CMap Home |  Maps |  Map Summaries |  Map Search |  Feature Search |  Matrix |  Map Sets |  Map Types |  Feature Types |  Species |  Saved links |  Help |  Tutorial
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Barley-Barley, Consensus 2006, Stein
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Hv-Consensus2006-Stein-6H
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Barley - Barley, Consensus 2006, Stein [ View Map Set Info ]
Map Name: Hv-Consensus2006-Stein-6H
Map Start: 0.00
Map Stop: 149.70
Features by Type:
117 locus
117 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 117.       of 5 | Next
Barley - Barley, Consensus 2006, Stein - Hv-Consensus2006-Stein-6H
(Click headers to resort)		 Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
GBR0338-6H locus 0.00 Barley - Barley, SxM, Stein2006 - Hv-SxM-Stein-6H GBR0338-6H locus 0.00 () Automated name-based, Automated name-based View Maps
GBR1407-6H locus 0.10 Barley - Barley, SxM, Stein2006 - Hv-SxM-Stein-6H GBR1407-6H locus 0.05 () Automated name-based, Automated name-based View Maps
GBR0389-6H locus 0.90 Barley - Barley, SxM, Stein2006 - Hv-SxM-Stein-6H GBR0389-6H locus 0.94 () Automated name-based, Automated name-based View Maps
GBS0346-6H locus 16.60 Barley - Barley, SxM, Stein2006 - Hv-SxM-Stein-6H GBS0346-6H locus 16.99 () Automated name-based, Automated name-based View Maps
GBS0520-6H locus 20.90 Barley - Barley, SxM, Stein2006 - Hv-SxM-Stein-6H GBS0520-6H locus 21.35 () Automated name-based, Automated name-based View Maps
GBR1243-6H locus 22.10 Barley - Barley, SxM, Stein2006 - Hv-SxM-Stein-6H GBR1243-6H locus 22.61 () Automated name-based, Automated name-based View Maps
GBR1024-6H locus 23.30 Barley - Barley, SxM, Stein2006 - Hv-SxM-Stein-6H GBR1024-6H locus 23.74 () Automated name-based, Automated name-based View Maps
cMWG652a-6H locus 22.70 Barley - Barley, IxF, Stein2006 - Hv-IxF-Stein-6H cMWG652a-6H locus 16.26 () Automated name-based, Automated name-based View Maps
Barley - Barley, SxM, Stein2006 - Hv-SxM-Stein-6H cMWG652a-6H locus 24.09 () Automated name-based, Automated name-based View Maps
Barley - Barley, OWB, Stein2006 - Hv-DxR-Stein-6H cMWG652a-6H locus 0.00 () Automated name-based, Automated name-based View Maps
GBR1394-6H locus 34.00 Barley - Barley, SxM, Stein2006 - Hv-SxM-Stein-6H GBR1394-6H locus 34.00 () Automated name-based, Automated name-based View Maps
GBS0179-6H locus 34.20 Barley - Barley, SxM, Stein2006 - Hv-SxM-Stein-6H GBS0179-6H locus 34.26 () Automated name-based, Automated name-based View Maps
GBR0272-6H locus 34.70 Barley - Barley, SxM, Stein2006 - Hv-SxM-Stein-6H GBR0272-6H locus 34.81 () Automated name-based, Automated name-based View Maps
GBM1355-6H locus 34.80 Barley - Barley, SxM, Stein2006 - Hv-SxM-Stein-6H GBM1355-6H locus 34.83 () Automated name-based, Automated name-based View Maps
GBR1535-6H locus 38.70 Barley - Barley, OWB, Stein2006 - Hv-DxR-Stein-6H GBR1535-6H locus 18.18 () Automated name-based, Automated name-based View Maps
Barley - Barley, SxM, Stein2006 - Hv-SxM-Stein-6H GBR1535-6H locus 41.93 () Automated name-based, Automated name-based View Maps
GBM1053-6H locus 54.10 Barley - Barley, SxM, Stein2006 - Hv-SxM-Stein-6H GBM1053-6H locus 53.04 () Automated name-based, Automated name-based View Maps
GBS0652-6H locus 54.10 Barley - Barley, SxM, Stein2006 - Hv-SxM-Stein-6H GBS0652-6H locus 53.10 () Automated name-based, Automated name-based View Maps
GBM1212-6H locus 54.20 Barley - Barley, SxM, Stein2006 - Hv-SxM-Stein-6H GBM1212-6H locus 53.12 () Automated name-based, Automated name-based View Maps
GBM1319-6H locus 54.20 Barley - Barley, SxM, Stein2006 - Hv-SxM-Stein-6H GBM1319-6H locus 53.13 () Automated name-based, Automated name-based View Maps
GBS0881-6H locus 54.70 Barley - Barley, SxM, Stein2006 - Hv-SxM-Stein-6H GBS0881-6H locus 53.83 () Automated name-based, Automated name-based View Maps
GBR1579-6H locus 57.00 Barley - Barley, SxM, Stein2006 - Hv-SxM-Stein-6H GBR1579-6H locus 56.35 () Automated name-based, Automated name-based View Maps
GBS0683-6H locus 59.10 Barley - Barley, SxM, Stein2006 - Hv-SxM-Stein-6H GBS0683-6H locus 58.02 () Automated name-based, Automated name-based View Maps
GBS0468-6H locus 59.50 Barley - Barley, SxM, Stein2006 - Hv-SxM-Stein-6H GBS0468-6H locus 58.37 () Automated name-based, Automated name-based View Maps
GBS0164-6H locus 59.50 Barley - Barley, SxM, Stein2006 - Hv-SxM-Stein-6H GBS0164-6H locus 58.38 () Automated name-based, Automated name-based View Maps
GBS0852-6H locus 59.90 Barley - Barley, SxM, Stein2006 - Hv-SxM-Stein-6H GBS0852-6H locus 58.82 () Automated name-based, Automated name-based View Maps
GBR1441b-6H locus 65.60 Barley - Barley, SxM, Stein2006 - Hv-SxM-Stein-6H GBR1441b-6H locus 64.34 () Automated name-based, Automated name-based View Maps
GBS0325-6H locus 65.90 Barley - Barley, SxM, Stein2006 - Hv-SxM-Stein-6H GBS0325-6H locus 64.65 () Automated name-based, Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.