Sequence ID: DB090B04_F1.ab1

Motif:(GGAA)3
Motif length:4
SSR:GGAAGGAAGGAA
SSR length:12

SSR flanking primers:

OrientationStartLenTmGC%Any3'Primer SeqProduct SizeSeq SizeIncluded SizePair_anyPair_3'
1FORWARD912155.1142.865.003.00GATTTATAGCGTCCTGGAGAT1688948945.001.00
 REVERSE2582054.2245.004.002.00CAGCACAATAAACACGTACC

Primer view:

1CTGCTAGTGCTAGCGCCTTCTTGGTTACTCTAATTTGTCCCCCTGGGTTCCTTTCTTGGA
61CTGTGGAGTCGTGGGGACGCACTCTGATGCGATTTATAGCGTCCTGGAGATGGTAAAGGC
                                >>>>>>>>>>>>>>>>>>>>>        
121CAAGGGAGGAGGTGTCACAGAGTTCTTGAGTGACGTTTGGGGAAGGAAGGAAGATAAGCC
181CGGGAGGAGTCATGGAGACGAGGGAGACGGAACTAGCTAGTGTGCGTGCCCCGTGCCAGG
                                                           <<
241TACGTGTTTATTGTGCTGGGCGGGGAGGACGGGTGTAGCACGGCACGGCGTGGCTCGAGA
 <<<<<<<<<<<<<<<<<<                                          
301TAAGGCCGGTATTGGCGTTTTCTCCATCAATACCCCAACGGACAACGCCTCGCTCAAACC
361TGGGGGCTGCTGCTCCAACGGTTTTAGGCTTTCAGTTTCAGGGGGCCTAGCTATGCGCCT
421ATACCATGCCGCATTGCCGCCCCAGGGGCGCCGCGTAACGGCGCAAGGCAACGAAGAATT
481AATCCCATGCCAGTCTCCGATCCCTCTTCTGAACTTGCTTTTGGTCGCTGGTCACGAATC
541TCAGATACGGAGTATGTCGCTTTTGCCATTTTTAATTTCGGCTCTTGTTAACCACAGAAC
601CAGTAACCACGCGTCAGGCAATGGTATCAGGCCCGTAGATGGGTATCAGCAGGATGCACG
661ACCGCTCGGGGCCAACAAAATTGTGGGGCCCCAAACTCTGGCATGTAGTCATGCTATTAA
721TCAAGAAAAAAAACAAATGACTTTGCTAATCATGCACGGGAAGGCCACCGGGCCACTCTT
781GACTGCCTCTGCACGGGAAATCGATGTCTCTCCATTGCCTCGCTTGACTCGCCCACGGCC
841TGCCTCCACGGGTCCTCGCCTCCTCCGATCAGCCCCTGCTGGCCTGCTCCCTGC
Outer forward primer:>>>>>>>>>>
Outer reverse primer:<<<<<<<<<<
Oligo primer:^^^^^^^^^^
Forward SBE/Allele primer:Blue
Reverse SBE/allele primer:Brown
Target:Red
Included region:Green
excluded region:Orange

Primer3Batch v1.0