CMap Home |  Maps |  Map Summaries |  Map Search |  Feature Search |  Matrix |  Map Sets |  Map Types |  Feature Types |  Species |  Saved links |  Help |  Tutorial
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat D-1DS, Ae. tauschii
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps 1DS, Ae. tauschii
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
traitlocus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat D - 1DS, Ae. tauschii [ View Map Set Info ]
Map Name: 1DS, Ae. tauschii
Map Start: 0.00
Map Stop: 45.50
Features by Type:
22 locus
2 traitlocus
24 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 24 of 24.
Wheat D - 1DS, Ae. tauschii - 1DS, Ae. tauschii
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
Xmwg938-1D locus 17.30 Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-1D Xmwg938-1D locus 6.60 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, DR G - Ta-Synthetic/Opata-DR-1D Xmwg938-1D locus -32.10 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-1D Xmwg938-1D locus 12.50 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR- - Ta-Synthetic/Opata-SSR_D-1D Xmwg938-1D locus 7.90 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-1D Xmwg938-1D locus 22.10 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-1D Xmwg938-1D locus 17.60 () Automated name-based, Automated name-based View Maps
Wheat D - 1DS, A.tauschii, AUS x CPI - 1DS-A.tauschii-AUSxCPI Xmwg938-1D locus 5.20 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, gbx - Ta-Synthetic/Opata-gbx-1D Xmwg938-1D locus 14.20 () Automated name-based, Automated name-based View Maps
Xbcd1434-1D locus 6.90 Wheat ABD - Wheat, Synthetic x Opata, gbx - Ta-Synthetic/Opata-gbx-1D Xbcd1434-1D locus 9.70 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-1D Xbcd1434-1D locus 17.10 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-1D Xbcd1434-1D locus 8.20 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR- - Ta-Synthetic/Opata-SSR_D-1D Xbcd1434-1D locus 3.60 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-1D Xbcd1434-1D locus 2.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-1D Xbcd1434-1D locus 13.40 () Automated name-based, Automated name-based View Maps
Xabc156-1D locus 38.30 Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR2-1D Xabc156-1D locus 42.10 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, gbx - Ta-Synthetic/Opata-gbx-1D Xabc156-1D locus 29.40 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-1D Xabc156-1D locus 36.70 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR- - Ta-Synthetic/Opata-SSR_D-1D Xabc156-1D locus 22.60 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-1D Xabc156-1D locus 32.10 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-1D Xabc156-1D locus 26.50 () Automated name-based, Automated name-based View Maps
Gli-D1 locus 9.20 Wheat D - T.tauschii - Tt-Gill-1D Gli-D1 locus 18.30 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, gbx - Ta-Synthetic/Opata-gbx-1D Gli-D1 locus 0.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-1D Gli-D1 locus 4.30 () Automated name-based, Automated name-based View Maps
Xwhs179-1D.1 locus 12.80 Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-1D Xwhs179-1D.1 locus 12.30 () Automated name-based, Automated name-based View Maps
Wheat D - 1DS, A.tauschii, AUS x CPI - 1DS-A.tauschii-AUSxCPI Xwhs179-1D.1 locus 5.20 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-1D Xwhs179-1D.1 locus 9.20 () Automated name-based, Automated name-based View Maps
Xwhs179-1D.2 locus 18.80 Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-1D Xwhs179-1D.2 locus 22.50 () Automated name-based, Automated name-based View Maps
Wheat D - 1DS, A.tauschii, AUS x CPI - 1DS-A.tauschii-AUSxCPI Xwhs179-1D.2 locus 8.60 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-1D Xwhs179-1D.2 locus 15.10 () Automated name-based, Automated name-based View Maps
Xiag95-1D locus 21.80 Wheat D - 1DS, A.tauschii, AUS x CPI - 1DS-A.tauschii-AUSxCPI Xiag95-1D locus 13.80 () Automated name-based, Automated name-based View Maps
XrgaYr10-1D.2 locus 0.00 No other positions
Xdms33-1D locus 0.60 No other positions
Xrga5.2c-1D locus 1.80 No other positions
XrgaYr10-1D.1 locus 6.40 No other positions
Xrga5.2a-1D locus 6.40 No other positions
pic18-1D locus 12.80 No other positions
Xutv1518-1D locus 17.30 No other positions
LrK10-1D locus 21.80 No other positions
Ttrga1-1D locus 21.80 No other positions
Xmwg2021-1D locus 21.80 No other positions
b6-1D locus 21.80 No other positions
Xmwg60-1D locus 24.90 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-1D Xmwg60-1D locus 21.80 () Automated name-based View Maps
Xmwg2083-1D locus 32.90 No other positions
Xcdo388-1D locus 33.00 No other positions
XksuG9-1D locus 45.50 No other positions
Lr21 traitlocus 0.00 Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-1D Lr21 traitlocus 0.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat genes - Triticum-Genes-1D Lr21 traitlocus -40.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Triticeae consensus - Triticeae-Sorrells-1 Lr21 traitlocus 0.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-1D Lr21 traitlocus 0.00 () Automated name-based, Automated name-based View Maps
Sr33 traitlocus 30.70 Wheat ABD - Triticeae consensus - Triticeae-Sorrells-1 Sr33 traitlocus 5.50 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-1D Sr33 traitlocus 25.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-1D Sr33 traitlocus 15.50 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat genes - Triticum-Genes-1D Sr33 traitlocus -27.00 () Automated name-based, Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.