Sequence ID: DB081A05_R2.ab1

Motif:(ACAC)5
Motif length:4
SSR:ACACACACACACACACACAC
SSR length:20

SSR flanking primers:

OrientationStartLenTmGC%Any3'Primer SeqProduct SizeSeq SizeIncluded SizePair_anyPair_3'
1FORWARD3661855.4755.564.000.00GGTTAGCACTGACGTGGA2319259253.002.00
 REVERSE5961955.3942.114.002.00GAAAACAAAAGCGAAGCTC

Primer view:

1AGGATCCCAAATTCCCAGCACAAGATATAGAGCAGCTACCAAGTTACGAATTCTAAGACT
61GGATTCAACCTTAGAGTGACGCCAAAACCAAACATTGCATTTCATCGAACAGCTTGCCTA
121CATCTCAGAGGCATTTAAGCAAACACATTGCATCCCAGGGGATGAGGCTTGACTTACAGC
181TTTGCGGGATGGGTTGAGCGCTGCCGTCGAGGAAGAGGCGGAGCGACGCAGCCGGCCGTG
241GTTAGCGCCGTCGAGGGAGAGAGCGGACCGGTGAGAGCTCCGTCGAGGGAGAGACAGAGC
301GGCGGAGCAGCCGCCTGGGCTTAGCTCTGCCGTCGAGGAAGGAGTGGAGCGACGCAGCCC
361ACAGGGGTTAGCACTGACGTGGAGGAAGGGAGGAAGCGCAGCCGCAGCCGGCCGGGGTGA
       >>>>>>>>>>>>>>>>>>                                    
421GCGCCGACGAGGGAGAGAGCCGACCGCCGGTGTGGCGGCTAGGGTCCCTCCTAGAGAGGG
481GCAAACACACACACACACACACACACAAACGCCCACAGCCCACAGGCCTCTTCAGCCGCC
541GTTGCTTGCTGGGCCATGAATCGCGGCCCAAAGTTGGGAGCTTCGCTTTTGTTTTCTGCC
                                      <<<<<<<<<<<<<<<<<<<    
601CTATTTGATTTCTTTCTTCCCCTCAATTTTTTTTTTATTTCTTTCTTTCTTCGCTTTCTT
661TTTTACCAAATGTTTCTGCCGTATATTTGTTTTCTTTTTTCCTTGTACCAAATGTTTTCT
721GCCTTTTTTTCTTTCTCTGACATCTGTACGCATCTCCGCCTTTTTCCTCGAAAAATAAAA
781GAAAGATAACCTTTCAAAACATTGCACTTAATTCTAAACCAAACGTAGCATTGGAAAATT
841AATAGGAGTATACGTTTTTTTCCTATGGCAAGATATTTAGAATAACACTTTAAATATTCC
901CACGGCCACATTTCATCGAACTGCT
Outer forward primer:>>>>>>>>>>
Outer reverse primer:<<<<<<<<<<
Oligo primer:^^^^^^^^^^
Forward SBE/Allele primer:Blue
Reverse SBE/allele primer:Brown
Target:Red
Included region:Green
excluded region:Orange

Primer3Batch v1.0