Sequence ID: DB091D08_F1.ab1

Motif:(CCTTC)3
Motif length:5
SSR:CCTTCCCTTCCCTTC
SSR length:15

SSR flanking primers:

OrientationStartLenTmGC%Any3'Primer SeqProduct SizeSeq SizeIncluded SizePair_anyPair_3'
1FORWARD1552154.4242.864.000.00CACCTTTCCTTAACTCTTCCT1568958954.002.00
 REVERSE3102154.9542.863.000.00AAGATGTGACTGCCATAGAGA

Primer view:

1TTGTCTGTCACCTCAGGTTCATATCCTTCATCAGCAAGATCTAGAATTGGGGTTTCAGCT
61TTATATGGCGGCGCTGAACTAAAGCTCCTATTGTCCTTGGCAACAGGTCGCTTAGAAGAA
121TTTTCAAGTTCTTCAAGTTGCTTCTCGAGAATGCCACCTTTCCTTAACTCTTCCTCGGCC
                                    >>>>>>>>>>>>>>>>>>>>>    
181TCATCCACCTTCCCTTCCCTTCTCAAGGCTAGGGCCTTCTTTTTCAGCGCTAATAGTTCC
241CTCTGAATTGCCAGCTTACTTTTTGGTGCTGACACAGCACAGGCGTTAATCTCTATGGCA
                                                  <<<<<<<<<<<
301GTCACATCTTCAGTGTGTGCATTTTTCTGTCCTTCTGGAGAGAGGACCTTTGAGTCAGGT
 <<<<<<<<<<                                                  
361TGTTCAGTTTCCAAATCCTTCTCAAGTAGCTTTGCCTTTTTAAGCAATGACATGGCCTCT
421GCAACATTACCAGCCTTCTTGTGAGCAACAGCCTCCCTTTTTAAAGCAAGCACTTGATCC
481TTTAGTGCCTCTTGATTCACAGAATAAAGAGGTCCGTGACTGTCCATTTGTTTGTCATCC
541TCTTCACTCCAGCCAAATGATTTTAGGGCAGCAGCCATATCTGGGTCATTGATGTCATCA
601TCTGTAACATCAAAGTTGCTATCAAAGGCAAGATCATCAGAGCCACCAAGAATTTGTTCA
661AAACTGAAAGCAGGGAAACTCGAATCGTCCAATAGTATGTCATCCTGGTTATCATCATCC
721ATGTTCTGAATAATTGCAGCCAAATCATCATCAGACTCTTCCGCTTCACCCAGAATCTCC
781TGTTCTTCTAGTTGCCCTTTCCAAATTTTAGCCTTCTTTAGTTCTTCTTTTGCTTCAGCA
841AGTCTACCTTCTCGCTTCAGTACTAGGGCTTGTCTCTTCAGAGCATTAACCTGAG
Outer forward primer:>>>>>>>>>>
Outer reverse primer:<<<<<<<<<<
Oligo primer:^^^^^^^^^^
Forward SBE/Allele primer:Blue
Reverse SBE/allele primer:Brown
Target:Red
Included region:Green
excluded region:Orange

Primer3Batch v1.0