CLUSTAL W (1.83) multiple sequence alignment


USDA012F_E11_BE425978At01P004G06P004G12F      ---------CATCCGAAATCAGTATGGTTGGGCTGACAGA
USDA012F_F11_BE425978At02P004G06P004G12F      ---------CATCCGAAATCAGTATGGTTGGGCTGACAGA
USDA012F_B11_BE425978Tu02P004G06P004G12F      --------------GAAATCAGTATGGTTGGGCTGACAGA
USDA012F_A12_BE425978Ld03P004G06P004G12F      ---------------AAATCAGTATGGTTGGGCTGACAGA
USDA012F_E12_BE425978Ld07P004G06P004G12F      ---------------AAATCAGTATGGTTGGGCTGACAGA
USDA012F_D12_BE425978Ld06P004G06P004G12F      ---------------AAATCAGTATGGTTGGGCTGACAGA
USDA012F_G12_BE425978Ld09P004G06P004G12F      GCTGTTCCTCATCCGAAATCAGTATGGTTGGGCTGACAGA
USDA012F_C12_BE425978Ld05P004G06P004G12F      --------TCATCCGAAATCAGTATGGTTGGGCTGACAGA
USDA012F_G11_BE425978Ld01P004G06P004G12F      --------TCATCCGAAATCAGTATGGTTGGGCTGACAGA
USDA012F_D11_BE425978As02P004G06P004G12F      ---------------AAATCAGTATGGTTGGGCTGACAGA
USDA012F_B12_BE425978Ld04P004G06P004G12F      ---------CATCCGAAATCAGTATGGTTGGGCTGACAGA
USDA012F_F12_BE425978Ld08P004G06P004G12F      --------TCATCCGAAATCAGTATGGTTGGGCTGACAGA
USDA012F_C11_BE425978As01P004G06P004G12F      --------------------AGTATGGTTGGGCTGACAGA
                                                                  ********************

USDA012F_E11_BE425978At01P004G06P004G12F      GGTAAGTCGAGGATCTTAACTCCTTGTTCTGTGTTGTTCA
USDA012F_F11_BE425978At02P004G06P004G12F      GGTAAGTCGAGGATCTTAACTCCTTGTTCTGTCTTGTTCA
USDA012F_B11_BE425978Tu02P004G06P004G12F      GGTAAGTCGAGGATCTTAACTCCTAGTTCTGTCTTGTTCA
USDA012F_A12_BE425978Ld03P004G06P004G12F      GGTAAGTTGAAGATCTTAACTCCTAGTTCTGTCTTGTTCA
USDA012F_E12_BE425978Ld07P004G06P004G12F      GGTAAGTTGAAGATCTTAACTCCTAGTTCTGTCTTGTTCA
USDA012F_D12_BE425978Ld06P004G06P004G12F      GGTAAGTTGAAGATCTTAACTCCTAGTTCTGTCTTGTTCA
USDA012F_G12_BE425978Ld09P004G06P004G12F      GGTAAGTTGAAGATCTTAACTCCTAGTTCTGTCTTGTTCA
USDA012F_C12_BE425978Ld05P004G06P004G12F      GATAAGTTGAAGATCTTAACTCCTAGTTCTGTCTTGTTCA
USDA012F_G11_BE425978Ld01P004G06P004G12F      GGTAAGTTGAAGATCTTAACTCCTAGTTCTGTCTTGTTCA
USDA012F_D11_BE425978As02P004G06P004G12F      GGTAAGTTGAGGATCTTAACTCCTAGTTCTGTCTTGTTCA
USDA012F_B12_BE425978Ld04P004G06P004G12F      GGTAAGTTGAAGATCTTAACTCCTAGTTCTGTCTTGTTCA
USDA012F_F12_BE425978Ld08P004G06P004G12F      GGTAAGTTGAAGATCTTAACTCCTAGTTCTGTCTTGTTCA
USDA012F_C11_BE425978As01P004G06P004G12F      GGTAAGTTGAGGATCTTAACTCCTAGTTCTGTCTTGTTCA
                                              * ***** ** ************* ******* *******

