CMap Home |  Maps |  Map Summaries |  Map Search |  Feature Search |  Matrix |  Map Sets |  Map Types |  Feature Types |  Species |  Saved links |  Help |  Tutorial
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Barley-Barley, Consensus 2006, DArT
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Hordeum-Consensus2006-DArT-6H
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Barley - Barley, Consensus 2006, DArT [ View Map Set Info ]
Map Name: Hordeum-Consensus2006-DArT-6H
Map Start: 0.00
Map Stop: 147.10
Features by Type:
362 locus
362 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 362.       of 15 | Next
Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-6H
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
bPb-9696 locus 147.10 No other positions
bPt-6063 locus 146.50 Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-6H bPt-6063 locus 132.70 () Automated name-based View Maps
bPt-5482 locus 146.50 Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-6H bPt-5482 locus 132.70 () Automated name-based View Maps
bPt-5445 locus 146.50 Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-6H bPt-5445 locus 132.80 () Automated name-based View Maps
bPb-9890 locus 144.00 Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-6H bPb-9890 locus 134.90 () Automated name-based View Maps
Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-6H bPb-9890 locus 158.65 () Automated name-based View Maps
bPb-2410 locus 144.00 Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-6H bPb-2410 locus 158.65 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-6H bPb-2410 locus 134.90 () Automated name-based View Maps
bPb-9817 locus 143.80 Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-6H bPb-9817 locus 158.65 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-6H bPb-9817 locus 134.90 () Automated name-based View Maps
bPb-1695 locus 143.80 Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-6H bPb-1695 locus 132.70 () Automated name-based View Maps
bPb-4492 locus 142.50 Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-6H bPb-4492 locus 132.70 () Automated name-based View Maps
bPb-3919 locus 142.50 Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-6H bPb-3919 locus 134.90 () Automated name-based View Maps
bPb-2137 locus 142.50 Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-6H bPb-2137 locus 132.70 () Automated name-based View Maps
bPb-0522 locus 142.50 Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-6H bPb-0522 locus 132.70 () Automated name-based View Maps
bPb-8764 locus 138.00 No other positions
AWBMA20 locus 137.80 Barley - Barley, CxH - Hordeum-CxH-6H AWBMA20 locus 154.47 () Automated name-based View Maps
Barley - Barley, GxH - Hordeum-GxH-6H AWBMA20 locus 188.25 () Automated name-based View Maps
Barley - Barley consensus 2003 - Barley-consensus-2003-6H AWBMA20 locus 127.40 () Automated name-based View Maps
Barley - Barley, CxS - Hordeum-CxS-6H AWBMA20 locus 179.08 () Automated name-based View Maps
bPb-7146 locus 137.80 Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-6H bPb-7146 locus 157.56 () Automated name-based View Maps
bPb-4626 locus 137.80 Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-6H bPb-4626 locus 159.73 () Automated name-based View Maps
bPb-1621 locus 137.80 Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-6H bPb-1621 locus 157.56 () Automated name-based View Maps
bPb-0403 locus 137.80 Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-6H bPb-0403 locus 159.73 () Automated name-based View Maps
bPb-6677 locus 137.70 Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-6H bPb-6677 locus 154.27 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-6H bPb-6677 locus 134.10 () Automated name-based View Maps
bPb-2940 locus 137.70 Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-6H bPb-2940 locus 154.27 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-6H bPb-2940 locus 134.20 () Automated name-based View Maps
bPb-2863 locus 137.70 Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-6H bPb-2863 locus 154.27 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-6H bPb-2863 locus 133.00 () Automated name-based View Maps
bPb-0443 locus 137.70 Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-6H bPb-0443 locus 133.50 () Automated name-based View Maps
bPb-7644b locus 137.70 Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-6H bPb-7644b locus 133.30 () Automated name-based View Maps
bPb-3760 locus 137.70 Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-6H bPb-3760 locus 154.27 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-6H bPb-3760 locus 134.20 () Automated name-based View Maps
bPb-6875 locus 137.60 Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-6H bPb-6875 locus 133.70 () Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.