Sequence ID: DH021M07_F1.ab1

Motif:(GAA)4
Motif length:3
SSR:GAAGAAGAAGAA
SSR length:12

SSR flanking primers:

OrientationStartLenTmGC%Any3'Primer SeqProduct SizeSeq SizeIncluded SizePair_anyPair_3'
1FORWARD252155.1642.865.003.00GTTCATTGATAGTGCCACAGT1719059053.002.00
 REVERSE1952155.3352.385.002.00GACCAACGGTCTAGGATACTC

Primer view:

1AGACCTTCTGGCGGCTAGCCATGGGTTCATTGATAGTGCCACAGTGTTGCATTAATTTGG
                          >>>>>>>>>>>>>>>>>>>>>              
61CTCGACCATAGTTTTGAAGAAGAAGAAAAAAAAAGCACATTTGACAAGTCTGTCTTCAAA
121TATAGTACGCTGAAACCCTGAACTTTTTGCTCATGTTTGTGGCTTGCACCGGTCGAGTAT
                                                       <<<<<<
181CCTAGACCGTTGGTCCTGAGCAACTTTGAACAGCCATCGCTCGTACATGAATATATATCT
 <<<<<<<<<<<<<<<                                             
241CTCCTCGAGTCACAGGCTATAAGGTTAATGTTTAAAATGCGATCTCCTAGGTCCTGGGGA
301GCTATCTAATGCGTCAACTGGCCAGTCAAAAGCTGGTTGCTTGATCAACGGAGCAAACTG
361TAAGTTAAACACTACAATGAGCACCTTCTATGTGTGGCCCAACCAGATGGCGCCCTTTTC
421TGAAATTTTTACAAGCTAGTGTTTCTCAACTTCTCAAGTGGATTCTGTTAAGTATATCAA
481ATCTTCTCTTCTTATCAGATCGGTCTTTTAGGTGAAATGGCTAGATAGGGTATCTTAACA
541TGGTATCAGAATCAAAGGTCTCGAGTTTGAGTCTCAATCCTCCCACATTTTCCCATCATT
601ATCCACGTCGGGCGTGGGGGAGCTTTTTTCTTTCCACATCCACGTCGGATGTGAAAGTGG
661GTGTTAAATATATCAAATCCCCTTTTCCTATCAGATCTTCATGCATATATACACTGTTGT
721GACTTTTATTGTTTCTTGTCATTGCCATTTCGAAGAACTTATTTCACTGATAGTTAAGCG
781CGCACGTTTAGAAATATAATCACGCATGCACAAGTCAACATGAAAAAGATGGTTTTTGAC
841TGTGGCACTAGCATGTGAAAACAAAAATTGAATTTGGTGAAAATGACATGCATGGTGCAC
901CATTT
Outer forward primer:>>>>>>>>>>
Outer reverse primer:<<<<<<<<<<
Oligo primer:^^^^^^^^^^
Forward SBE/Allele primer:Blue
Reverse SBE/allele primer:Brown
Target:Red
Included region:Green
excluded region:Orange

Primer3Batch v1.0