Sequence ID: DB081A13_R2.ab1

Motif:(ATGCCG)3
Motif length:6
SSR:ATGCCGATGCCGATGCCG
SSR length:18

SSR flanking primers:

OrientationStartLenTmGC%Any3'Primer SeqProduct SizeSeq SizeIncluded SizePair_anyPair_3'
1FORWARD291955.0042.113.002.00CAACAAACAAATCCTGTGC2129059055.001.00
 REVERSE2402155.1742.862.000.00ATCTTGTCTTCCGTGTATGTG

Primer view:

1AGGATCCCGCTGCTCCCGATCGGAAACCCAACAAACAAATCCTGTGCGTGCGCGGCGCGC
                              >>>>>>>>>>>>>>>>>>>            
61AGCATCCGAACAACCCGACCACGCATACCGAAACGAGCCGGGGACCGGTACGGCGAAGAA
121GCGACAACGCTACCATGCCGATGCCGATGCCGGCGTGCCGAGAGCTCGCGGCGACGGCTC
181GGACGGCGCGCGTGGGCTCAGCAGCTCGGCGGGTGGATACACATACACGGAAGACAAGAT
                                        <<<<<<<<<<<<<<<<<<<<<
241TGGATGGGAACACGCCAACGGGACCAACAGGAAAATGGGGGCCTCCTTTAACGGTTTCCG
301AGGCGGCGGCACACGCTACGTACTGTCCCTGGAAAGGACCGGTCGGTCGATCAGGTGCGT
361GCTAGCGGCCGGGCCCGAGTCTTCCGCCCCCGCATGGCATGGCTACGGACGGCGGCACCG
421CGACGTGCCTGTCTTTGTCAGAGCAATTCGACAGCAACAAGGAGGACCCCATGTTTGGAA
481CCAGACCTTTATTTTTTACGGAAAGCTTTAAGTCATAAGATAAAATTACAAGTAGATAAA
541ATTACAAGAAAAGGTGTTATCTAAAGTTATTGAAAAGCATGGCAGTTCTTTCTCTTTGTT
601CTATGGAAAACCAAATTAAGCTCTTCCTTAAATAGACTGCTGCATCTGTAAAGTGACGGG
661GTAATCCCATTGAAGATGCAATCGTTGCGAATCCTCCAGATACTTCATGCTGCCGCAGTT
721ATGATTTCCATGTGAAAAGTCACTGATGGCTGTAATATGCTCATGTACAAATTGTCCAGG
781GGTGAAATTGGAGCAAATGTCTCTCCAGCAAGTCATGGCAAAAGGACGGTGGAAGAAGAG
841ATGATCCCTGGTTTCAATAATGTTTCTGTTGCAAAGAACACATGAGTAAGACTGGAGGTG
901GAAGT
Outer forward primer:>>>>>>>>>>
Outer reverse primer:<<<<<<<<<<
Oligo primer:^^^^^^^^^^
Forward SBE/Allele primer:Blue
Reverse SBE/allele primer:Brown
Target:Red
Included region:Green
excluded region:Orange

Primer3Batch v1.0