Sequence ID: DB069A20_F1.ab1

Motif:(AAG)4
Motif length:3
SSR:AAGAAGAAGAAG
SSR length:12

SSR flanking primers:

OrientationStartLenTmGC%Any3'Primer SeqProduct SizeSeq SizeIncluded SizePair_anyPair_3'
1FORWARD6262055.1640.006.002.00AATATTGGACATGCGAAGAC1699079074.002.00
 REVERSE7942154.9947.625.003.00GATGCAGCCTGTGTATCTTAC

Primer view:

1GGATGCCGTCGGCTCTGTCGAGTTTGATTTGTCTTGTGGAAATTTGCTCGCAAATTTGAA
61TTCTCATTGATATATCATTGATACCTCGTTGATATATCATTGATTTTGTCCCATGCCATT
121TGAATTTCGAACATATTTCATTGATATCTCATCGATGTATCGTTGATTTTGTCCCGTACC
181ATTCGAATATCATTGAATTTTGTTGCATATCATTGAACTCATTGAAATATCTTTGAATTC
241AATGAAATTTATGTGTATATCATAGAAAGTTCTGTAGGCATAAAATCATTTCAATGATAT
301GGCAATAAAAATAATGATATAGTAATTATCTCATTTTTAAATAAAAATAATAATTTATAT
361TCAATTGATATGGTAATGAAATCAGATTGGTATTCTAGTAATGATGTTGAAAAATTCCAG
421TGGTGTATTAATTGTATAATATACTCTAGTGAAATAGTTGCAAATGGTTTTGAAATAGTA
481ATGATGTTGATTAGATGACAGAGCACGTGGGTCGGACCTATCCGTTGAATGCTGATAAGA
541CACGAAATAGGGGCTGCTACACTTTATGACAGGCCAATGCCTGGTTGGAGGACCGGTTGC
601TGGTAACTAGCCGGCCCGGTAAAAAAATATTGGACATGCGAAGACAGGTCAAAGAAGAAG
                           >>>>>>>>>>>>>>>>>>>>              
661AAGAAAACGAACACAATAACTGTTGAAGAGCTACACAATGTACCACTGTTTGGGGAAAAA
721ATTCCGTAAGCAATGACCTATGCATGCGAAGAGAGTCCTTACCAGGGGAGGCAGTAAGAT
                                                      <<<<<<<
781ACACAGGCTGCATCGCAGCGTGTGAAATTATTTGCTTAATTTGTGTTCAGTGCGTGTCCA
 <<<<<<<<<<<<<<                                              
841CGTTCTAAGTGCAATTCTGACTATGGTTTGGCCTTGTCCTGCTCGACATCTTATGATCAC
901CCAGGCA
Outer forward primer:>>>>>>>>>>
Outer reverse primer:<<<<<<<<<<
Oligo primer:^^^^^^^^^^
Forward SBE/Allele primer:Blue
Reverse SBE/allele primer:Brown
Target:Red
Included region:Green
excluded region:Orange

Primer3Batch v1.0