USDA012F_E11_BE425978At01P004G06P004G12F      TGCATTTTCCATCTGTACTAAAAAAACATTTTT-AATATA
USDA012F_F11_BE425978At02P004G06P004G12F      TGCATTTTCCATCTATACTAAAAAAACATTTTTTAATATA
USDA012F_B11_BE425978Tu02P004G06P004G12F      TGCATTTTCCATCTATACTAAAAAAACATTTTTTAATATA
USDA012F_A12_BE425978Ld03P004G06P004G12F      TGCATTTTCCATCTATACTAAAAAAACATTATATATTTTT
USDA012F_E12_BE425978Ld07P004G06P004G12F      TGCATTTTCCATCTATACTAAAAAA-CATTATATATTTTT
USDA012F_D12_BE425978Ld06P004G06P004G12F      TGCATTTTCCATCTATACTAAAAAAACATTATATATTTTT
USDA012F_G12_BE425978Ld09P004G06P004G12F      TGCATTTTCCATCTATACTAAAAAAACATTATATATTTTT
USDA012F_C12_BE425978Ld05P004G06P004G12F      TGCATTTTCCATCTATACTAAAAAAACATTATATATTTTT
USDA012F_G11_BE425978Ld01P004G06P004G12F      TGCATTTTCCATCTATACTAAAAAAACATTATATATTTTT
USDA012F_D11_BE425978As02P004G06P004G12F      TGCATTTTCCATCTATACTAAAAAAACATTATATATTTTT
USDA012F_B12_BE425978Ld04P004G06P004G12F      TGCATTTTCCATCTATACTAAAAAAACATTATATATTTTT
USDA012F_F12_BE425978Ld08P004G06P004G12F      TGCATTTTCCATCTATACTAAAAAAACATTATATATTTTT
USDA012F_C11_BE425978As01P004G06P004G12F      TGCATTTTCCATCTATACTAAAAAAACATTATATATTTTT
                                              ************** ********** **** *  * * * 

USDA012F_E11_BE425978At01P004G06P004G12F      TTTTCTTTAAAACTAATTTAATGCATTCTGTTACTGCACT
USDA012F_F11_BE425978At02P004G06P004G12F      TTTTCTTTAAAACTAATTTAATGCATTCTGTTACTGCACT
USDA012F_B11_BE425978Tu02P004G06P004G12F      TTTTCTTTGAAACTAATTTAATGCATTCTGTTACTGCATT
USDA012F_A12_BE425978Ld03P004G06P004G12F      -CTTTAATGGAAATAATTTAATGCATTCTGTTACTGCATT
USDA012F_E12_BE425978Ld07P004G06P004G12F      -CTTTAATGGAAATAATTTAATGCATTCTGTTACTGCATT
USDA012F_D12_BE425978Ld06P004G06P004G12F      -CTTTAATGGAAATAATTTAATGCATTCTGTTACTGCATT
USDA012F_G12_BE425978Ld09P004G06P004G12F      -CTTTAATGGAAATAATTTAATGCATTCTGTTACTGCATT
USDA012F_C12_BE425978Ld05P004G06P004G12F      -CTTTAATGGAAATAATTTAATGCATTCTGTTACTGCATT
USDA012F_G11_BE425978Ld01P004G06P004G12F      -CTTTAATGGAAATAATTTAATGCATTCTGTTACTGCATT
USDA012F_D11_BE425978As02P004G06P004G12F      TCTTTAATGGAACTAATTTAATGCATTCTGTTACTGCATT
USDA012F_B12_BE425978Ld04P004G06P004G12F      -CTTTAATGGAAATAATTTAATGCATTCTGTTACTGCATT
USDA012F_F12_BE425978Ld08P004G06P004G12F      -CTTTAATGGAAATAATTTAATGCATTCTGTTACTGCATT
USDA012F_C11_BE425978As01P004G06P004G12F      TCTTTAATGGAACTAATTTAATGCATTCTGTTACTGCATT
                                                **   *  ** ************************* *

