CMap Home |  Maps |  Map Summaries |  Map Search |  Feature Search |  Matrix |  Map Sets |  Map Types |  Feature Types |  Species |  Saved links |  Help |  Tutorial
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Barley-Barley, Integrated, Marcel 2009
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Hv-Integrated2009-2H
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
locus
qtl
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Barley - Barley, Integrated, Marcel 2009 [ View Map Set Info ]
Map Name: Hv-Integrated2009-2H
Map Start: 0.00
Map Stop: 155.60
Features by Type:
1,225 locus
14 qtl
1,239 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 1,239.       of 50 | Next
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-2H
(Click headers to resort)		 Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
bPt-8775 locus 59.60 Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-2H bPt-8775 locus 64.60 () Automated name-based View Maps
bPb-4718 locus 66.40 Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-2H bPb-4718 locus 69.60 () Automated name-based View Maps
bPb-3056 locus 59.20 Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-2H bPb-3056 locus 70.80 () Automated name-based View Maps
Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-2H bPb-3056 locus 70.58 () Automated name-based View Maps
bPb-6881 locus 59.20 Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-2H bPb-6881 locus 70.58 () Automated name-based View Maps
Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-2H bPb-6881 locus 70.80 () Automated name-based View Maps
bPb-1836 locus 65.50 Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-2H bPb-1836 locus 72.75 () Automated name-based View Maps
Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-2H bPb-1836 locus 71.00 () Automated name-based View Maps
bPt-4471 locus 66.70 Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-2H bPt-4471 locus 71.00 () Automated name-based View Maps
bPt-5796 locus 64.80 Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-2H bPt-5796 locus 71.00 () Automated name-based View Maps
bPb-5439 locus 69.10 Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-2H bPb-5439 locus 71.10 () Automated name-based View Maps
bPb-7039 locus 69.10 Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-2H bPb-7039 locus 71.10 () Automated name-based View Maps
CDO474a locus 78.60 Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-2H CDO474a locus 71.20 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-2H CDO474A locus 84.06 () Automated name-based View Maps
Barley - Barley consensus 2003 - Barley-consensus-2003-2H CDO474A locus 69.40 () Automated name-based View Maps
Barley - Barley, BinMap 2005 - Hordeum-Bins-3H CDO474A locus 178.00 () Automated name-based View Maps
bPb-2219 locus 61.50 Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-2H bPb-2219 locus 71.40 () Automated name-based View Maps
bPb-3677 locus 61.90 Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-2H bPb-3677 locus 71.40 () Automated name-based View Maps
bPb-8700 locus 67.40 Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-2H bPb-8700 locus 72.10 () Automated name-based View Maps
bPt-6117 locus 69.00 Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-2H bPt-6117 locus 72.10 () Automated name-based View Maps
bPb-3575 locus 60.10 Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-2H bPb-3575 locus 72.50 () Automated name-based View Maps
GBM1232 locus 64.80 Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-2H GBM1232 locus 72.16 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-2H GBM1232 locus 72.16 () Automated name-based View Maps
Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-2H GBM1232 locus 77.40 () Automated name-based View Maps
GBMS160 locus 70.10 Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-2H GBMS160 locus 77.40 () Automated name-based View Maps
Barley - Barley, Steptoe x Morex, SSR - Hordeum-SxM-SSR-2H GBMS160 locus 85.40 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-2H GBMS160 locus 75.31 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-2H GBMS160 locus 75.31 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-2H GBMS160 locus 75.31 () Automated name-based View Maps
bPt-3082 locus 73.60 Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-2H bPt-3082 locus 82.30 () Automated name-based View Maps
bPb-9754 locus 68.80 Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-2H bPb-9754 locus 82.80 () Automated name-based View Maps
Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-2H bPb-9754 locus 82.58 () Automated name-based View Maps
bPt-0858 locus 74.50 Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-2H bPt-0858 locus 83.10 () Automated name-based View Maps
bPt-4657 locus 73.70 Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-2H bPt-4657 locus 83.10 () Automated name-based View Maps
bPt-4848 locus 74.50 Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-2H bPt-4848 locus 83.10 () Automated name-based View Maps
bPt-5317 locus 74.40 Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-2H bPt-5317 locus 83.10 () Automated name-based View Maps
bPt-6088 locus 74.40 Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-2H bPt-6088 locus 83.10 () Automated name-based View Maps
bPt-9686 locus 74.50 Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-2H bPt-9686 locus 83.10 () Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.