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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Barley-Barley, Lx41
(Reference Set)
Min.
Correspondences
Align Vertically
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Maps Hordeum-Lx41-6H
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Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Barley - Barley, Lx41 [ View Map Set Info ]
Map Name: Hordeum-Lx41-6H
Map Start: 0.00
Map Stop: 21.80
Features by Type:
2 locus
2 Total

Map Features

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Items 1 to 2 of 2.
Barley - Barley, Lx41 - Hordeum-Lx41-6H
(Click headers to resort)		 Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
HVM31 locus 21.80 Barley - Barley, LxHs - Hordeum-LxHs-6H HVM31 locus 103.00 () Automated name-based, Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-6H HVM31 locus 72.81 () Automated name-based, Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-6H HVM31 locus 60.90 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-6 HVM31 locus 72.81 () Automated name-based View Maps
Barley - Barley, OWB - Hordeum-OWB-6H HVM31 locus 68.70 () Automated name-based, Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-6H HVM31 locus 72.82 () Automated name-based, Automated name-based View Maps
Barley - Barley, OWB, SNP - Hordeum-OWB-SNP-6H HVM31 locus 68.68 () Automated name-based, Automated name-based View Maps
Barley - Barley, Lina x H.spont, SNP - Hordeum-LiHs-SNP-6H HVM31 locus 18.24 () Automated name-based, Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-6H HVM31 locus 60.00 () Automated name-based View Maps
Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-6H HVM31 locus 64.13 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-6H HVM31 locus 60.90 () Automated name-based, Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-6H HVM31 locus 60.90 () Automated name-based View Maps
Barley - Barley, HN x H602, Sato2009 - Hv-HNxH602-6H HVM31 locus 94.70 () Automated name-based View Maps
Barley - Barley, OWB, 2004 - Hordeum-OWB-2004-6H HVM31 locus 64.00 () Automated name-based, Automated name-based View Maps
Barley - Barley, OWB, 2005 - Hordeum-OWB-2005-6H HVM31 locus 68.00 () Automated name-based, Automated name-based View Maps
HVM74 locus 0.00 Barley - Barley, IxF - Hordeum-Graner2-6H HVM74 locus 66.00 () Automated name-based, Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-6H HVM74 locus 62.66 () Automated name-based, Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-6H HVM74 locus 70.68 () Automated name-based, Automated name-based View Maps
Barley - Barley, Steptoe x Morex, SNP - Hordeum-StMo-SNP-6H HVM74 locus 61.74 () Automated name-based, Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-6H HVM74 locus 62.66 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-6 HVM74 locus 70.68 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-6H HVM74 locus 61.10 () Automated name-based View Maps
Barley - Barley, L94 x Vada, 2006 - Hv-L94/Vada-2006-6H HVM74 locus 60.75 () Automated name-based, Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-6H HVM74 locus 70.68 () Automated name-based, Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-6H HVM74 locus 62.66 () Automated name-based View Maps
Barley - Barley consensus 2003 - Barley-consensus-2003-6H HVM74 locus 18.80 () Automated name-based, Automated name-based View Maps

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