Sequence ID: DB087A01_F1.ab1

Motif:(TCGA)3
Motif length:4
SSR:TCGATCGATCGA
SSR length:12

SSR flanking primers:

OrientationStartLenTmGC%Any3'Primer SeqProduct SizeSeq SizeIncluded SizePair_anyPair_3'
1FORWARD512055.3340.004.002.00ACGTTCCCAACTCCTTTTAT1129039033.000.00
 REVERSE1622055.1440.006.000.00TAATTAGGCTGCTTTGCTTC

Primer view:

1GGGCCGTCCGACGGAGATCGTGCGGCGCCCACCCCCGCTTCGTTGTGGCCACGTTCCCAA
                                                    >>>>>>>>>
61CTCCTTTTATTTTGTTTTGTCCCCTGCGTTCGTCCGTCCTACTCGTCCCAGGCTCCTGGC
 >>>>>>>>>>>                                                 
121GTCGATCGATCGACCGCGAGAAGAAGCAAAGCAGCCTAATTAATCAGCAGCAGATCTGCT
                       <<<<<<<<<<<<<<<<<<<<                  
181CCCCTGCACGTTCCCTGCGCAATTGTTCAACCGTGCCATCATCCGGGGCGTTTGCGACCT
241GCCCGGGCTGCGACAGAGCAGGGTCTCCGAATTAATTCCCCACCCAAAGTATATCCAATA
301ATTTTGGCTTCTTTTTCATCAGATGCGCCATGCATGGGCCGATGGCCGGTGGCTGTACTG
361CAAGGCAGAGCTTCAAATTAAGGACCAGCTGATATCCAGCTAGCTACCCCGTGCATGCAT
421GTGCTATTTGACGCACGACGTGAAGAGCTTTCCAAGTTTTGAGCTCATGTTTTTTTTTCT
481GTCGAAGATGAGGTTTTACCTCCGCACTATATGCAACATAGTACTAACGTTAAGTACGGA
541GTACATGTATATGCTCACGTAGTACCTCCAAATTCTATCCCTCGGATTTCTGATCTTTTG
601TGCCAGGTCTATTTCATGAAGTTGGTTGTTCTCACAGTTAGATTGGTATTCTGACAGTTT
661GTTCGCGAAGGAAAAGTTTGACAACTCACCGTGAGGTTTGTCCTCAGCCATAGTGCATTC
721ATATTTAGAATGATCGACTCGTGCATTGGTTAGTCATGCTCATACAATTTTGGTTTTCTT
781GATTTGAGACATGAAAATATATAAAGTTGCGGAGGAATGATTTAGAGATTCCGACTTCAC
841TTTTTGAAAACAACTTTTAAAATTAATTATTCCATTGTTGTTGTTTGTTCAGTTCCCTTG
901TGC
Outer forward primer:>>>>>>>>>>
Outer reverse primer:<<<<<<<<<<
Oligo primer:^^^^^^^^^^
Forward SBE/Allele primer:Blue
Reverse SBE/allele primer:Brown
Target:Red
Included region:Green
excluded region:Orange

Primer3Batch v1.0