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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Barley-Barley, IxT/QTL
(Reference Set)
Min.
Correspondences
Align Vertically
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Maps Hordeum-IxT/Q-7H
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Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
chromband
locus
qtl
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Barley - Barley, IxT/QTL [ View Map Set Info ]
Map Name: Hordeum-IxT/Q-7H
Map Start: -74.50
Map Stop: 128.00
Features by Type:
1 chromband
14 locus
3 qtl
18 Total

Map Features

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Items 1 to 18 of 18.
Barley - Barley, IxT/QTL - Hordeum-IxT/Q-7H
(Click headers to resort)		 Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
Xpsr105 locus 14.70 Wheat ABD - Wheat, Physical - Ta-Physical-Gill-7ABD Xpsr105 locus 37.00 () Automated name-based, Automated name-based View Maps
Barley - H. bulbosum, PB1 x PB11 - Hbulbosum-PB1xPB11-7 Xpsr105 locus 41.00 () Automated name-based, Automated name-based View Maps
Xmwg539 locus 81.60 Rye - Rye, P87 x P105, update - Secale-PxP-update-4R Xmwg539 locus 117.70 () Automated name-based, Automated name-based View Maps
Rye - Rye, P87 x P105 - Secale-PxP-4 Xmwg539 locus 120.50 () Automated name-based, Automated name-based View Maps
Xpsr56 locus 50.40 Rye - Rye, UC90 x E-line - Secale-UxE-7 Xpsr56 locus 54.60 () Automated name-based, Automated name-based View Maps
Rye - Rye, Ds2 x RxL10 - Secale-Devos-7R Xpsr56 locus 8.80 () Automated name-based, Automated name-based View Maps
Rye - Rye, Ds2 x RxL10 - Secale-Devos-3R Xpsr56 locus 0.00 () Automated name-based, Automated name-based View Maps
Xpsr108 locus -1.90 Barley - H. bulbosum, PB1 x PB11 - Hbulbosum-PB1xPB11-7 Xpsr108 locus 43.00 () Automated name-based, Automated name-based View Maps
Barley - Barley, BxGP - Hordeum-Laurie1-2H Xpsr108 locus 29.00 () Automated name-based, Automated name-based View Maps
Barley - Barley, IxT/QTL - Hordeum-IxT/Q-2H Xpsr108 locus -39.60 () Automated name-based View Maps
Rye - Rye, UC90 x E-line - Secale-UxE-4 Xpsr108 locus 85.70 () Automated name-based, Automated name-based View Maps
Barley - Barley, IxT - Hordeum-Laurie5-2H Xpsr108 locus 19.80 () Automated name-based, Automated name-based View Maps
Xpsr121 locus 105.60 No other positions
Xpsr604 locus -51.30 Rye - Rye, UC90 x E-line - Secale-UxE-4 Xpsr604 locus 31.00 () Automated name-based, Automated name-based View Maps
Rye - Rye, Ds2 x RxL10, RAPD - Secale-DxR-RAPD-4R Xpsr604 locus 82.30 () Automated name-based, Automated name-based View Maps
Rye - Rye, Ds2 x RxL10 - Secale-Devos-4R Xpsr604 locus 14.30 () Automated name-based, Automated name-based View Maps
Xmwg89 locus -51.30 Wheat ABD - Wheat, Physical - Ta-Physical-Gill-7ABD Xmwg89 locus -67.00 () Automated name-based, Automated name-based View Maps
Barley - H. bulbosum, PB1 x PB11 - Hbulbosum-PB1xPB11-7 Xmwg89 locus 33.00 () Automated name-based, Automated name-based View Maps
Rye - Rye, P87 x P105, update - Secale-PxP-update-4R Xmwg89 locus 76.50 () Automated name-based, Automated name-based View Maps
Xpsr148 locus 110.20 Barley - H. bulbosum, PB1 x PB11 - Hbulbosum-PB1xPB11-7 Xpsr148 locus 88.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-7A Xpsr148 locus 207.00 () Automated name-based, Automated name-based View Maps
Rye - Rye, Ds2 x RxL10 - Secale-Devos-6R Xpsr148 locus 105.80 () Automated name-based, Automated name-based View Maps
Xbcd129 locus -68.30 Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-4A Xbcd129 locus 181.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-7D Xbcd129 locus 17.00 () Automated name-based, Automated name-based View Maps
Xpsb95 locus -74.40 No other positions
XBCD351A locus 1.80 No other positions
Xpsb52 locus 43.00 No other positions
XCDO583D locus 62.00 No other positions
XBCD512A locus 107.20 No other positions
eps7S spring qtl -74.50 - -11.50 No other positions
eps7L spring qtl 93.50 - 128.00 No other positions
eps7L autumn qtl 93.50 - 128.00 No other positions
Centromere chromband -1.90 - 1.80 No other positions

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