Sequence ID: DB070O21_F1.ab1

Motif:(GATC)3
Motif length:4
SSR:GATCGATCGATC
SSR length:12

SSR flanking primers:

OrientationStartLenTmGC%Any3'Primer SeqProduct SizeSeq SizeIncluded SizePair_anyPair_3'
1FORWARD3672155.2042.864.000.00TATGAACGTAGTAGGGCTGAA1738918914.000.00
 REVERSE5392155.2947.626.003.00GACGAACATGTACTCCTCTGA

Primer view:

1TCCCTCCCAAGGAGTTGACACAAAGTGAAAGGTGTTCTATATATCTATCTATCCATCCAC
61CAGGAATATTATGTATGCATCCACAGCCTCTACATACACTGCGCTTTCTTTTGAAACGAA
121CAGAGCCTAAACTGTCTGTCCCCTTATTTTGACCAGGCCATCCACATCTTTGACTTGTTG
181TCTAGTCCACTTTGAACTTATAGTCTCCCGAACATGTTACTGCAGGGAACTAATTATTAA
241TCCACTTAAACCGGCAGGAATTGTTACCGTGCTTCAATACATAATCGGATGCTTCTACTG
301ACTGATTTTTTTCAGTGGCAATTGATATTATGCTATACTTGTATTGTTGCCTTGTTGGCA
361GTCATGTATGAACGTAGTAGGGCTGAACATGTATGCATTCAAGTTTTGAACCGGAACCTT
        >>>>>>>>>>>>>>>>>>>>>                                
421GGCGCCCGATTCGAGAAGAGGGCTGGGAAAGCAAAAGAAAAGCGCATGCATATATGTGCG
481GCTTTGTGCTTAAAAGGCAGAGATCGATCGATCGATGATCAGAGGAGTACATGTTCGTCT
                                       <<<<<<<<<<<<<<<<<<<<< 
541ATATATAAAACAAAAAGAGAAAAATAAAGGAAGAGATCGAGCAGAGGGAGGAGCAGGAAC
601TTTGGGCATGCATGCATCGGTCTGGTCTGGTGCTGCACTTTGGTCTTTGGTCTTTGGTGC
661CGAAAGAGAAAGAGAAAGACCTCTCCTGGTATCGATCCCTGATGGATGGATGGATGCGAT
721TCTCTTCTCCTTTCCTTTTTTCTCTTTTGGCAGAGATATAGTGTAGCACCTCTCTCCTGG
781TATCCATCCGATTAAAGCCGGCTAAAGAGGTTGATCATGATGAGAATAGAAACAAAACTA
841AAATGTGTACTGATGTCACACGCTTCTTCCGTTGATGCTCTGGATCGATCG
Outer forward primer:>>>>>>>>>>
Outer reverse primer:<<<<<<<<<<
Oligo primer:^^^^^^^^^^
Forward SBE/Allele primer:Blue
Reverse SBE/allele primer:Brown
Target:Red
Included region:Green
excluded region:Orange

Primer3Batch v1.0