Sequence ID: DB081A05_R2.ab1

Motif:(TTTC)3
Motif length:4
SSR:TTTCTTTCTTTC
SSR length:12

SSR flanking primers:

OrientationStartLenTmGC%Any3'Primer SeqProduct SizeSeq SizeIncluded SizePair_anyPair_3'
1FORWARD6072055.9140.002.000.00GATTTCTTTCTTCCCCTCAA1459259256.003.00
 REVERSE7512155.2047.624.000.00GCGTACAGATGTCAGAGAAAG

Primer view:

1AGGATCCCAAATTCCCAGCACAAGATATAGAGCAGCTACCAAGTTACGAATTCTAAGACT
61GGATTCAACCTTAGAGTGACGCCAAAACCAAACATTGCATTTCATCGAACAGCTTGCCTA
121CATCTCAGAGGCATTTAAGCAAACACATTGCATCCCAGGGGATGAGGCTTGACTTACAGC
181TTTGCGGGATGGGTTGAGCGCTGCCGTCGAGGAAGAGGCGGAGCGACGCAGCCGGCCGTG
241GTTAGCGCCGTCGAGGGAGAGAGCGGACCGGTGAGAGCTCCGTCGAGGGAGAGACAGAGC
301GGCGGAGCAGCCGCCTGGGCTTAGCTCTGCCGTCGAGGAAGGAGTGGAGCGACGCAGCCC
361ACAGGGGTTAGCACTGACGTGGAGGAAGGGAGGAAGCGCAGCCGCAGCCGGCCGGGGTGA
421GCGCCGACGAGGGAGAGAGCCGACCGCCGGTGTGGCGGCTAGGGTCCCTCCTAGAGAGGG
481GCAAACACACACACACACACACACACAAACGCCCACAGCCCACAGGCCTCTTCAGCCGCC
541GTTGCTTGCTGGGCCATGAATCGCGGCCCAAAGTTGGGAGCTTCGCTTTTGTTTTCTGCC
601CTATTTGATTTCTTTCTTCCCCTCAATTTTTTTTTTATTTCTTTCTTTCTTCGCTTTCTT
        >>>>>>>>>>>>>>>>>>>>                                 
661TTTTACCAAATGTTTCTGCCGTATATTTGTTTTCTTTTTTCCTTGTACCAAATGTTTTCT
721GCCTTTTTTTCTTTCTCTGACATCTGTACGCATCTCCGCCTTTTTCCTCGAAAAATAAAA
           <<<<<<<<<<<<<<<<<<<<<                             
781GAAAGATAACCTTTCAAAACATTGCACTTAATTCTAAACCAAACGTAGCATTGGAAAATT
841AATAGGAGTATACGTTTTTTTCCTATGGCAAGATATTTAGAATAACACTTTAAATATTCC
901CACGGCCACATTTCATCGAACTGCT
Outer forward primer:>>>>>>>>>>
Outer reverse primer:<<<<<<<<<<
Oligo primer:^^^^^^^^^^
Forward SBE/Allele primer:Blue
Reverse SBE/allele primer:Brown
Target:Red
Included region:Green
excluded region:Orange

Primer3Batch v1.0