_06 ------------------------------------------------------------ BQ487514As02P081B06P081B121R1_06 ------------------------------------------------------------ BQ487514Ld12P081B06P081B121R1_08 GGCCGCCATGGCGGCCGGGAGCATGCGACGTCGGGCCCAATTCGCCCTATAGTGAGTCGT BQ487514Ld09P081B06P081B121R1_06 GGCCGCCATGGCGGCCGGGAGCATGCGACGTCGGGCCCAATTCGCCCTATAGTGAGTCGT BQ487514Ld04P081B06P081B121R1_07 GGCCGCCATGGCGGCCGGGAGCATGCGACGTCGGGCCCAATTCGCCCTATAGTGAGTCGT BQ487514Ld06P081B06P081B121R1_07 GGCCGCCATGGCGGCCGGGAGCATGCGACGTCGGGCCCAATTCGCCCTATAGTGAGTCGT BQ487514Ld10P081B06P081B121R1_06 GGCCGCCATGGCGGCCGGGAGCATGCGACGTCGGGCCCAATTCGCCCTATAGTGAGTCGT BQ487514Ld03P081B06P081B121R1_05 GGCCGCCATGGCGGCCGGGAGCATGCGACGTCGGGCCCAATTCGCCCTATAGTGAGTCGT BQ487514At01P081B06P081B121R1_08 -------------------------------------------- BQ487514At02P081B06P081B121R1_07 -------------------------------------------- BQ487514Ld01P081B06P081B121R1_05 ATTACAATTCACTGGCC--------------------------- BQ487514Ld05P081B06P081B121R1_07 ATTACAATTCACTGG----------------------------- BQ487514Ld11P081B06P081B121R1_06 ATTACAATTCACTG------------------------------ BQ487514Tu02P081B06P081B121R1_06 -------------------------------------------- BQ487514Tu01P081B06P081B121R1_07 -------------------------------------------- BQ487514Ld02P081B06P081B121R1_05 ATTACAATTCACTGGCC--------------------------- BQ487514Ld07P081B06P081B121R1_07 AGTATTCTATAGTGTCACCTAAATAGCTTGGCGTAATCATGGTC BQ487514Ld08P081B06P081B121R1_07 AGTATTCTATAGTGTCACCTAAATAGCTTGGCGTAATCATGG-- BQ487514As01P081B06P081B121R1_06 -------------------------------------------- BQ487514As02P081B06P081B121R1_06 -------------------------------------------- BQ487514Ld12P081B06P081B121R1_08 ATTACAATTCACTGGC---------------------------- BQ487514Ld09P081B06P081B121R1_06 ATTACAATTCACTGGCCGCCGTTTTACATG-------------- BQ487514Ld04P081B06P081B121R1_07 ATTACAATTCACTGGC---------------------------- BQ487514Ld06P081B06P081B121R1_07 ATTACAATTCACTGGC---------------------------- BQ487514Ld10P081B06P081B121R1_06 ATTACAATTCACTGGC---------------------------- BQ487514Ld03P081B06P081B121R1_05 ATTACAATTCACTGGCC---------------------------