USDA012F_E11_BE425978At01P004G06P004G12F      TGATATGTACCATATCTCGAAAAGAGAAAAACACTTGACT
USDA012F_F11_BE425978At02P004G06P004G12F      TGATATGTATCATATCTCGAAAAGAGAAAAACACTTGACT
USDA012F_B11_BE425978Tu02P004G06P004G12F      TGATATGTACCATATCTCGAAAAGAGAAAAACACTTGACC
USDA012F_A12_BE425978Ld03P004G06P004G12F      TGATATGTACTGTATCTTGAAAAGAGAAAAACATTTGACC
USDA012F_E12_BE425978Ld07P004G06P004G12F      TGATATGTACTGTATCTTGAAAAGAGAAAAACATTTGACC
USDA012F_D12_BE425978Ld06P004G06P004G12F      TGATATGTACTGTATCTTGAAAAGAGAAAAACATTTGACC
USDA012F_G12_BE425978Ld09P004G06P004G12F      TGATATGTACTGTATCTTGAAAAGAGAAAAACATTTGACC
USDA012F_C12_BE425978Ld05P004G06P004G12F      TGATATGTACTGTATCTTGAAAAGAGAAAAACATTTGACC
USDA012F_G11_BE425978Ld01P004G06P004G12F      TGATATGTACTGTACCTTGAAAAGAGAAAAACATTTGACC
USDA012F_D11_BE425978As02P004G06P004G12F      TGATATGTACTGTATCTTGAGAAGAGAAAAACATTTGACC
USDA012F_B12_BE425978Ld04P004G06P004G12F      TGATATGTACTGTATCTTGAAAAGAGAAAAACATTTGACC
USDA012F_F12_BE425978Ld08P004G06P004G12F      TGATATGTACTGTATCTTGAAAAGAGAAAAACATTTGACC
USDA012F_C11_BE425978As01P004G06P004G12F      TGATATGTACTGTATCTTGAGAAGAGAAAAACATTTGACC
                                              *********   ** ** ** ************ ***** 

USDA012F_E11_BE425978At01P004G06P004G12F      GG-GTGTGTTGAATATGTTGCAGCCGCAAGCCAGAGAAAA
USDA012F_F11_BE425978At02P004G06P004G12F      GG-GTGTGTTGAATATGTTGCAGCCGCAAGCCAGAGAAAA
USDA012F_B11_BE425978Tu02P004G06P004G12F      GG-GTGTGCTGAATATGTTGCAGCCGCAAGCCAGAGAAAA
USDA012F_A12_BE425978Ld03P004G06P004G12F      AGCGTGTGTTGAATATGTTGCAGCCACAAGCCAGAGAAAA
USDA012F_E12_BE425978Ld07P004G06P004G12F      AGCGTGTGTTGAATATGTTGCAGCCACAAGCCAGAGAAAA
USDA012F_D12_BE425978Ld06P004G06P004G12F      AGCGTGTGTTGAATATGTTGCAGCCACAAGCCAGAGAAAA
USDA012F_G12_BE425978Ld09P004G06P004G12F      AGCGTGTGTTGAATATGTTGCAGCCACAAGCCAGAGAAAA
USDA012F_C12_BE425978Ld05P004G06P004G12F      AGCGTGTGTTGAATATGTTGCAGCCACAAGCCAGAGAAAA
USDA012F_G11_BE425978Ld01P004G06P004G12F      AGCGTGTGTTGAATATGTTGCAGCCACAAGCCAGAGAAAA
USDA012F_D11_BE425978As02P004G06P004G12F      AGCGTGTGTTGAATATGTTGCAGCCACAAGCCAGAGAAAA
USDA012F_B12_BE425978Ld04P004G06P004G12F      AGCGTGTGTTGAATATGTTGCAGCCACAAGCCAGAGAAAA
USDA012F_F12_BE425978Ld08P004G06P004G12F      AGCGTGTGTTGAATATGTTGCAGCCGCAAGCCAGAGAAAA
USDA012F_C11_BE425978As01P004G06P004G12F      AGCGTGTGTTGAATATGTTGCAGCCACAAGCCAGAGAAAA
                                               * ***** **************** **************

USDA012F_E11_BE425978At01P004G06P004G12F      GGCTGATAACGAAGGATTTGAGGTCAGTGTTGTTAAGACC
USDA012F_F11_BE425978At02P004G06P004G12F      GGCTGATAACGAAGGATTTGAGGTCAGTGTTGTTAAGACC
USDA012F_B11_BE425978Tu02P004G06P004G12F      GGCTGATAACGAAGGATTTGAAGTAAGTGTTGTTAAGACC
USDA012F_A12_BE425978Ld03P004G06P004G12F      GGCTGACAACGAAGGATTTGAGGTAAGTGTTGTTAAGACC
USDA012F_E12_BE425978Ld07P004G06P004G12F      GGCTGACAACGAAGGATTTGAGGTAAGTGTTGTTAAGACC
USDA012F_D12_BE425978Ld06P004G06P004G12F      GGCTGACAACGAAGGATTTGAGGTAAGTGTTGTTAAGACC
USDA012F_G12_BE425978Ld09P004G06P004G12F      GGCTGACAACGAAGGATTTGAGGTAAGTGTCGTTAAGACC
USDA012F_C12_BE425978Ld05P004G06P004G12F      GGCTGACAACGAAGGATTTGAGGTAAGTGTTGTTAAGACC
USDA012F_G11_BE425978Ld01P004G06P004G12F      GGCTGACAACGAAGGATTTGAGGTAAGTGTTGTTAAGACC
USDA012F_D11_BE425978As02P004G06P004G12F      GGCTGACAACGAAGGATTTGAGGTAAGTGTTGTTAAGACC
USDA012F_B12_BE425978Ld04P004G06P004G12F      GGCTGACAACGAAGGATTTGAGGTAAGTGTTGTTAAGACC
USDA012F_F12_BE425978Ld08P004G06P004G12F      GGCTGACAACGAAGGATTTGAGGTAAGTGTTGTTAAGACC
USDA012F_C11_BE425978As01P004G06P004G12F      GGCTGACAACGAAGGATTTGAGGTAAGTGTTGTTAAGACC
                                              ****** ************** ** ***** *********

