Sequence ID: DB094F22_F1.ab1

Motif:(GCT)4
Motif length:3
SSR:GCTGCTGCTGCT
SSR length:12

SSR flanking primers:

OrientationStartLenTmGC%Any3'Primer SeqProduct SizeSeq SizeIncluded SizePair_anyPair_3'
1FORWARD922155.0942.864.001.00AAGGTGAACTCTTCCTTCAAC1498968964.002.00
 REVERSE2402154.3342.865.001.00AAGTCTTCTGGCTCAGTGTAA

Primer view:

1GGCGTCTCGAGGAAGAGAAGAAGCCGTGGTGGCCGAGCTCTTCGCTGGACAGAAGAAGCG
61GCTTGGGAAGATCGCCAAGGAGGCTAGGGCCAAGGTGAACTCTTCCTTCAACAACATGAT
                                 >>>>>>>>>>>>>>>>>>>>>       
121CGGTGCTTCATCTGGGACTACTCGTGGCCGTGGCCGCGGCCGTGGCCGTGGAAGATCACG
181CATTTCCCCGGCGCAGGCACGGGCTGCTGCTGCTGTCAGTTACACTGAGCCAGAAGACTT
                                        <<<<<<<<<<<<<<<<<<<<<
241GCGGGGCGCCCCGAAGAGCATCACGCTTCTAGTGGGCAGATCAAGCATCTGCTTCCTGCG
301ACGTGCTGGGAAGGCGCCAGTGGTGGAGCTGATGGATTCAGAGGAGGAACGAGAGGGACT
361TAGGGAAGAGGAAGAGAATATCCAAGCTATGGAAGCAAGACGCGAGAGGATGAGATCACC
421GGCTGATGATGACGGTCCATCCACGCCGGTGCCGTCAAATGACGACACAAGCTCAGGTGC
481AACTTAAATTTACTAATGAGCTATTATAAGATTAAGGAGTTAATTTTACATGTTCACAGC
541AACTTGCCTTATATGTACCTTTTCAAGATTCAGATTCGAGTGGATTCTGGAAATACTAGC
601TAGGCTCAGCGACATGGCGTGGATTCGGTGAGTACAATTTGACTATTAGAGCTCATCTCA
661AATTTATGCTTATGATCTCATGGTAGTTATTTGCTAGCTACTTCTTGCGACTACTTATGC
721TGCATTAAAATATTTTGGTTTGGCATAATGTTTTTTTATTTAATATTACATTCTTTCTAA
781CTCGACCATATTACATACTTTTTTTATCCGTTCTCTCGGCATCCGTCAATGTTAAGCCTA
841GCCTGTTTTATAATATTTTTATGAAATATTTGGGACACACAAGATATTAGTATCTT
Outer forward primer:>>>>>>>>>>
Outer reverse primer:<<<<<<<<<<
Oligo primer:^^^^^^^^^^
Forward SBE/Allele primer:Blue
Reverse SBE/allele primer:Brown
Target:Red
Included region:Green
excluded region:Orange

Primer3Batch v1.0