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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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 Map Options
Map Set Barley-Barley, OPA 2011, Consensus
(Reference Set)
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Correspondences
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Maps Hordeum-OPAConsensus-2011-5H
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Barley - Barley, OPA 2011, Consensus [ View Map Set Info ]
Map Name: Hordeum-OPAConsensus-2011-5H
Map Start: 0.00
Map Stop: 189.89
Features by Type:
540 locus
540 Total

Map Features

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Items 1 to 25 of 540.       of 22 | Next
Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-5H
(Click headers to resort)		 Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
POPA1_0024 locus 96.12 No other positions
POPA1_0045 locus 123.78 No other positions
POPA1_0058 locus 42.41 No other positions
POPA1_0080 locus 143.29 No other positions
POPA1_0094 locus 114.14 No other positions
POPA1_0095 locus 132.32 No other positions
POPA1_0104 locus 141.88 No other positions
POPA1_0116 locus 41.45 No other positions
POPA1_0127 locus 68.21 No other positions
POPA1_0146 locus 124.43 No other positions
POPA1_0157 locus 42.41 No other positions
POPA1_0161 locus 155.45 No other positions
POPA1_0167 locus 71.93 No other positions
POPA1_0177 locus 42.41 No other positions
POPA1_0183 locus 67.66 No other positions
POPA1_0217 locus 149.94 No other positions
POPA1_0236 locus 172.83 No other positions
POPA1_0240 locus 42.41 No other positions
POPA1_0252 locus 42.41 No other positions
POPA1_0254 locus 169.72 No other positions
POPA1_0260 locus 38.78 No other positions
POPA1_0292 locus 139.63 No other positions
POPA1_0310 locus 183.14 No other positions
POPA1_0318 locus 42.41 No other positions
POPA1_0336 locus 157.61 No other positions

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