USDA012F_E11_BE425978At01P004G06P004G12F      AGCTTTAAGGCCAACACGAAAGCTTTGGCAGAAAATGAA-
USDA012F_F11_BE425978At02P004G06P004G12F      AGCTTTAAGGCCAACACAAAAGCTTTGGCAGAAAATGAA-
USDA012F_B11_BE425978Tu02P004G06P004G12F      AGCTTTAAGGCCAACACAAAAGCTTTGGCAGAAAATGAAG
USDA012F_A12_BE425978Ld03P004G06P004G12F      AGTTTTAAGGCCAACACAAAAGCTTTGGCAGAAAATGAAG
USDA012F_E12_BE425978Ld07P004G06P004G12F      AGTTTTAAGGCCAACACAAAAGCTTTGGCAGAAAATGAAG
USDA012F_D12_BE425978Ld06P004G06P004G12F      AGTTTTAAGGCCAACACAAAAGCTTTGGCAGAAAATGAAG
USDA012F_G12_BE425978Ld09P004G06P004G12F      AGTTTTAAGGCCAACACAAAAGCTTTGGCAGAAAATGAAG
USDA012F_C12_BE425978Ld05P004G06P004G12F      AGTTTTAAGGCCAACACAAAAGCTTTGGCAGAAAATGAAG
USDA012F_G11_BE425978Ld01P004G06P004G12F      AGTTTTAAGGCCAACACAAAAGCTTTGGCAGAAAATGAAG
USDA012F_D11_BE425978As02P004G06P004G12F      AGTTTTAAGGCCAACACAAAAGCTTTGGCAGAAAATGAA-
USDA012F_B12_BE425978Ld04P004G06P004G12F      AGTTTTAAGGCCAACACAAAAGCTTTGGCAGAAAATGAAG
USDA012F_F12_BE425978Ld08P004G06P004G12F      AGTTTTAAGGCCAACACAAAAGCTTCGGCAGAAAATGAAG
USDA012F_C11_BE425978As01P004G06P004G12F      AGTTTTAAGGCCAACACAAAAGCTTTGGCAGAAAATGAAG
                                              ** ************** ******* ************* 

USDA012F_E11_BE425978At01P004G06P004G12F      ----------------------------------------
USDA012F_F11_BE425978At02P004G06P004G12F      ----------------------------------------
USDA012F_B11_BE425978Tu02P004G06P004G12F      GGAATGGAATTG----------------------------
USDA012F_A12_BE425978Ld03P004G06P004G12F      GCGATGGAATTGAATCGA-ATTCCCGCGGCCGCCATGGCG
USDA012F_E12_BE425978Ld07P004G06P004G12F      GCGATGGAATTGAATCGA-ATTCCCGCGGCCGCCATGGCG
USDA012F_D12_BE425978Ld06P004G06P004G12F      GCGATGGAATTGAATCGA-ATTCCCGCGGCCGCCATGGCG
USDA012F_G12_BE425978Ld09P004G06P004G12F      GCGATGGAATTGAATCGA-ATTCCCGCGGCCGCCATGGCG
USDA012F_C12_BE425978Ld05P004G06P004G12F      GCGATGGAATTGAATCGA-ATTCCCGCGGCCGCCATGGCG
USDA012F_G11_BE425978Ld01P004G06P004G12F      GCGATGGAATTGAATCGA-ATTCCCGCGGCCGCCATGGCG
USDA012F_D11_BE425978As02P004G06P004G12F      ----------------------------------------
USDA012F_B12_BE425978Ld04P004G06P004G12F      GCGATGGAATTGAATCACTAGTGAATTCGCGGCCGCCTGC
USDA012F_F12_BE425978Ld08P004G06P004G12F      GCGATGGAATTGAATCACTAGTGAATTCGCGGCCGCCTGC
USDA012F_C11_BE425978As01P004G06P004G12F      GCGATGGAATTG----------------------------
                                                                                      

