Sequence ID: DB070A19_R1.ab1

Motif:(AAG)4
Motif length:3
SSR:AAGAAGAAGAAG
SSR length:12

SSR flanking primers:

OrientationStartLenTmGC%Any3'Primer SeqProduct SizeSeq SizeIncluded SizePair_anyPair_3'
1FORWARD2342055.5140.007.002.00CGTTTGGTAACCATCATTTC1939059055.003.00
 REVERSE4262154.0642.864.002.00GCTAGATGGAGAAGAAGCATA

Primer view:

1TCGACTCTGAGGATCCAGGAATTATACACTCTCAAAAAGAATTTTAACACCTATCGCTCA
61AAAAAAAGAATTTTAAAACCTAGACAACTTCTGTCAACCAAAACCTAACATCCCCTAGTT
121AAAAAATGGTTTTGTTGTTGATGAGTCAACTGATTTTCAGTTAGAGATTAGTTGACGTGG
181ACGTTAGAGCTTATCACGTGAGAGATGAGAGAGTGAGCATGACCCTTACAATCCGTTTGG
                                                       >>>>>>
241TAACCATCATTTCAACCTATAATTATAGAATTAATTTTGAAATTTCAGAAACAAATTTGT
 >>>>>>>>>>>>>>                                              
301TTGATTGGCACGAAATTGGCCACATGAATTCAATTTCAAATTTTATGGAATCACGTTGTA
361ACAGGAATTGGTCAAAAGAAGAAGAAGAACATGTTTTTATAAAAGTATGCTTCTTCTCCA
                                              <<<<<<<<<<<<<<<
421TCTAGCGCCTCCACGAATTTCACGGCAGAGTCGGCAGCAGAGCTACGGGAAGAACCGATG
 <<<<<<                                                      
481CGGCATGCCGTCTCGAGGATGCAGCAGCGCTACAGGAAGCTGGCCATGGTGCCGGCTGGG
541CTCGAGGAATCTCTCAAGAGGCTTCTCCTGGAATACCTTGCGGTCAATGCTCCAGGGGAA
601ACTGATGCTCTCCTCCAGGTTTGTACCATCTCTGAAACTTTGTCACACAAGTGCCCGCCT
661AGCAAATCTTTGAAGCCGGTGCCAAAGTTGAGGAGCCACATGTTGGAGATCATCCCAGCG
721AAGTGTGAGATATTTGACTATCATCAGTGTCATTGTCAAAAGGGTTGAAGCTGCATTACT
781TAGATACGCACTACAAGGAGCAAGTTCAACTCTCTGACCTGTTCTTTGCTCTTTTGTACT
841CCTACTTTCATTGGCTCTGGTAGATGCCTTTTTCAGAATTTATCCTTCTTTATCTGATTA
901TAGGG
Outer forward primer:>>>>>>>>>>
Outer reverse primer:<<<<<<<<<<
Oligo primer:^^^^^^^^^^
Forward SBE/Allele primer:Blue
Reverse SBE/allele primer:Brown
Target:Red
Included region:Green
excluded region:Orange

Primer3Batch v1.0