Sequence ID: DB088L13_F1.ab1

Motif:(ATT)4
Motif length:3
SSR:ATTATTATTATT
SSR length:12

SSR flanking primers:

OrientationStartLenTmGC%Any3'Primer SeqProduct SizeSeq SizeIncluded SizePair_anyPair_3'
1FORWARD5812154.9842.866.002.00ATGTCTCTTAATTCCGAGGTC1459109105.000.00
 REVERSE7252054.6740.002.000.00ACGATTGAGAAAGTGGTTGT

Primer view:

1CCTACTACCCGTTCACTTTTCAAATCTCCTACTATTTAAATTATTCCTCGAATTTTGAAT
61AAGAGATTTGAGAATTGAACCGAAGGAGGCCTTTCGCGGGTCCTGTTTGCGTCCCTACAT
121TCCGTGACGGTCCGACGAACCTCCCATGTACTAGTTTCTAGCTAGGTTAATTTACAGATC
181GATGGATGCCCAGCTCACCATATGGTATTTGCGCTAACCCTTGGAGCCCTCCCATAATCT
241AGGTCAAAAATAATTGCACCATCTAGTGGTAGGCTACGACTCTTTATTTGGTCATTTGTT
301GATGCAGGCCATTTTCATTAGTTCCATTGTTGCGTGCAGTCTTAGAGCAGAGACTGAAAA
361TAGTGAACATTTCACTAGCTACCAGTGAATAAGAATTGGTCACAAGCAAGGTTTTAACTA
421TCGGATTCCGTTTTACCTTCCCGGGAACCGGGATTTGCGGTAACAAGAAAATCCGAACAA
481TTTGTTAGACATCATATTCTATCAAATTTAAACATATTTTTTCCTTTTGGAAATGATTAT
541GCATTACACATTCATAAATTCTGTCTACAACCTGTAGTCCATGTCTCTTAATTCCGAGGT
                                          >>>>>>>>>>>>>>>>>>>
601CACAGGTTCATTGTGGGTTAAGTTCAATATTTTTTTAATAAAACAAGCATTATTATTATT
 >>                                                          
661TTGTGGGGAAGAAAATCCTGATCGGACGACAATGTCAATCCAGAAACAACCACTTTCTCA
                                              <<<<<<<<<<<<<<<
721ATCGTCCGAGCAATACGCCGAGCTAGTTTCACATATACAAGCATCGTTCTCTTTTTCTCC
 <<<<<                                                       
781TGTCTGCAACCTTACCACACAAGGATTCAGAACCCAGTGCGCGGTTGTGCAATTGTTTAA
841TTGTCAGCTTACTTGTAAGTGAAGAAGTGGCTAGCCAGCTTACTAGTGGTGCAGCTAATC
901ATGAGACCCA
Outer forward primer:>>>>>>>>>>
Outer reverse primer:<<<<<<<<<<
Oligo primer:^^^^^^^^^^
Forward SBE/Allele primer:Blue
Reverse SBE/allele primer:Brown
Target:Red
Included region:Green
excluded region:Orange

Primer3Batch v1.0