USDA012F_E11_BE425978At01P004G06P004G12F      ----------------------------------------
USDA012F_F11_BE425978At02P004G06P004G12F      ----------------------------------------
USDA012F_B11_BE425978Tu02P004G06P004G12F      ----------------------------------------
USDA012F_A12_BE425978Ld03P004G06P004G12F      GCCGGGAGCATGCGACGTCGGGCCCAATTCGCCCTATAGT
USDA012F_E12_BE425978Ld07P004G06P004G12F      GCCGGGAGCATGCGACGTCGGGCCCAATTCGCCCTATAGT
USDA012F_D12_BE425978Ld06P004G06P004G12F      GCCGGGAGCATGCGACGTCGGGCCCAATTCGCCCTATAGT
USDA012F_G12_BE425978Ld09P004G06P004G12F      GCCGGGAGCATGCGACGTCGGGCCCAATTCGCCCTATAGT
USDA012F_C12_BE425978Ld05P004G06P004G12F      GCCGGGAGCATGCGACGTCGGGCCCAATTCGCCCTATAGT
USDA012F_G11_BE425978Ld01P004G06P004G12F      GCCGGGAGCATGCGACGTCGGGCCCAATTCGCCCTATAGT
USDA012F_D11_BE425978As02P004G06P004G12F      ----------------------------------------
USDA012F_B12_BE425978Ld04P004G06P004G12F      AGGTCGACCATATGGGAGAGCTCCCAACGCGTTGGATGCA
USDA012F_F12_BE425978Ld08P004G06P004G12F      AGGTCGACCATATGGGAGAGCTCCCAACGCGTTGGATGCA
USDA012F_C11_BE425978As01P004G06P004G12F      ----------------------------------------
                                                                                      

USDA012F_E11_BE425978At01P004G06P004G12F      ----------------------------------------
USDA012F_F11_BE425978At02P004G06P004G12F      ----------------------------------------
USDA012F_B11_BE425978Tu02P004G06P004G12F      ----------------------------------------
USDA012F_A12_BE425978Ld03P004G06P004G12F      GAGTCGTATTACAATTCACTGGCC----------------
USDA012F_E12_BE425978Ld07P004G06P004G12F      GAGTCGTATTACAATTCACT--------------------
USDA012F_D12_BE425978Ld06P004G06P004G12F      GAGTCGTATTACAATTCACT--------------------
USDA012F_G12_BE425978Ld09P004G06P004G12F      GAGTCGTATTACAATTCACTGGC-----------------
USDA012F_C12_BE425978Ld05P004G06P004G12F      GAGTCGTATTACAATTCACTGG------------------
USDA012F_G11_BE425978Ld01P004G06P004G12F      GAGTCGTATTACAATTCACT--------------------
USDA012F_D11_BE425978As02P004G06P004G12F      ----------------------------------------
USDA012F_B12_BE425978Ld04P004G06P004G12F      TAGCTTGAGTATTCTATAGTGTCACCTAAATAGCTTGGCG
USDA012F_F12_BE425978Ld08P004G06P004G12F      TAGCTTGAGTATTCTATAGTGTCACCTAAATAGCTTGGCG
USDA012F_C11_BE425978As01P004G06P004G12F      ----------------------------------------
                                                                                      

USDA012F_E11_BE425978At01P004G06P004G12F      ---------------
USDA012F_F11_BE425978At02P004G06P004G12F      ---------------
USDA012F_B11_BE425978Tu02P004G06P004G12F      ---------------
USDA012F_A12_BE425978Ld03P004G06P004G12F      ---------------
USDA012F_E12_BE425978Ld07P004G06P004G12F      ---------------
USDA012F_D12_BE425978Ld06P004G06P004G12F      ---------------
USDA012F_G12_BE425978Ld09P004G06P004G12F      ---------------
USDA012F_C12_BE425978Ld05P004G06P004G12F      ---------------
USDA012F_G11_BE425978Ld01P004G06P004G12F      ---------------
USDA012F_D11_BE425978As02P004G06P004G12F      ---------------
USDA012F_B12_BE425978Ld04P004G06P004G12F      TAATCATGGTCATAG
USDA012F_F12_BE425978Ld08P004G06P004G12F      TAATCATGG------
USDA012F_C11_BE425978As01P004G06P004G12F      ---------------