CLUSTAL W (1.83) multiple sequence alignment


USDA031R_C08_BF292349Ld05P017H01P017H071      -----------------AAATCACTAGTGAATTCGCGGCC
USDA031R_H07_BF292349Ld02P017H01P017H071      CCTTCATCTTGGTGTAAAAATCACTAGAGAACTCGCCCCC
                                                               ********** *** ****  **

USDA031R_C08_BF292349Ld05P017H01P017H071      GCCTGCGGGTCGACTATGTGGGAGAGCTCCCAACGCGGTG
USDA031R_H07_BF292349Ld02P017H01P017H071      CCCTGCAGGTCCACTATGTGAGAGCCCCCCCCACGCGGTA
                                               ***** **** ******** ***  * *** ******* 

USDA031R_C08_BF292349Ld05P017H01P017H071      GATGCATAGCTTGAGTTTTCTATAGTGTCACCTATATAGC
USDA031R_H07_BF292349Ld02P017H01P017H071      GATGCATAGCTAGATTATTCTATA----------------
                                              *********** ** * *******                

USDA031R_C08_BF292349Ld05P017H01P017H071      TGGGCATAATCATGGTC
USDA031R_H07_BF292349Ld02P017H01P017H071      -----------------