Sequence ID: DB080G17_R1.ab1

Motif:(TAAA)3
Motif length:4
SSR:TAAATAAATAAA
SSR length:12

SSR flanking primers:

OrientationStartLenTmGC%Any3'Primer SeqProduct SizeSeq SizeIncluded SizePair_anyPair_3'
1FORWARD7242154.8942.864.003.00AACCAGTTCAGTTCACTCTGA1629219215.003.00
 REVERSE8852155.1242.862.001.00AGAGTTTGTGTAGCAGGTTGA

Primer view:

1TCGACTCTGAGGATCCGATGGCTAACATCGACTGGTTTCTAACTAACAGCAGGTGACTCA
61TCAATAGGCAAACCGACATATATATATAACTAGCCAACAACCATATGACATTGTACCACA
121TAGGAAGTTAAACAAGAACCTAGCTAGCAAGCGAGGTATATATCGATCCTGTCACTACAT
181ACGTGGTTCAACTTTCCAGTGATAAATTGATACTACCAAGCAAGAACGGTACGTTTGACG
241CAGCTGATGAAGCAAGTAATACATTTCCTATGCATGCTCGTGGGCACGAGAGGCGTCAAG
301AATGCTCTCGGAAAACTAATACTCCCAAGAAGACGGATGGTGATGCTCTCTTCAATGGCC
361TCATCTACGGCAGTCCTTAACCAGCTTCTTTATCCAGCAGGAGTTCGTCGTGTTCCGATG
421ATCTTCCTGCCCTTCTGGTTCTGCTCTCTTTTTCTTTTTTACAGAGAGAAAGCCAAGAAG
481ACGAAGCGCAATCAAACCAGCGCATCGTTAGCAGAGAAAGCCATGAAAATTTTGTGTGCC
541AGGGCAATTCACAAGCTTAGTGGTGATGGATGGATTAACGCAGGCTTCAATGTTTCTCTA
601GTGTGTACTAATGTTTTACTTTAGTCATCACGGACTAAAACTTAACCAAACAAAGACAAA
661GGAGAACAAAACAAAATTAGCAGTAATTAGTGAGCGTCTACTGCTAGTTTCGTTTCATAG
721AACAACCAGTTCAGTTCACTCTGAGTCGTGCACAAGTTTGGATACATCGAGATGATTAGC
     >>>>>>>>>>>>>>>>>>>>>                                   
781ACATTTCTTTCAAGGCCGGTCCTGAGATTTCGGGCCCCCAGGCGAAACTTAAACTTGAGC
841CCTTAAATAAATAAAACAACCGTTTCAACCTGCTACACAAACTCTAATTTCGTCTGCTTC
                         <<<<<<<<<<<<<<<<<<<<<               
901ATGTGAGCGATGTTTTGGCAC
Outer forward primer:>>>>>>>>>>
Outer reverse primer:<<<<<<<<<<
Oligo primer:^^^^^^^^^^
Forward SBE/Allele primer:Blue
Reverse SBE/allele primer:Brown
Target:Red
Included region:Green
excluded region:Orange

Primer3Batch v1.0